Sinocyclocheilus rhinocerous: 107724177
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Entry
107724177 CDS
T04916
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107724177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107724177
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107724177
Spliceosome [BR:
srx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107724177
Complex C
U5 SnRNP specific factors
107724177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
107724177
NCBI-ProteinID:
XP_016388471
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MAGDSSDKKDLDAAGKERESRKRSRSRSRDRDRKGSPGRERKRHRSRERKRSRSRSKSPD
RDRRLKDKERDRERSRKDRERDRDRRDKDRSKKSRSTSPKSKDLKIKREKDVKKEEEEEN
EKKKEKVQPLSLEELLAKKKAEEEAESKPKFLSKAEREAEAIKRREQQTEDRRKQVDEER
KKRRIFQDIGRKMLEDPQERERRERRERMERENNGNDEDDGRQKIREEKDKGKELQAIKE
RYLGGMKKRRRTRHLNDRKFVFEWDASEDTSTDYNPIYKEKHQVQLYGRGFIAGIDLKQQ
KRDQSRFYGDLMEKRRTLEEKEQEELRLKKVRKKEAKQRWDDRHWSQKKMDEMIDRDWRI
FREDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDII
GVAETVVDLMCFAPHSQIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDV
QKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQTVMFTATMPAAVERLARSYLRR
PAVVYIGSAGKPHERVEQKVILMSEGEKRKKLLDVLASGFEPPIIIFVNQKKGCDVLAKS
LEKIGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVLNYDMAK
NIEDYIHRIGRTGRAGKSGMAMTFLTKEDSSVFYDLKQAILESPVSTCPPELTNHPDAQH
KPGTILTKKRREETIFA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgactcctctgataagaaggacctggacgccgcagggaaggagcgggagtct
cgtaagcgcagtcgttctcgctccagggatcgtgaccggaaaggatctccgggcagagaa
cgcaaacggcaccgatcccgtgaacgcaagcgctcccgcagcagatccaaatctcctgac
cgagatcgtcgtctaaaagacaaagaaagagacagagaaaggagccgcaaagacagagaa
agagaccgggacagacgagacaaagaccggtccaagaaatcaaggagcacttctcctaaa
tccaaggatttgaaaataaagagggagaaggatgtgaaaaaagaggaagaggaggaaaat
gagaagaagaaagagaaggtgcagcctctttctcttgaagagctgcttgctaagaagaaa
gcagaagaagaggcagaatctaagcccaagttcttgtctaaagcagagcgggaagctgag
gccatcaaacggagggagcagcagacagaggatcgccgcaaacaagtggacgaggagagg
aagaaacgtagaatatttcaggacatcggcaggaagatgctagaggatcctcaggagaga
gaacggcgggaaagaagggagcggatggaaagagagaacaatgggaatgatgaagatgat
gggcgtcagaaaattagagaagaaaaagacaaaggaaaagagctgcaggccataaaggag
cgttatcttggtggtatgaagaaacggcggcgtacacgccatctgaatgacaggaagttt
gtctttgagtgggatgcgtctgaagacacatcaaccgactacaatccaatttataaagaa
aagcatcaggttcagctgtacggtcgaggcttcatcgccggcatcgacctcaagcagcag
aagagagatcagtctcgattctacggagacctgatggagaagagacggacccttgaggag
aaggagcaagaggaactgaggctgaagaaggtccgaaagaaggaggccaagcagcgctgg
gacgaccggcactggtctcagaagaagatggatgagatgatagacagagactggagaatc
ttcagagaggactacagcatcacgaccaaaggaggaaagatccccaaccccatccgcaac
tggaaggagtattcactgccgccacacattctggaggtcatcgaaaagtgtggctataag
gatcccacacctatccagaggcaggccattcctattggtttacagaaccgtgacatcatt
ggtgtggccgagactgttgtagatctgatgtgttttgctcctcattctcagattgtcata
gccacacctggtcgtttgatcgacgtgttggaaaaccgatacctcgtcctgagcagatgc
acatatgtggtactggatgaagccgacagaatgattgacatgggctttgaacccgatgtc
cagaagattctggagtacatacctgtgaccaatcagaagccagacaccgatgatgcagaa
gaccccgaaaaaatgatgcagaactttgagtcaggcaaacacaaatacagacagacggtc
atgtttacggccaccatgcctgctgcagtggagcgtttggccagaagttacctccgtcgg
cctgcggtggtgtacatcggctctgcaggcaaacctcacgagagggtggagcagaaggtc
atcctcatgtccgagggtgaaaagaggaagaagctgctggatgttttggcaagtggcttc
gagccgcccatcatcatcttcgttaaccagaagaagggttgtgacgtgctggctaagtct
ttggagaagattggatacaatgcttgtacacttcatggcggtaaaggtcaggaacagaga
gagtttgctctgtccaacctaaaggcgggagctaaggacatcctggtggccacagacgtg
gcaggcagaggtattgacatccaggacgtctctatggtcctcaactatgacatggccaag
aacattgaggactatatccatcgtattggccgaacgggtcgtgctggaaagagtggtatg
gcgatgactttcctgaccaaagaagactcttctgttttctacgacctgaagcaggccatc
ttagaaagtcccgtgtccacctgcccgcccgagctgaccaatcacccagacgcccagcac
aagcccggcaccatccttaccaagaagaggagagaggagaccatctttgcttga
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