Sinocyclocheilus rhinocerous: 107721400
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Entry
107721400 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107721400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107721400
03036 Chromosome and associated proteins [BR:
srx03036
]
107721400
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107721400
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107721400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
107721400
NCBI-ProteinID:
XP_016384882
LinkDB
All DBs
Position
Unknown
AA seq
1631 aa
AA seq
DB search
MKEYESKSLEELRFEDYQAGRKGPSNPMAAGTGGLFGAAATATPSTGTGLFGSSTPNTGF
SFGQNKTSFGTSTGAFGTTTGSLFGQPQQQQQQQQQQQQQQQQQQGSSLFKPFGSATTTQ
NNTFSFGNSSSMGLFGNTAASQAGGLFGNTNTSTATGFGTGIFGQTNTGFGNVGTQNLFG
NKPAGFGATTTSAPSFGTGTGLFANKPTLTLGTNTNSSTFGFGATGTGVGLFGSKTATTG
LGTGLGTGFGGAVGTGQTSLFGNNQNKLGSTLGSVGTFGTGGFNTGANTLNFGAPQQPVA
LTDPNASAAQQAVLQQQINALAYSPFGDSPLFRNPLSDPKKKEERLKPTNPAAQKALTTP
TQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEPSLNNGAFMPRKSIKKLVLKNLNN
SSLYNSSVHREADDLASPSEYPQNGLGLSMDEGETREVTVERSGEDDLEVSKFYTNPITK
PIPHAQPSPLLQDTISEFNMRGTASHRNGLEASSEDISLAEDSIQEERDEELEALKPPHP
AGIVLARVGYYTIPSMEELGRMLNENGECIVENFTVGRKGYGSVFFSGEVNLTNMNLDEI
VHFRRKEIIVYPDDKDKPPAGEGLNGRAEVTLDGVWPNDKTTCSQIKSLERLTEMNYEGR
LEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQESDEEEEVPPAKLDLKKLKTGVPPG
IPQLPLTQQQMAPQAQSTAVLELLSRVLELDSDMADITQEHPADSVLGEEDGERTLEEKL
RSETPAEHEPVSASSQIASSMGINPHTLQIMKASLFADXXXXVCVCVIYIYIYIYIYIKY
NLHTCGKYTSXKHVXYCGFSITVGALLQTKFTSGGGLFSQFPEAPFSGIPQKLSKSLASE
SPWPSLGPSFLLPAPPPEPTLRTVGARRLGGPVPLESSITLGKGHLLMDAALFRGRSFRV
GWGPNWTLVHCGDQLSVTEAIKEQSAEIMGFGFLPKPTKSKPITESPFKVRMEQVVGLEP
KQSAESLALYHRPLEIGLKHSTINTEDYCPFIQPAKGVDALHGYAEWIMEVNKDIGGGDA
CLAHWRQVWTLCAALWGRLGDWDVETEQYSDYQQQLERRRSFSHWLSECAAECIEEEVGR
ALQRSHAEAIFSYLTGHCISKACKLSQKSGDHRLALLLSQAVGSKFCRDLLALQLSDWNS
MQTDSFIEEDRLRIFALLAGKPVWQSTDSCINVCSELDWKRCVAVHLWYMLPPTASVADA
LAKYESAFRGSEEVKRYACPPLPPYVDELELLGLDEEMDETESKKPLYDICFHLLKLYSD
RHYSLQQLLDPSTVTADHLDYRLSWHLWNVLQALNYNHLSTSCQGLLHASYAAQLESAGL
WEMAIFVLLHIPDSGRRESAVREMLNLHCSLEETEESMEKEQFLTEKLLIPIQWIHQAKA
IRACRGGDKRSEALHLFKAGHWNHCHRLVIQHLASDCIINDNHKYLLEFLEGLAVPERSV
KIQDWDTSGRVYLDYIHVIQTLQDIQQMESPGYELERLHTEVTSLCSRIERLPCSKAKDR
LAQSEMAKRVANILRVVLSLQQGGEGTPDPRHIPLCQLAPHIGRLPMPEDYALEELRSLT
QSYLQEYVISH
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatacgagagcaaatcccttgaggaattaaggtttgaggattaccaggcagga
aggaagggtccttccaaccccatggcagctggcacgggtggcctctttggtgcagcagcc
