Sinocyclocheilus rhinocerous: 107724113
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Entry
107724113 CDS
T04916
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107724113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107724113
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107724113
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107724113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
107724113
NCBI-ProteinID:
XP_016388393
UniProt:
A0A673IMQ5
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKLYNAANANQKEKYESDLKKEIKKLQRLRD
QIKTWVASSEIKDKRQLVENRKIIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEIGQWLANTIDTLNMQVDQFESEVESLSVQTKKKKGDKEKQDRVEELKQMIERHRFHI
RMLETILRMLDNDSIQVDAVRKIKDDVEYYLDSSQDPDFEENEFLYDDIDLEDIPQPLVA
TSPTGHTEDEIFQHSSSTPTSTTSSSPIPPSPATCTTNSEDDKKRGCSTDSEISQSPIKN
GNPSSSLSSSSSSSSSSSGASSNSLISMATVASSISLSSGSSSFLGNMGPLQNSGSYSSA
TQQQTQQSQQQHLPKNSVSSLSNANSASSSNSTLLPTSTSTSSPNTSTPGPLTPSSQSQH
PLGTGLSSSLGLGKRTPVTSGTNQMPGLVLSGMPASLNSMTGFLSGSTPAPYAQAAATGC
VGSGLSASIGMNISSTNSSGVVTSVGTNSLGSTSLLGSGPGVLGLGSTQSTVEPLPLVAP
ISVGGALTSGSNVGVIGSNGGTSGTGNAAGSAVLPRPPSGPKQNGGTSYSAVVADSTSDS
ALNSASQSQNSQSSSLNSSTNQPKDSGSSLLGLMTLPPSSPSVSYSECKAGGGSLLNGPH
SYTQAADTIKPQEPPSSLKSMAERVAQGSGLEGELSALHISSDIFPSSTAPSGTPAAPQS
ALSEVSIPPSLGVCPLGPVPHSKEQLYQQAMQESAWMHMPHPSDSERIRQYLMRNPCPTL
PFHQQVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWF
QRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaacttcaaggtgaaatagacagatgtttgaaaaaagttgcagaa
ggggtagagcagtttgaggacatttggaaaaagctctataatgcagccaacgccaaccaa
aaagagaaatatgaatctgacctcaagaaagagataaaaaaactacagcgtcttcgtgac
cagattaagacatgggtcgcctccagtgagatcaaagacaaacgacagctagtagagaat
cgcaaaatcattgagacgcaaatggagcgatttaagattgtggaacgggagaccaaaaca
aaagcgtactctaaagaaggactcggcctcgctcagaaagtcgatcctgcacagaaagag
aaagaagagatcggccagtggctagcgaacacgatagacacgttaaacatgcaagtggac
cagtttgagagcgaggttgaatcgctttctgtgcagaccaagaagaagaaaggagacaaa
gagaagcaggatcgggtcgaggaactgaaacaaatgatcgagaggcaccggtttcacatc
cgcatgctggaaaccatccttagaatgctggacaatgactcgatacaggtggatgccgtc
cgcaagattaaagatgacgtcgagtactaccttgattcctctcaagatcctgactttgag
gagaatgagtttctctatgatgacattgatttagaagacataccccagccactagttgcc
acatctccaacaggtcacacagaggatgagatcttccagcactccagttccacaccgacc
tccacaacgtcgtcatctcccatacctccctctccagctacttgcactacgaattcggaa
gatgataagaaaagaggttgttcaacagacagtgaaatcagccagtcacctatcaagaat
ggaaatccatcttcatctctatcctcctcttcctcatcgtcatcctcatcctcgggagcc
tcttcaaactctttgatctccatggcgactgtcgccagcagcataagtttgtcatcaggg
agcagcagcttcttaggcaacatgggccccctccagaactctggcagctatagttcagca
acccagcaacaaacacagcaatcccaacagcagcacctgcccaaaaactcagtctcctct
ctctccaacgccaactcggcctcctccagcaacagtaccttactcccaacatccacctcc
acgtcgtcgcccaacaccagcacaccgggcccactgacacccagctcgcagagccaacat
ccattgggaacgggcctttcctccagtctgggccttgggaagaggacgcctgtgactagt
ggcacaaaccagatgcccggtctggttctttcagggatgccggcatccttaaacagcatg
actgggtttttgagcggatccaccccggcgccttatgcacaagcggccgccacaggttgc
gtgggcagcgggctgtcagcgtcaattggaatgaatattagcagtacaaactccagtgga
gtcgtaacctcagtggggactaacagtctaggctccacaagcctcttgggctcagggcct
ggtgttctgggtcttgggtccacacagtccactgtggagcctttacctttggtggctccc
atctctgtgggaggcgcactgacctcagggagcaacgtgggagttatcggaagcaacgga
ggaacctctgggacaggaaacgcagcgggaagtgctgtgctaccacggccacctagtggg
ccgaaacaaaacggcggtacaagttatagtgctgtggtagcagacagcacgtcagactcc
gccctcaacagtgccagccaatcacagaatagccaatcctcatccttaaattcctcaaca
aatcagcctaaggacagtgggtccagccttctggggttgatgacactgccgcccagctcg
ccctcagtgtcatacagtgagtgtaaagcaggcggtggcagcctgctgaacggcccgcac
tcatacacacaggctgccgacaccatcaagcctcaggagcctccgagctctttaaagtcg
atggcagagagggttgcccagggctcagggttagaaggagagctgtctgcactacatatc
tcaagtgatatatttcccagctccacggccccttcaggcactcctgcagctcctcagtct
gctctgtcggaggtgagcatccccccgtcgttgggcgtgtgtccactgggccccgtcccc
cactccaaagagcaactctaccagcaagccatgcaggagtccgcctggatgcacatgcct
cacccgtccgactcggagaggatcaggcagtacctgatgaggaacccctgcccaacactg
ccttttcaccagcaggtgccacctcctcactccgacactgtggagttctaccagagactg
tctacagagaccctcttcttcatcttttactacttagagggtacaaaagcgcagtatcta
gcagccaaggccttgaaaaaacaatcatggaggttccacaccaagtacatgatgtggttc
cagaggcacgaggagcccaagaccatcactgatgagtttgagcaagggacatatatttac
tttgactatgagaaatggggccagagaaaaaaggaaggattcacatttgagtacaggtac
cttgaagaccgggacctccagtga
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