Sinocyclocheilus rhinocerous: 107721302
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Entry
107721302 CDS
T04916
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107721302 (taf1b)
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
107721302 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
N36
Motif
Other DBs
NCBI-GeneID:
107721302
NCBI-ProteinID:
XP_016384726
UniProt:
A0A673N2S5
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MDEQLTGGYSEPCGQCAAVNWGVSDEGQFFCRSCHNVIEKTREVVDVNTLHSKHSRISQI
TRPKKKRQENEREWMICEGFQFILKHQAKALVSLGVCMKFETEVLWNFWKRYLQNTQQAF
TRNPVYTPRFTVFMKSQSDSESNAQSEQSYHTEVASEMSEEMSVSGYSSEAQSSVCSGSL
DAVVYQNMKGTRMHNLMTMPRTLALCYLALLWVREAITLADLLRMVSERCIPYMNIHEAF
PAELSLFGKDVQFFNVRYLPSYSLVHKEAVTLARILQLPSFPTVSKDCLLHPFPLTVRYL
LEANLPNDLHVWVHKVIRQAAMEDSSFLTFEPSKEKPHLLRYDIQAVAVIIVTLKLLFKL
DDHVEWKLSEEAAKKKKKKLFKLKKWFDVVQPVLEQARKREEREEAQRQWGTTKPFITSL
KRKSAVLKKRRVAKHLEQKFQKFTDSAPEQSSSLTNPHASFHFSWGKEEGSDGPSMYKKR
LDCTLKKDGFKYLCNRKYWHPELRLCPRRTCGDHFSKIEPSLPRMYVWVLDLFSFILGVR
QAEVHKEVLSVERRFLKRNHQPKIQWTLTSCKNKKKRSKTATHVVRKKTRVHDENITGV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacagcttactggtggatacagtgagccatgcggccagtgcgctgctgtgaac
tggggcgtgtcggatgagggtcagttcttctgcaggagctgccacaatgtgatcgagaaa
acgagggaggtggtggatgtgaacacccttcatagtaaacacagcaggatctcacaaata
acaagacccaaaaagaaaagacaagagaatgagcgagagtggatgatatgtgagggattt
cagttcatcttgaaacaccaggccaaggctttggtcagtcttggtgtctgcatgaagttt
gagacagaagttttgtggaatttctggaagagatacctgcagaacacacagcaagctttc
accagaaatccagtgtacactccaaggtttacggtgttcatgaagtcacagagtgattcg
gagtctaacgctcaaagtgagcagtcgtatcacaccgaagttgcttcagagatgtcagaa
gagatgtcagtctcaggttactccagtgaggcacagtcatcagtatgttcagggtctttg
gatgccgttgtgtaccaaaatatgaagggaacaagaatgcacaatcttatgaccatgcca
cggacactggccctgtgctatctggctctgctgtgggtccgagaggccatcactctggct
gacttactgaggatggtctcagagaggtgtattccttacatgaacattcatgaggcattt
ccagcggagctgagtctgttcggaaaagatgtccagttctttaatgttcggtaccttccg
tcctactcgctggttcataaagaagctgtgactctggctcggatcttgcaattaccctcc
ttcccaacagtttcgaaggattgccttctccacccgtttccgctcactgtccgctatctg
ttggaggcaaacctcccaaatgaccttcatgtttgggtccacaaggttataagacaggct
gctatggaggacagctcttttctgacctttgaacccagcaaggagaagcctcatctcttg
cgctatgacattcaagcagtagctgtcatcattgtcaccttgaagctccttttcaagttg
gatgatcatgtggagtggaagttatctgaggaagcagccaagaagaagaaaaagaaactt
ttcaagttaaaaaagtggtttgatgttgtacaaccagtcttggagcaagccagaaagagg
gaagaacgagaggaagctcaacggcaatggggaaccactaagcctttcattacatctttg
aaacgcaagagcgcggttctgaaaaaaaggcgcgttgctaaacatttggagcagaaattt
cagaagtttactgactctgcaccagaacaatcgtcttccttaacaaaccctcatgccagc
tttcacttcagctggggaaaagaggaaggttcggatggacccagtatgtataagaaacgt
ttggactgtacccttaagaaagacgggttcaagtacctctgcaaccgaaaatactggcat
cctgaactgagattatgcccacgcaggacgtgtggggatcatttctcaaaaatagagccc
agtttgcccaggatgtacgtgtgggtcctggatctcttctctttcattctgggagtccgt
caggcagaagtgcacaaagaggttctcagcgttgaacgtcgttttttgaaaaggaatcat
cagcccaagattcaatggactttaacttcctgcaaaaataagaaaaaaaggtccaaaacc
gcaacccatgttgttagaaagaaaacccgtgttcatgacgagaatatcactggagtatga
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