Sinocyclocheilus rhinocerous: 107722067
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Entry
107722067 CDS
T04916
Name
(RefSeq) protein SMG7-like isoform X1
KO
K14409
protein SMG7
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107722067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107722067
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
107722067
mRNA cycle factors
Common to processing body (P body) and stress granule
107722067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_17
TPR_2
TPR_7
zf-AD
Motif
Other DBs
NCBI-GeneID:
107722067
NCBI-ProteinID:
XP_016385774
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQSSTSAIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
TKWSVSDFIKAFIKFHGHVYLCKSLDKLNTLREKLEEQFQRLILQKAFSSQQLVHITVIN
LFELHHLRDFSSEADEHSYSSDEQISWIQLLGLFMSFLGVMLSRALLNKNREEIMGECPL
PAIKASLDWLRLRPSAFNESAMDKRQYIWPWLVSILNSFQPKEEDVSNASVIPLPEEFEL
QGFLALRPALRMLDFSKGHQGMVVGKESLLIHARHQRLISLGKWVADNQPQLIQCRISDG
LLLFITDIPEMVVEEPHEKDTPVLQESSNGEQTPNDSTQGLKSVLSAGKNQNSGLDGSER
PVVTFKENIKPQEQSREQNRNQHQRDAGKDRAGFNKGNGIQGKIEQKKEGKRKSEVKKNI
HDKTADAGKQVKTPTEMKKTPVSEARKTPVTQTQTTCSSQFIPIHHPGAFPPLPSRPGFP
PPAYVIPPPVAFSMSPGFTFSTGVSVPAPFLQTASHPPSANPVQTGKPSHIPYSQQRPSG
PGALNHGPPQPQQTQPPPPQPSQQALQQSVQLHVQQQQQQQSPTKQSSQLGKSPPHHHSM
QQSYMLLAEQSGQMWNQHQTQPTMQKMPMQMPVKQPFFMPTQDPMKLFEHPMSMQPPQPS
MDKKMKFPEVKMQDFYWEPSYHMGGEGRSGMGDRMGKRQPGVFCPDQENMPRGPPYEDNK
SSPLLPPDLLKTLADFEEEEELLFTKPHDFYQALAGPLNSAPGRNMFLPNQSRLDSGADV
IGQSSLLPRFSIPESSYQNNSIFSEAYGKNMAPASKPDVPMMHQEPSLYSLFEGTPWSPS
LPASSDHSTPASQSPHSSNPSSLPSSPPSHSSLPISNFGPIGTPDSRDRRGTDRWKADKT
GVSGFGLDYLPSASSSSVPDTNSWHQGAPTSSWAAQDMPMEDSSTVLLDSFKSIWSSSMM
QPGPSALEQLLMQQKQKQQRGHGNMNPPH
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccaatacttacggcaggcagaggccctgaaggctgacatgacagat
tcaaagcttggtgccgcggaggtctggacatcacggcaggctcttcaggacttgtaccag
aaaatgctggttacggacctggagtacgccctggacaagaaagtggaacaagatctctgg
aaccatgcttttaagaatcaaataaccacactacagagtcaagctaagaacagggccaac
cccaatcgaagtgaagtacaggccaatctctccctgtttcttgaggcagctagtggattc
tacacacaactgttgcaggagctgtgcacggtgtttaatgtggacttgccttgccgtgtg
aaatcatctcagcttggcatcatcagcaataaacagagcagcaccagcgccatagtgaag
ccccaacccagctcctgttcctacatctgccagcactgtcttgttcatcttggagatatt
gcacgttatcggaaccaaaccagccaggctgagtcgtactatagacatgcagctcaactt
gttccctcaaatggtcaaccttacaatcaactggccatcctggcttcctccaaaggagac
cacctcacaacaatcttctactattgcaggagcattgctgtcaaattcccctttcccgct
gcctccaccaacctacagaaagctctttctaaggcccttgagagccgtgatgaggtcaaa
acaaaatggagcgtgtctgattttattaaggccttcatcaagttccacggccatgtttat
ctctgcaaaagcttggataagttgaacaccctgagagagaaattagaggagcagttccag
aggctgattctgcagaaagccttcagttcccagcagctggtccatatcacagtgataaac
ctgtttgaactgcaccacctccgagacttcagcagtgaggcagatgagcacagctacagc
