Sinocyclocheilus rhinocerous: 107722078
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Entry
107722078 CDS
T04916
Name
(RefSeq) tenascin-N-like isoform X1
KO
K06252
tenascin
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
srx04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107722078
04518 Integrin signaling
107722078
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107722078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107722078
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107722078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Fn3_PBP1
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_Tenascin
EGF_2
Interfer-bind
Fn3_VIN3
DUF4998
SdrD_B
DUF7949
hEGF
EGF
Ig_ANOS1
EGF_PEAR1L
SPE9_EGF_3rd
Motif
Other DBs
NCBI-GeneID:
107722078
NCBI-ProteinID:
XP_016385788
UniProt:
A0A673GBK0
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MIVRFNRLKRGLFLLGMLFTVSRLVLSEEVGPAEKEVTFSHVYRIDSGCKQGSQVAQLSQ
DQASEGQLVTVDGENDIVFKHSIRLQSAGCGCADSEDFKALLYRVNGLEEEVTYLKSQCA
QGCCKGGSGVDTSCSGHGTYQHDSCSCKCNPGWESPDCSISSCPDECNDNGRCVDGRCVC
HEGYTGHDCSQLTCPNDCKDKGHCVDGKCVCFSGFSGEDCSIATCPNDCIGNGRCVDGQC
ICDEGFFGIDCSMVLGPKGLRLIKVTDVSLLVEWESVRGAEYYILSYYPKGDEGAIKEVQ
VENTKNSYLITGLRPGVTYIVQVYAVIRGINSESDEIVATTDVSGIEGIKVLGQTEDSIQ
VDWKNPAIAVDFFKLTHASPDGQGGQENVAMSQEARTKHTIVGLNPGTEYQIGVQAIKSE
SEGKPSYATGVTDIDAPTNLATREVTENSAIVTWDGVRAEIDGYMLTYSSAEGTSREIKV
AVDATSHQLTSLKPGVLYTVFLWAYKGSRSSRKSMTEAETDIDAPTNLMTREVTEDSALV
TWDKVQADIEGYMLSYSSIDGSGQEVRVGADSTSYRFTALKPGVLYTVYVWAIKGPRSSK
KSSTEAETDIDAPTNLLTREVTEDSALVTWDKVQADIEGYMLSYSSIDGSGQEVRVGADS
TSYRFTALKPGVLYTVYIWAVKGPRSSRKATTEAETEIDAPKNLKAIDVQTQTSTITWKA
PQANIDGYILTYRAEDGSMQTVEKMLTAQENRFALSDLAMGKKYIVTLIAYRGTKRSRAV
ETSFSTVGLAYPFPMDCTQIMRNGNMESGVYTIYVNSNHSRTMQVYCDMTTDGGGWIVFQ
RRNTGKLDFMRRWREYMKGFGELTDEFWLGLEKIHELTNTPTQYEVRFDLGLGSERTYAV
YDNFKVAPSKQRFKLTIGNYKGNAGDAMTYHQGGSFSTVDSDNDIALGNCALTHQGAWWY
KNCHLANLNGRFGDNRHSLGVNWEPWKGHLQSLDFAEIKLRPVGAAGRQKRSLKRRVAVY
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagattcaaccggctgaagagaggcctcttccttctagggatgctctttacg
gtatcccgtcttgtgctctctgaggaggtgggtcctgcagagaaagaagtcacgtttagc
catgtctacaggattgactctggttgtaagcagggttctcaagtggctcagctttcccag
gaccaggcctcagaaggacagttagtcacagtggatggagagaatgacattgtcttcaag
cacagcatacgtctgcagtcggctggttgtggatgtgcagattccgaggacttcaaagcc
ctgctgtaccgtgtaaatggcctggaggaggaagtcacctacctaaagagccagtgtgct
cagggctgctgcaaaggagggtcaggtgtggacactagctgcagtgggcatggcacgtac
cagcatgactcttgcagttgtaagtgtaacccaggctgggagagtccagactgctccatc
tcatcctgccctgatgaatgcaacgataatggccggtgtgttgacggacgctgcgtctgc
catgaaggctatactggccatgactgcagccaactcacgtgccccaatgactgcaaagac