acagctactcccagtactggcactggactctttggatcctcaactccaaacactggcttc
agcttcggccagaacaagacctcatttggcacaagcaccggggcctttggtacaactaca
ggaagtttgtttggccagccacaacagcaacagcaacaacaacagcaacaacaacaacaa
caacaacaacagcaaggttccagtctcttcaaaccatttggctcagctaccaccacccaa
aacaacactttctcctttggcaacagcagcagcatggggctgtttggcaacacggctgcc
tctcaggctggaggactgtttggaaacactaacacaagtacggccacaggcttcggcaca
ggaattttcggccaaacgaacactggctttgggaatgtgggaacacagaatctttttggt
aataagcctgcaggatttggcgccaccacaactagcgcaccctcctttggaacaggcact
ggtctgtttgcaaataagcctacgcttactctagggactaacacaaactcctcaaccttt
ggatttggtgcaactggtactggtgtgggtctctttgggagcaaaactgctacgacaggc
ctgggaacaggactgggaactggctttggaggagctgtaggaactggccagacgtcattg
tttgggaacaaccagaacaagctgggctccaccctaggctcagtgggcaccttcgggact
ggaggcttcaacactggagccaacactctgaattttggtgctcctcaacagcctgtggct
ctgactgaccctaatgcatcagctgcgcagcaggctgtcctccaacagcagatcaatgca
ttggcctactctccttttggagactcacccctcttcagaaatccactgtcagacccaaag
aagaaggaagagcgtctgaagcccacaaatccagctgcccagaaagccctgactacccct
actcagtacaaactgacccctcgtcctgccacccgtgttcgtcccaaagctctgtcctcc
tcaggctcctccaaatctcagctctttgatggacttgatgatgatgaaccctctcttaac
aatggagccttcatgcctaggaagagcataaagaagcttgttttgaagaatctgaataac
agcagtctgtataacagctctgtgcacagagaggctgatgacttggcctctccttcagaa
tacccacaaaacggactcggtctgagtatggatgaaggagagaccagagaagtaactgtg
gagagaagtggggaggatgatctggaggtctccaagttctacacaaacccgatcaccaaa
ccaattccacacgcccagccgagccccttgctacaggacacaatctctgagttcaacatg
cggggaactgccagtcatcgcaatggcctggaggccagcagcgaggacatctctctagca
gaggattccattcaggaggagagagatgaggagctggaggctctgaaacctcctcaccca
gctggtatagttcttgcccgtgtgggctactacaccatcccatcaatggaagagctggga
aggatgttgaatgagaatggggaatgtattgtggagaacttcactgtcggcaggaaaggc
tatggatcagttttcttctctggtgaagtgaatcttaccaacatgaacctggatgagatt
gtgcacttcaggcgtaaggagataattgtgtaccctgatgacaaagacaagcctcctgct
ggagagggactaaacggacgtgctgaggtgactctagatggtgtgtggcccaatgacaag
acaacatgctctcagattaagagtctagagaggctgactgagatgaactacgagggccgg
cttgaggcagcctcgcgtaaacagggtgcccgcttcttggaataccgacccgaaactggc
tcctgggtctttgaggtggcccacttctcaaagtatggactccaggaatctgatgaagaa
gaggaagtccccccggcaaagcttgatctgaagaagctgaagacgggtgttccacctggg
atcccacagcttccgctgacccagcagcagatggcaccacaggctcagagtacagcagtt
cttgagctgctcagccgtgtgttggagttggacagtgacatggctgacattacacaagaa
cacccggcagacagtgttttgggtgaggaggatggagagagaactttggaggagaagctg
agatctgagactcctgctgagcacgagccagtgtctgcatcgagtcagattgcttcctca
atgggcatcaaccctcataccttacagatcatgaaggcctctctctttgcagacgnnnnn
nnnnntgtgtgtgtgtgtgttatatatatatatatatatatatatatatatataaaatac
