Sinocyclocheilus rhinocerous: 107722645
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Entry
107722645 CDS
T04916
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srx03036
]
107722645
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107722645
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Meiosis-specific proteins
Others
107722645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
107722645
NCBI-ProteinID:
XP_016386586
LinkDB
All DBs
Position
Unknown
AA seq
1447 aa
AA seq
DB search
MLDSEEGVSSVDNLFYDGPVIHKVKPLCQGQGSWTFDAPPSLSQIPATQDIQGEAAHLFS
LSFSQRSKKFLPPAQKPIHNPIASVQWQSVKSHDLEESVLWTHEPSRERDQAVDRMGFVE
ARPLPTVSAPPFKTRLFRAPTRRISGNDEDGIPNQMMSTANDTGFLGQVAMTTTGPQTTH
AVAACSPFIDFDQTEQTCDVPSETNHNLHFGFKPAEFEGSSGKGTLRPVSEIPAKFRSVF
KEFPYFNYVQSQALDDVLYTNKNFVACAPTGSGKTVLFELAIVRLLIEASDAWHNVRAVY
MAPIKALCSQRFENWKQKFGPLGLNCKELTGDTEIDDIFEIQDAHLIFTTPEKWDSMTRR
WKDNCLLPSVSLFLIDEIHVVKDKTRGATLEVVVSRMKTMHSYQLAVNPESKASTRFVAV
SATIPNIQDVSEWLSDESGPATCLEMDETHRPVKLRKVVLGFPCGSNQNEFKFDLSLNYK
MANVIQTYSDQKPTLVFCSTRKGVQQSASVLAKDARFIMSLEHKQRLMKYANSLLDAKLR
DLFICGIGYHHAGMDVSDRKLIEEAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTLHYV
GGACEEYSEADLLQMIGRAGRPQFDTTATAVIMTRSQTKDKYTHFLSGIDSIESSLHTNL
VEHLNAEIVLHTISDVNMALDWIRSTFLYIRALKNPKHYGFSPELDKCGIETKLQELCLK
NLNSLASFSLITMDEDINIKPTETGKLMARYCVAFDTVKQFSMVTGTETLPELIEMISKG
KEFSDVQLRVNEKKTLNMLNKDKNRTTIRFPMEGKIKSNDMKVNCLIQAQLSCIPIQEFG
LIQDTGKIFRNGNRVSRYLTEFLSHHSKSNFSARLNSLILAKCFRAKLWENSPYVSRQLE
RIGITLATAMVNAGLTTFSKIEQTSPRELEMIVNRHPPFGNQIKEVVIKLPKCEVTLEQI
PRYSLSTAEISVTVNLMNFQELASKQTAPDHHYVTLIIGDCDNNVVFQQKILNTLLSKSG
SWSKRIEVTRAPKGEELSVHLISSEYVGLDVQQKYRVYYSGVKRFGAESCIRENPTWRVQ
RIYKIEKAQDTTLTTPAPSNRDPVALNIVKRQCHHVCKNKELCGHDCCKIGVMKRSVSQS
NFTSYLSNLKMRNERLCETPVKRLKMRMNNGTAAVSMQQFSYKPKDTLPAAKKFEGSQYY
TQRAYEIKKLEASFDTQHENSSFESYHDGYNDEPGDFYSEIGDPALEQSQPLALPQRVLI
HSQLKPCNDGQMNRISANKASVYTAHANPEHSADFDHLWSGSLDVTFDLGVNDWDDFDDG
NLVEASEVCCDSELCDPMTDHGQPSNAGGLASASQCTAQIIQGTTSPVLPQRIQPMAATS
QTPVCSEMSMKSLSNQSQAKTPSVQRRFDFVTWTDAVLKENTPVSRDHTKDICNETSVFL
GMFDGLF
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgttagactcagaagaaggcgtttcgtcagtggataacctgttttatgacgggccagta
attcataaagtgaaaccattatgtcagggacagggctcctggacatttgatgctccaccc
tcattatcacaaatacctgcaacacaggacatccagggagaggcagcacaccttttctca
cttagtttctctcagagatcaaagaaatttctgccacctgcacaaaaacctattcacaat
cccatcgcaagtgtccagtggcagagtgtgaaatcacatgatctggaggaatctgttttg
tggacccatgaaccttctagagaaagagatcaagctgttgaccggatgggttttgtggaa
gcaaggcctttacctactgtcagtgctcctcccttcaagactcggttgttcagagctccc
acaagaaggatctcagggaatgatgaagacggtatcccaaatcagatgatgtcaacagca
aatgacacaggtttccttggtcaggttgccatgacaaccaccggtccacagactacacat
gctgttgctgcctgtagtccctttattgactttgaccaaacagaacaaacatgtgatgta
ccttcagaaacaaaccataatctccattttggtttcaaacctgcagaatttgaagggtca
tctggaaaaggaacactacgtccagtctctgaaattcctgctaaattcagaagtgtgttt
aaagaattcccttacttcaactatgtgcagtcccaagcactggatgatgttctgtacaca
aataaaaattttgttgcctgtgctcccacgggctctgggaagactgtgctctttgagctg
gccattgttcgactactgattgaggcttcagacgcctggcacaatgtcagagctgtgtac
atggcaccaattaaggctctttgcagtcagcgttttgaaaactggaaacagaagtttgga
ccccttggactaaactgcaaagagttaactggagacacagagattgatgacatttttgaa
atccaggatgctcatctgatttttacaactcctgaaaaatgggacagcatgacaaggagg
tggaaggataactgtttattgccatctgttagtctcttcctcattgatgagatacatgtg
gtcaaagacaaaacccgtggagcaactcttgaagttgtggtcagcagaatgaaaaccatg
