Sinocyclocheilus rhinocerous: 107721665
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Entry
107721665 CDS
T04916
Name
(RefSeq) structure-specific endonuclease subunit slx1-like isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107721665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107721665
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107721665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
107721665
NCBI-ProteinID:
XP_016385278
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MVVEVESFYGVYMLYCTNPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEM
VLIIHGFPSDIAALRFEWAWQHPHISRRLSHVARRSRKESSLQFHWRVVSNMLRVAPWSR
LPLTVRWLKQEYRMDFAPELQPPLHIPLTFGCVRAKTKPQQECKEQDERQVERCVLCGVF
VKAMGRLSCFHPSCQMVSHLICLAKHFLKADPSHLLPVEGKCPGCHHSVLWGSLIRHKNG
CYGDLEEISSSSSQVDIDMISPMLYHNLLCVANKFYNFNSFKS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggtggtagaggtggagagtttctatggtgtgtatatgctgtactgtactaacccgaaa
ttcaagggtcgaatatatattggcttcactgtgaacccagagcgccgtataggtcaacac
aacgctggacgacaccgaggaggagccaagagaacaagtggcaggggaccatgggagatg
gttcttatcattcatggctttccatctgatattgcagctcttcggtttgagtgggcttgg
caacatccacacatttctcgtcgactgtcccatgttgcccggcgcagccgtaaagagtcc
agtttgcaattccactggcgtgtggtgtcaaacatgctgcgagtggcgccgtggagtcga
cttcccctcactgtgcgctggttaaagcaggagtaccgaatggactttgctcctgaactg
cagcctcctctgcacattcctctaacatttggctgtgttcgtgctaagacaaaaccccag
caggagtgcaaggaacaagatgagagacaggtggagcggtgtgtgttatgtggggtgttt
gttaaggctatgggtagactatcttgtttccacccttcctgtcaaatggttagtcatctg
atttgcctggctaaacactttctgaaagcagacccttcccacctacttcctgtggaggga
aagtgtcctggctgtcatcactcggtgctgtgggggagtttgatacgccataaaaatggc
tgttatggtgatttggaagaaatttcctcatcctcatctcaggttgacattgatatgatt
tctcctatgttgtatcataatttattatgtgttgccaataaattctacaattttaattca
tttaaatcttaa
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