aatttacatacttgtgggaagtatacttcttgaaaacatgtctgatattgtggcttttct
atcacagttggagcccttttacaaaccaaattcacctcaggaggaggacttttttcccag
tttccagaggctccttttagtggaatacctcagaagcttagcaagtcactagcatcagaa
tctccatggccatcattgggtccttccttcctgttgccggcccctcctccagaacctact
cttcgaactgtgggggcccgcaggctaggggggccagtccctctggagagctccataact
ctaggaaaaggccatctgctgatggatgctgctttgttcagagggcgatctttcagagtt
ggctggggtcccaactggacactggtgcactgtggagatcaacttagtgtcacagaggca
attaaggagcagtcggcagagatcatgggatttggcttcttacccaaacctaccaaaagc
aaaccgatcactgaaagtccatttaaagtgcgtatggagcaggtggtcggcctggagccc
aaacagtcagcagagagccttgctctgtatcacagaccactggagatcggtctaaagcac
agcacaatcaacacagaggactactgtcccttcatccagccagcaaaaggagtggatgct
ctgcatggttatgcagagtggattatggaagtcaacaaagatataggaggaggtgatgct
tgtctggcccattggcgccaagtttggaccttgtgtgctgctctttggggccgtcttggt
gactgggatgtggagactgagcaatactccgattaccagcagcagcttgagaggcggagg
agtttctcgcactggctctctgagtgtgcggctgaatgcattgaggaggaggtgggccga
gcccttcagcgcagccatgctgaggccatattcagttaccttaccggccactgcataagc
aaggcctgcaaattgtcccagaagagtggggaccatcgtcttgctctgttattgtctcag
gctgttggctctaagttttgtagagatctattggctctgcagctcagtgactggaacagc
atgcagacggactccttcatagaggaggacaggctgcgaatatttgctttgcttgcagga
aaaccagtgtggcagtcaacagacagttgtataaacgtgtgctccgagcttgattggaag
cggtgtgttgctgtccatctctggtacatgctgcctcccactgcatctgtagctgatgca
ctcgccaaatatgaatctgcgtttcggggttcagaggaagtgaaaaggtatgcttgccct
cctttacctccttacgtagatgaactcgagttgttgggtttggatgaagagatggatgag
actgaatccaaaaagccactctatgacatctgcttccacctgctcaaactttacagtgac
aggcactatagcctacaacagctacttgatcccagcacagtaactgctgatcatctggac
taccggctgagctggcacctgtggaatgtattgcaggctcttaactacaaccacctgtcc
acctcatgccagggcttgctgcatgccagctatgctgcccagctggagagtgcgggatta
tgggagatggcaatcttcgtgctgctgcacatacctgactctgggcgtagagagagtgca
gtgagagagatgctcaacttgcattgctcccttgaggagacggaagaatcaatggagaaa
gagcagtttctcacggaaaagttgctgatccccatccagtggatccatcaggccaaggcc
atccgtgcttgtagagggggagacaaacgtagtgaggctttgcaccttttcaaggccggc
cattggaatcactgccatcggcttgtcatccagcacttggcctcagactgcatcattaat
gataatcataagtaccttctggaattcctagaggggttagcagtgccagagcgcagtgtt
aagattcaggactgggacacgtctggacgagtctaccttgattacatccatgtcattcag
acgctgcaggacatccaacagatggaaagcccaggttatgagctggagcgactgcataca
gaggtgacgtctctgtgcagtagaatagagcgcctcccttgctccaaagcaaaagaccga
cttgcacaatcagagatggccaaacgtgtggctaacatccttcgggtggtcttgagtctc
cagcaaggtggtgaaggcaccccagatccccgacacatccctctttgccagcttgctcca
cacattggacgtctacccatgccagaggactatgctttagaggaactccgcagccttact
cagtcgtacctgcaagagtatgttatcagtcactga
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