Sinocyclocheilus rhinocerous: 107722630
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Entry
107722630 CDS
T04916
Name
(RefSeq) retinoic acid receptor RXR-gamma-A-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03320
PPAR signaling pathway
srx04148
Efferocytosis
srx04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107722630
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107722630
03320 PPAR signaling pathway
107722630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107722630
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
srx03310
]
107722630
Transcription factors [BR:
srx03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107722630
Nuclear receptors [BR:
srx03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107722630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
107722630
NCBI-ProteinID:
XP_016386561
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MDNNDTYLHLSSSLQVTLGHLSSPPSQPPLSSMVSHHHPSIINGLGSPYSVITSPSLGSP
SASLPTTSSMGYGALNSPQMNSMNSVSSSEDIKPPPGLAGLGSYACSSPGSLSKHFCAIC
GDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKDCQIDKRQRNRCQYCRYQKCLAM
GMKREAVQEERQRGREKSDNEMESSSSFNEEMPVEKILDAELAVEPKTEAYMESSTGNST
NDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSVTVK
DGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAK
GLSNPSEVEALREKVYASLEAYTKHNYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQIT
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggataataacgacacatatctgcatcttagttcttctttgcaggtaacactcggtcac
ctgagctctcctccatcccagcctcctctcagctccatggtgtcccaccatcacccctcc
atcatcaacggtctagggtcgccatactcagtcatcacttccccctctctgggctcacct
tcagcctccttgcccaccacctccagcatgggctatggagcgctcaacagtccacagatg
aactctatgaacagtgttagcagctcagaagacattaaacctcctccaggactggcggga
ctgggcagttacgcctgcagcagcccggggtccctctctaaacacttctgtgccatctgt
ggagaccgatcctcagggaaacattatggtgtttacagctgtgaaggctgcaagggcttc
ttcaagagaactatccggaaagacctcacgtacacgtgtcgagacagtaaagactgccag
attgacaaacgccagcgtaaccgctgccagtactgccgctatcagaagtgtctggccatg
ggcatgaagagagaagcggtgcaggaagagaggcagcggggtcgggaaaagagtgataat
gagatggagtctagtagcagctttaatgaagaaatgccagtggagaagattctggatgct
gaacttgcagtggaacccaagactgaggcttacatggagtccagcacgggcaactcgaca
aatgacccagtgaccaacatctgccaggctgcagacaagcagctctttactcttgttgag
tgggctaagagaatcccgcacttctctgaccttcctctggatgaccaggtcatcctgctg
cgagcaggttggaacgagctgctcatcgcttcattctcacatcgttctgtgacggttaag
gatgggatcctcttggccaccggcctgcatgtccatcgcagcagtgctcacagcgcaggg
gtcggctctatatttgacagggtattaacagagctggtgtctaagatgaaggacatgcag
atggacaagacggagctgggctgtctaagagctatcgtcctctttaacccagatgcaaaa
ggattgtcaaacccatcagaggtcgaggcattacgggaaaaagtgtacgcttcactggag
gcctacaccaaacacaattaccccgatcagcccggcaggtttgccaagctgctcctccgt
ctgcccgctctgcgctccataggactgaagtgcctggagcatctgttcttcttcaaactc
atcggagacacacctatagacactttcctcatggagatgctggaggcgccgcatcaaatc
acatga
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