Sinocyclocheilus rhinocerous: 107721635
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Entry
107721635 CDS
T04916
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107721635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107721635
Spliceosome [BR:
srx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107721635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Ge1_WD40
WD40_like
WD_LRWD1
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
107721635
NCBI-ProteinID:
XP_016385227
UniProt:
A0A673LT98
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MTTYCAAASPRRVVVFVDSTHSISYKQPVFKGSYLCVCESIKVEKMSDEDEAPVVKKARI
FYGSLEEKEKERLRREGISAAARDAVKAGIEAGNINISSGESMEMEERVSERQAEVLAEF
ERRKRARQITVSTDDVEVKACLRALGEPITLFGEGPAERRERLRNILSVVGPDALKKSKK
EDEKAKRTHEYQQTWYHEGPSFLKEARVWLAKYSLPRAVERLDAARAHKEIPESTRTVKQ
QELHKALRNVNNFCSQIGDDRPISHCQFSPNSKLLVTASWSGLCKLWKVPDCTLVRTLRG
HNTNVGAISFHPQATLTLEESDVNMASCAVDGSVKLWSLDSDEPVADIEGHSMRVARVAW
HPSGRFLGTTCYDNSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDAFARV
WDLRTGRCIMFLEGHHKEIYSINFSPNGFHVATGSGDNTCKVWDLRQRRCMYTIPAHENL
VSSVKFQPNDGHFLLTGAYDNIAKVWTHPGWSPLKTLAGHEGKVMGLDLSPDGQLIATCS
YDRTFKLWMSE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatactgcgcggcggctagcccccgtcgtgtggtcgtgtttgtagacagtaca
cattcgatttcatataaacaacctgtttttaaaggaagctatttgtgcgtttgtgaaagc
ataaaggttgaaaagatgtcggatgaagacgaagctccagttgtgaaaaaggccaggatc
ttctatggaagccttgaagaaaaggagaaggagcgcctcagacgcgaaggaatatctgcc
gctgccagagatgctgttaaagctggcattgaggctggaaatattaatatctccagtggc
gagtctatggagatggaggagcgtgtgagtgagcgacaggctgaagtgctggcagagttt
gagcgcagaaagagagcgagacaaatcaccgtctctactgatgatgtagaggtcaaagcc
tgcctccgagctcttggcgagccaatcacgctgtttggggaggggcctgcagagagacga
gagagattgaggaacattctttcagtagttggtcctgacgccttgaagaaatcaaagaaa
gaggatgaaaaagcaaaacggactcatgagtatcagcagacatggtaccatgaaggacct
tcatttctgaaagaggcacgtgtttggttagccaagtattcactgcccagggcagtggaa
aggttagatgccgcaagggcacacaaagagattccagaatctacaagaaccgtaaaacag
caagagcttcacaaggccctacggaatgtgaataacttctgcagccaaattggcgatgac
cgtccaatatctcactgccagtttagccccaactctaagctgcttgtgactgcttcatgg
agtggcttgtgtaaattgtggaaagtcccagattgtacacttgtacgcacattaagaggt
cacaataccaacgtgggagcgattagctttcaccctcaagccacactcacactcgaggag
tcggatgtcaatatggcctcctgtgctgtggatggatctgttaagctgtggagtttagac
agtgatgagcctgtagcagacattgaggggcactctatgagggtggctcgggtggcctgg
catccctctgggcggtttctgggcacaacttgctatgataactcgtggcgactttgggat
cttgaagttcaagaagaaattctgcatcaggagggtcatagtaaaggtgtccatgacctg
cacttccacccggatggctctctggcaggaactggtggtttggatgcatttgctcgtgtc
tgggacctgcggactggtcgttgtatcatgttcctggagggccaccacaaagagatttac
agcatcaatttctcaccaaacggctttcacgtggcaacaggaagtggagataacacctgt
aaagtgtgggaccttcgtcagagaaggtgcatgtatacaattcctgcccatgaaaacctt
gtgtcttcagtcaagttccaacctaacgatgggcattttttgctgactggtgcgtatgac
aacatagccaaagtgtggacacatcccggctggtcacctctgaagactttggcggggcat
gaaggaaaggtcatggggcttgacctttcacctgacggacagctcattgcaacctgctct
tatgaccgaaccttcaaactctggatgtcagaatga
DBGET
integrated database retrieval system