tcagacgagcagatcagttggatccaactcctcggcctcttcatgtctttcctgggcgtg
atgctaagccgagctttactcaataagaaccgagaggagatcatgggagagtgccctctt
cctgccatcaaagcgtctctggattggctgaggcttcgaccgagtgcgtttaatgaaagt
gccatggacaagcgacagtacatctggccatggctggtgtccattctgaacagctttcag
ccaaaggaggaggatgtgtcaaatgcgtcagtgattccactgcccgaggagtttgaactg
caagggtttctggcccttcggcctgctctgcgaatgctagacttctctaaagggcatcag
ggtatggtggttggcaaagagagcttgctaattcatgcccgacaccagagactcatcagc
ctgggcaagtgggtggctgacaaccaaccgcagttgatccagtgtcgcataagtgatggc
cttctgctcttcatcactgatatccctgagatggtggtggaagagccacatgaaaaagac
acacctgtcctccaggagtcatctaatggtgagcagacgcctaacgacagcacacagggc
ctgaagtcggtcctctcggccggaaagaaccagaacagcgggctggatggcagcgagaga
cctgtggtcaccttcaaagagaacatcaaacctcaagagcagagtagagaacagaaccgg
aaccagcaccagagggatgcagggaaggacagagctggatttaataaaggaaatggaata
caagggaagatcgaacagaagaaagagggcaagagaaagagcgaggtgaagaaaaacatt
catgataaaacagcggatgctgggaaacaggtgaagactccgactgagatgaagaagact
ccagtgtctgaggcgaggaagactccagtcacacagactcaaaccacatgctcttcacag
tttatcccaatccaccacccaggagctttcccccctctgcccagcagaccaggtttcccc
ccgccggcatacgtgatccctcctcccgtggcgttctccatgagcccggggtttaccttc
tccacaggtgtatccgtacctgcacccttcctccagactgcttcccaccctccatctgcc
aacccagtgcagacagggaaaccctcacacattccctacagccagcagaggccctcaggc
cctggagccctaaaccatggccctccacagcctcagcagacacagcctccccctccacag
ccatctcaacaggccttgcaacaatctgtacagcttcatgtacagcaacaacaacagcaa
cagtcgcccacaaagcagagctctcagcttggaaaaagtccgccacatcatcacagcatg
caacagtcttacatgctgttggctgaacagtctggtcaaatgtggaaccagcaccaaact
cagcccaccatgcagaaaatgcccatgcagatgccagtcaaacagcctttcttcatgccc
acccaagacccaatgaaactctttgaacaccccatgagcatgcagccccctcagcccagc
atggacaagaagatgaagtttccggaggtcaaaatgcaagatttctattgggagccttca
taccacatgggaggagagggcaggagcggaatgggggacagaatgggcaaacgtcagcct
ggagtcttctgccccgatcaggagaacatgcccagaggccctccatacgaagacaacaag
agctcccctcttctgcccccagacctgttaaagactctggcagactttgaggaggaggag
gaattgctctttactaaacctcatgatttctaccaggccttggctggccctcttaattct
gctcctggaaggaacatgtttttgccaaatcagtcacgactagacagtggagctgatgtg
attggccagtcctctcttctcccccgattttccattccggagagctcctaccagaacaac
agcatttttagcgaggcctatggtaaaaatatggctcctgcgtctaagccagacgtaccc
atgatgcaccaggagccttcactctactccctgtttgaaggaactccatggtccccctcc
cttcctgctagctcagatcactctacaccagccagtcagtcccctcactcttctaaccca
agcagcctgccttcatccccacccagccacagctccctacccatctccaacttcggccct
atcgggacgcctgacagcagagaccgccgaggaaccgatcgctggaaggctgataagact
ggtgtgagcggctttgggttggactacctgccgtctgcctcttcctcctctgtgccagat
accaacagctggcaccagggggcgccaaccagcagctgggcggcccaggacatgccaatg
gaggactcctccaccgtcctccttgacagtttcaagtcaatctggtcgagctctatgatg
cagcccggtccgtctgctctggagcagctcctgatgcagcagaaacagaagcagcagcgc
ggccacggcaacatgaacccgccacactga
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integrated database retrieval system
