Sinocyclocheilus rhinocerous: 107722047
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Entry
107722047 CDS
T04916
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
srx04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107722047
04518 Integrin signaling
107722047
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107722047
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Alanine_zipper
PilB3_C
CCDC39
DUF6061
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
107722047
NCBI-ProteinID:
XP_016385760
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MSLFSCLLLWTLWAACSHGAMDECIDEFNRPQRCMPEFVNAAFNVTVVATNTCGSPPEEY
CVQTGVTGVTKSCHICDAGDPRHHHGSVYLTDYNNQADTTWWQSQTMLAGIQYPNSINLT
LHLGKAFDITYVRLKFHTSRPESFTIYKRTSEDGPWIPYQYYSGSCEKTYSKINRGFIHT
GEDEQQAVCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNRL
NTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNERSKLVCNCKHNTEGPDC
NVCKPFYNDRPWRRAAADNPNECLPCNCNGKSGECYFDPELYRATGHGGHCRNCADNTDG
PNCERCLDNYYRDPSGQRCLSCSCNPVGSLSTQCDNTGRCSCKPGVIGDKCDRCQPGYHT
LTAAGCRPCSCNPAGSTQECDVQTGRCQCKENVDGFNCDRCKLGYFNLDLQNPQGCTPCF
CFQHSTVCESADGYHIHKITSNFDRDEEGWKGQQRDSSSVPVQWSPTSREISLISEDYFP
IYFVAPETFLGNQLLSYGQNLTLNFRIQRHDARLSAEDVVLEGAGHRVAVPLIAQGNSYP
GEETQTFVFRLHDTTDYPWRPTTKYADFQKLLYNLTSVMIRGTYSARSAGYLDNVSLVTA
RRGPGTPARWVEKCMCPQGYLGQHCEQCDLGYRRSQPELGRFSSCESCNCNGHSDTCDPV
TGMCNCQHNTAGMSCERCKDGFYGDSTVGSSSDCKPCPCPAGATCAVVPRTKEVVCTNCP
TGTTGKRCELCDDGFFGDPLGENGPVRACRACSCNNNIDPNAVGNCNRESGECLKCIYNT
AGVFCDRCKEGFYGDARAANVADKCKPCSCSRYGTVDRKTTCSQVTGQCQCLPHVINRDC
SACEPGFYNLQSGKGCERCNCNSIGSTNGQCDIVSGQCECQPGVTGQHCERCEVNFFGFS
SSGCKPCDCDPEGSESAQCKEDGRCQCLPGFVGARCDMCEENYFYNRSTPGCQQCPNCYS
LVRDKVNQQRQKLHDLQNLIDNLDSTENTVSDKAFEDRLKEAEKTIMDLLEEAQASKEVD
KGLLDRLNNINKTLNNQWNRLQNIKNTVDNTGTQADRARNRVRDAENLISTAREELDKAK
EAISKVDIKIPTTSGDPNNMTLLAEEARKLSEKHKADADQIEKIAKDANDTSTKAYNMLK
KALDGENKTSSDIDELNRKYVEAKDLAKNLEKQAAKVQAEAEEAGNKALKIYANLTSLPP
IDTKTLEDEANKIKKEASDLDKLIDKTEKEYNDLREDLRGKETEVRKLLEKGKTEQQFLK
YSHDFDKRVNDNKTAAEDAMRRIPEINATINEANEKTRRAEAALGNAAADAKEAKEKAEE
ADKIANDVQKGSAKTKVDAEKAFEDTMKLDGEVNNMMDQLTAAEKELEKKKAEADADMMM
AAMASDNAKEAEGNARKAKNAVRTVLNTINELLGQLGNIDKVDLSKLNQIDSALKDAKDK
MAGSELDRKLKELNDIAKSQEDMISDYDRQIREIRADIANLNDIKNTLPVGCFNTPSLER
P
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttttagctgtttgttattatggactttgtgggcagcgtgcagtcacggagcg
atggatgaatgcatagacgagttcaatcggcctcagcgctgcatgccagagtttgttaac