cactcgtatcaactggctgtaaatccagaatcaaaagcatcaacgagatttgtggctgtc
tcagctaccatcccaaacattcaggacgtatctgaatggctttcggatgagtccgggcct
gccacttgtttggagatggatgagactcataggcctgtgaaactgaggaaagtggtgctt
gggttcccgtgtggaagtaatcagaatgaattcaagtttgatctttctctcaactacaaa
atggccaatgttattcagacctactctgatcaaaaaccaacccttgtgttttgctccaca
agaaaaggagttcaacagtctgcttctgtgcttgccaaggatgccagattcattatgagc
ctcgaacacaaacaaagactgatgaaatatgcaaactctctgcttgatgcaaaactcaga
gatctatttatttgtggcattggatatcatcatgctggcatggatgtgtcagacaggaaa
ttgattgaagaagcatttactgtgggtgacttgccagtgttatttacaaccagcaccctt
gctatgggtgtgaatctgccagcccaccttgtggtaatcaaatccacattgcactatgtc
ggtggtgcatgtgaagagtatagtgaagctgaccttttacagatgattgggagagctggc
agacctcagtttgatacaacagcaactgcagtgatcatgacccgatctcagacaaaggac
aaatacacacatttcttgagtggcatagacagcatagagagcagcttgcatacaaacttg
gtggagcacttgaatgcagagatagttctccataccatatctgacgtgaacatggctcta
gactggatccgctccaccttcctgtacatccgtgctttgaaaaaccccaaacactatggt
ttttctcctgagcttgacaaatgtggaattgagactaaattacaagagctgtgcttgaag
aacctcaattctttggcctctttcagcctgattaccatggatgaagacattaacatcaag
cccacagagactggaaaactcatggccaggtactgtgttgcttttgacactgtgaagcag
ttcagtatggtgacaggaacagagacattacccgagctgattgaaatgatatcgaagggg
aaagaattcagtgatgtgcagttgagagtaaatgaaaagaaaaccttgaacatgttgaac
aaggataagaacaggaccaccatcaggtttcctatggaaggaaagatcaaaagtaatgac
atgaaagtgaattgtctgattcaagctcagctcagctgcatccccattcaggagtttgga
ctcatacaggacactggaaaaatattcagaaatggaaatagagtcagcagatatctgact
gagtttctcagtcatcactccaagtcgaatttctcagctcgactcaactctttaattctt
gccaaatgttttcgtgctaaactgtgggagaactcgccttacgtctccagacagcttgag
aggataggaataacacttgccactgctatggtgaatgcagggcttacaacattcagcaaa
attgagcagaccagtcctagagaattagagatgattgtgaaccgacaccctccatttggc
aaccagattaaggaagttgtcatcaaacttccgaaatgtgaagttactttggaacagatt
ccacgatacagtctctccacagctgagatttctgtcacagtgaacttgatgaatttccag
gagttggcatcgaaacagacagcaccagaccaccattatgtcactctcattattggagac
tgtgacaataatgtagttttccagcagaaaatcctgaacacgttgctctcgaaatctggg
agctggtcaaagagaatcgaggtgacaagagcacctaagggagaggagctaagcgttcat
ttgatcagctctgaatacgtgggactggacgttcagcagaagtacagagtctactactca
ggagtgaaaaggtttggagctgagtcctgcattagagagaaccctacatggagagtgcag
aggatttacaagatagagaaggcacaagacactacactgacaactccagctccgtcaaat
agagatccagtggctctgaatatagttaagagacagtgccatcatgtttgcaaaaacaag
gagctctgtgggcatgactgctgcaaaattggagtgatgaaaaggtctgtaagtcagtca
aatttcacctcgtacctcagcaatctaaaaatgaggaatgagagactctgtgagactcct
gtgaaacgtttaaagatgaggatgaataatgggacagcagctgtaagcatgcagcagttc
tcatacaaacccaaagacacacttcctgctgccaagaagtttgagggaagtcagtattac
actcaacgtgcatatgaaatcaagaagctagaggccagttttgacactcaacatgagaat
tcatcatttgagtcataccatgatggttacaatgatgagccgggagacttttattctgaa
attggagacccagcattagaacagtctcaacctttggctttacctcaaagggttttgatt
cacagtcaactcaagccatgcaacgatggacagatgaacagaataagtgctaataaagcc
agtgtttatactgcccatgcaaacccagagcacagtgctgactttgatcacctctggtct
ggttctcttgatgtgacctttgacctgggagtaaatgattgggatgattttgatgatggt
aacctggttgaagctagtgaggtgtgctgtgattccgaactatgtgaccccatgacagac
catggtcaaccttcaaatgctggaggtttggcttcagcctcacaatgtacagcccaaatc
atacaaggaactacaagtcctgtcttgccacaaaggatccaaccaatggctgctacctct
caaactccagtgtgctcagaaatgagtatgaagtccctttcaaaccagagtcaagccaaa
acaccttcagtccaaagaagatttgattttgtcacatggacagatgcagttttgaaggaa
aacacacctgttagcagggatcacacaaaggacatctgcaatgagaccagtgtttttctg
ggtatgttcgatggccttttttag
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integrated database retrieval system
