Sinocyclocheilus rhinocerous: 107722841
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Entry
107722841 CDS
T04916
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD7-like isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107722841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107722841
03016 Transfer RNA biogenesis [BR:
srx03016
]
107722841
Enzymes [BR:
srx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
107722841
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
107722841
Transfer RNA biogenesis [BR:
srx03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
107722841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
Motif
Other DBs
NCBI-GeneID:
107722841
NCBI-ProteinID:
XP_016386818
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MRSTNAFSDPAPPCVTPIGVNGCDSSPLSSGDSESDSPTSDSSSATSDSMSAHPTKLHFN
FSEHLHNFNNSLQQHYQRLHTQIIMDNHLKHHPVRKRSDNKASTYGMNYFMSHSNGSHLC
GTPWATRRYSPGVNGLHEEMVDFYHFMSPRPEEEEMRRDVVNRVETVIKDLWPMAKVEIF
GSFSTGLYLPTSDIDLVVYGKWEQPPLQQLDQALRQNKVAEPFSIKLLDKATVPIIKLTD
RETDVKVDISFNVETGVKAARFIKDHLKKYSVLPYLIFVLKHFLLQRDLNEVFTGGISSY
SLILMVISFLQLHPRIDCRASNINLGILLIEFFELYGRHFNYLKTGIRVKDGGAYLAKEE
IMKVIENRYRPSMLCIEDPNLPGNYVGQSSYGAMQGKEVFNYAYLVLSHAVYPLSCSYPN
RNMESTLGRIIKVTQEVIDYREWIIQQWGNRHNARMMDIKVQNVEGDPEEQTSSEDQQRD
STSPHRAGSAVSLSSLHQQSSSSSSSSSSVSLLSGSDIDSDTPCKASVLHVFFPVSCMTD
NNKKPQRKANASGTFLHSRSQSHTLPSKQCMDGLTSVKGLVHMSPVYSSSIPSPSHYINN
GQRFKGPPHTYCLERNIVPIPRGHHPPYGRNSLRRRRRDTAPMSLSR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcgatctacaaacgcattctctgatcctgcacctccgtgtgtcacccctatcggagtc
aacggttgtgattcttcacctttatcttcaggagattccgagagtgacagtccgacatca
gattcctcgtctgccactagtgacagtatgagcgcacatccaaccaaacttcactttaac
ttttctgaacatctgcacaatttcaataacagtttacaacaacattaccagcggctacat
acacaaataattatggataaccaccttaaacaccatccagtaagaaagagaagtgacaat
aaagcgagtacatatggaatgaactactttatgtcccactctaatggcagtcatttatgt
gggaccccttgggcaaccagaagatacagtccaggtgtcaacggcctccatgaggagatg
gtggatttttatcatttcatgtcaccacgcccagaagaggaagaaatgaggagagatgtt
gtcaatcgtgttgagactgtaatcaaagatctgtggcccatggcaaaggttgaaatattt
ggcagcttcagtacaggactttatcttcctaccagtgatattgacctggtggtgtatgga
aaatgggaacaacctcctctgcagcagctggaccaggcactcaggcagaataaagtggct
gagccgttctccattaaactacttgacaaggctacggtaccaataattaaactgactgac
agagagacagatgtgaaggtagacatcagttttaatgttgaaactggtgtcaaagcagct
cggtttattaaggatcatcttaagaaatattccgtgttgccatacttgatctttgtgctg
aagcattttctgctccagagagatttgaacgaggtgtttacaggcggtatcagttcctac
agcctcattttaatggtcatcagcttcctgcagctccatcccagaatagactgcagagct
tccaatattaatttgggcatcctgctcattgaattctttgaattgtatgggcgccatttt
aattatctgaaaacaggcatccgtgtgaaggatggaggagcttatcttgctaaagaggag
atcatgaaggtcattgagaatagatatagaccctcaatgctctgtattgaggacccaaac
ttgccaggaaattatgttggccagagctcttatggtgccatgcaggggaaggaggtattt
aactatgcataccttgtcttgagtcatgctgtatatccactatcctgctcctaccccaac
agaaatatggaaagcacattgggacgcatcattaaagtgacccaggaagtaattgactac
agggagtggatcattcagcagtggggaaacagacacaatgccaggatgatggacattaaa
gtccagaatgttgaaggagacccagaggagcagacctcaagtgaggaccagcagagagat
tctacatcaccacacagagcaggctcagctgtatctctgtccagccttcatcagcaatct
tcatcttcctcatcttcatcttcctctgtgtccttgctgtctgggagtgacattgattct
gacacaccatgcaaagcttcagttcttcacgtgttctttccagtgtcgtgcatgactgat
aacaataagaaaccacagagaaaagcaaatgcatctggaactttcctccactccagaagt
cagtcgcacactttacccagcaaacaatgtatggatggtttgacttctgtgaaaggatta
gtccacatgtctccggtttactccagctcaatacccagccccagtcactacattaataat
ggccagagatttaaggggcctccacatacctattgtttagagcgtaacattgtgcctatc
cccagaggacatcatcctccgtatggtcgtaacagcttgcggaggcggcgaagggacact
gctcccatgagtctcagcagatag
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