gccgctttcaatgtaaccgtagtggccaccaacacttgcggctcgccgcctgaagagtac
tgtgtacagaccggggtaacgggagtcacaaaatcatgccacatttgcgacgccggagac
cccagacaccaccacggctctgtttatctcaccgattacaacaaccaagcggataccacc
tggtggcaaagtcagactatgttagcgggcatccagtacccaaactccatcaacctgacc
cttcacctgggcaaggctttcgacatcacctatgtgcgtctgaagtttcacaccagccgt
cctgagagctttaccatctacaagcgcactagtgaagacgggccctggattccctaccag
tactacagcggctcctgcgagaagacctacagcaagatcaaccgcggcttcatccacact
ggtgaggacgagcagcaggctgtgtgcacagacgagtttagcgacatctcacctctcact
ggaggaaacgtggccttctcaacactcgagggccgacccagcgcatataactttgacaac
agccctgtactgcaggattgggtgactgccacggacatcagagtgaccctgaacagatta
aacactttcggagatgaagttttcaacgatcccaaagttctcaaatcctactactacgct
atctctgacttcgctgtgggaggaaggtgcaagtgtaacggccatgccagcgagtgtgtg
aagaacgagcgcagcaagctggtgtgtaactgcaaacacaacacagagggaccagattgc
aacgtgtgtaagcccttctacaatgaccgtccctggaggagagccgccgctgacaacccc
aacgagtgtctgccttgtaactgtaatggaaagagtggcgaatgttacttcgatcctgag
ctgtatcgtgccactggtcatggaggtcactgccgcaattgtgctgacaatacggatggg
ccgaactgcgagcgatgcctggataactactacagagacccctctggccagcgctgtctc
tcctgcagctgcaaccctgttggttctctcagtacccagtgtgacaacactggcagatgt
agctgtaagccgggagtgattggagataagtgtgacagatgccagcctgggtaccacaca
ctgactgcggcaggctgcagaccctgctcttgtaatccagccggaagcacgcaggagtgt
gatgtccagaccggacgctgccagtgcaaggaaaatgtggatggattcaactgtgacagg
tgtaaactgggctactttaatctggacctccagaatccccagggatgtactccatgcttc
tgcttccagcattccactgtgtgtgaaagtgccgatggctaccacatacacaaaatcacc
tctaacttcgacagggatgaagagggctggaagggacagcagagagacagctctagcgtt
cccgtgcagtggtcacccacctctcgagaaatctcactcatctcagaagactacttccct
atctactttgtggctccagagacatttcttggtaatcagctgctgagctatggtcagaac
ctcacgctgaacttcaggattcagcgacatgatgctcgactctcagcggaggacgttgtg
ctggaaggggctgggcatcgtgttgctgtgccacttattgcccagggcaattcctaccca
ggagaggagacacaaacctttgtgtttagactccatgacacaactgactatccttggaga
cccaccacaaaatatgccgacttccagaaacttctgtataatctgacttcagttatgatt
cgtggaacctacagtgcaagaagtgctggttatttagacaacgtgtccctcgtgactgcc
cgccgtggccctggaactcctgctcgttgggttgagaagtgtatgtgtcctcagggttac
ttggggcagcattgtgagcagtgcgatctgggatataggaggagccaacctgagctgggc
cgctttagcagttgcgagtcctgcaactgcaacggacacagtgacacttgcgaccctgtg
acaggaatgtgtaactgccagcacaacaccgccggcatgagctgcgagaggtgtaaagat
gggttctatggggactctacagtcggctcatcttcagactgtaaaccctgtccctgcccc
gcaggtgccacgtgtgccgtggtgcccaggaccaaagaggtggtctgtacaaactgccca
actggaaccacaggtaagagatgtgaactatgtgatgatggcttcttcggggaccctctt
ggtgaaaatggtccagtcagggcatgccgtgcctgcagctgcaataacaacattgacccc