aaaggccactgtgtggatggcaaatgtgtgtgctttagtggattctcaggagaagactgc
agtatcgccacctgtcccaatgattgcataggaaatggacgctgtgtagatggacagtgc
atctgcgatgagggattctttggaatcgactgctccatggttttaggaccaaaaggcctc
cgtctgatcaaagtcacagatgtatctctgctggtggagtgggagtctgtgagaggagct
gagtactacatcctgtcctactatccaaagggagacgagggagccattaaagaggtccag
gtggaaaacacgaaaaactcctacctgatcacaggcctcagacctggagtcacatacata
gtgcaggtgtacgctgtcatcaggggtattaacagtgaatccgatgagattgtggctacg
actgatgtctctggtattgaaggaatcaaggtgctgggtcagacagaggactctatccag
gtggactggaagaaccctgcgattgccgtggacttcttcaaattgacccatgccagccct
gatggtcagggaggacaggagaacgtggcaatgagccaagaggccagaaccaaacacacc
attgtaggcctcaacccaggaacagaatatcagataggcgtgcaagcaatcaaaagtgaa
agcgaaggcaagccgtcgtatgccacaggggtcacagacattgatgccccaaccaatctg
gcaaccagggaggtgacggagaactctgcaatcgtgacgtgggatggtgttcgtgctgag
atcgatggctacatgctgacttacagctctgcagagggcaccagccgagaaattaaagtg
gccgtggatgctacttctcaccaactgacctctctgaaaccaggagtcctgtacacagtt
ttcctctgggcctacaagggctctcgttccagtaggaagagcatgaccgaagccgagacg
gatatagacgctcctactaacctcatgaccagggaggtgacagaggactcggcgttggtg
acgtgggacaaggtgcaggctgacattgaaggctacatgctgagctacagctctatagat
ggctccggtcaggaggttcgagtaggagctgacagcacctcctacaggttcactgctctg
aagcctggagttctctacacagtctacgtgtgggccatcaagggccctcgctctagcaaa
aagagctcgacagaagcagaaacagatatagacgctcctactaacctcttaacccgagag
gtgacagaggactcggctttggtgacgtgggacaaggtgcaggccgacattgaaggctac
atgctgagctacagctctatagatggctccggtcaggaggttcgagtaggagctgacagc
acctcctacaggttcactgctctgaagcctggagttctctacacagtctacatctgggct
gtgaaaggccctcgctctagcagaaaagccacaactgaggctgaaacagagattgatgcg
ccaaagaatctcaaagccattgatgtccagactcaaacctccactataacatggaaagct
cctcaggctaatattgatggctacatcctgacctacagggctgaggatggcagcatgcag
actgtggaaaaaatgttgactgcgcaagagaatagatttgctctttctgaccttgcaatg
gggaaaaagtacattgtcacccttattgcctacaggggcacgaagaggagtagggcagtg
gagacgagctttagtacagtgggcctggcctacccattcccaatggactgcactcagatt
atgaggaatggaaacatggagagtggcgtctacacaatttatgtcaacagcaaccatagc
agaaccatgcaggtgtattgtgacatgacaactgatggcggcggctggattgtgttccag
agacgaaacactggcaaattagatttcatgaggcgctggagagagtatatgaaaggcttt
ggagaactgacagatgaattttggctcggcttggagaagatccatgaactgactaatacc
cctacacaatatgaagtgcgtttcgatctgggcttgggatcagagcggacatatgccgtc
tatgataacttcaaagtagcaccttccaaacagaggtttaaacttaccattggcaactac
aaaggaaatgctggtgatgccatgacctaccaccagggagggtctttctccacggtggat
tcagacaatgacattgcgcttggtaactgtgctctgactcaccaaggtgcctggtggtac
aagaactgccacctggccaatctgaacggcagatttggggacaacagacacagtctggga
gtaaactgggagccatggaaggggcacctccagtctctcgactttgcagaaattaagctc
cggccagtgggagcagcgggcagacagaagaggtcattgaaaaggagagtagctgtgtat
taa
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