aacgctgtgggcaactgcaaccgagagtcgggcgaatgcctcaagtgcatttacaacact
gccggcgtcttctgtgaccgttgcaaagagggtttctacggtgatgcccgtgccgcaaat
gtagctgacaaatgcaaaccatgctcgtgctctcggtacggtacagtggacaggaagacg
acctgctctcaggtgacgggtcagtgtcagtgtcttccccatgtcattaacagagactgc
agtgcatgtgagcctggtttctacaacctacagagcggcaagggctgtgaacgatgcaac
tgcaactctattggctccacaaacggtcagtgtgatatcgttagcggccaatgcgagtgt
cagcctggggtcacaggtcaacactgtgagcgctgtgaggtcaacttctttggattcagt
tcatcgggttgcaaaccttgtgactgtgacccagaaggctcagagtctgctcagtgcaag
gaagacgggcgttgtcagtgtctcccaggctttgtgggagctcgctgtgacatgtgtgag
gagaactacttctacaaccgctccacaccaggctgccagcagtgtcccaactgttacagc
ctggtcagagacaaggtgaaccagcagagacagaagcttcatgacttacagaatttgatt
gataatctggacagcactgagaatacagtgagtgacaaggcctttgaggacagactgaag
gaggcagagaaaactataatggacttactggaagaggctcaggctagcaaagaagtggat
aaaggccttttggaccgtctaaacaacatcaacaagaccctgaacaaccagtggaaccga
ttgcagaacatcaagaacacagtggacaacacaggaacgcaggcagatcgagcacgtaac
cgagtccgtgatgcagagaacctgatcagcactgctagagaggagctggacaaagccaag
gaggccatcagtaaagtggacattaaaatacccacaacctctggagatccaaacaatatg
acacttctggcagaggaagcccgcaaactgtccgaaaaacataaagcagatgcagatcag
attgagaagatcgcgaaggacgccaatgacacatccactaaagcctataatatgctaaag
aaggcgctcgacggcgagaacaaaacaagcagcgacatcgatgaactcaacaggaaatat
gttgaagcaaaggatctggccaagaacctggagaaacaggctgctaaagtacaagctgaa
gcagaagaggcaggaaacaaagctctgaagatctacgctaacctgaccagcttgccccca
atcgacaccaaaacattagaggatgaggccaataagataaagaaggaggcatcagacctg
gacaaactgatagacaagactgagaaggagtacaacgacctgagagaggacctgaggggc
aaagagacagaagtccgcaaactactggaaaaaggaaagactgagcaacagtttttaaaa
tacagtcatgactttgacaagagagtgaatgacaacaaaactgctgctgaggatgccatg
aggcgaatcccagaaatcaacgcgacaatcaatgaagccaatgagaagacccggcgggcc
gaggcggctttaggcaacgcagctgctgatgctaaagaagccaaggaaaaggcagaggaa
gctgataaaatcgctaatgatgtgcagaagggttcggcaaagacaaaggtagatgcagaa
aaagcttttgaagacaccatgaaactggatggagaggtgaacaacatgatggaccagctc
acagctgctgagaaagagctggagaagaagaaagctgaggcggacgctgacatgatgatg
gcggccatggcttctgataatgctaaagaagctgagggcaatgccagaaaagccaaaaat
gctgttaggacagtgctgaacacgatcaatgaattattaggccagcttggcaacatcgat
aaggtggatctgagcaagctgaatcagatcgatagcgctctaaaagacgccaaggacaag
atggcaggaagtgagctggacaggaagctgaaggagctgaacgacatcgccaagagccag
gaggacatgatcagcgactacgaccgtcagatccgagagattcgagcggacatcgctaac
ctcaacgacatcaagaacactctgccagtaggctgcttcaacactccgtctctggagcgg
ccttga
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integrated database retrieval system