Sinocyclocheilus rhinocerous: 107724334
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Entry
107724334 CDS
T04916
Name
(RefSeq) collagen alpha-2(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
srx
Sinocyclocheilus rhinocerous
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
107724334
NCBI-ProteinID:
XP_016388699
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MLTVLCVLLTLGNHALGAGYAPMPQMKYVQPMMKGPVGPPFREGKGQYLEFPPMMDIKGE
PGPQGKPGPRGPPGPPGLPGKPGIGKAGLNGQTGPSGPPGFPGFGKPGLPGLPGKLGPKG
PPGLNGEVGPRGEVGPRGLPGQPGPPGPAGLSLNGKPGLPGTRGPPGSRGDPGPKGGHGI
PGEQGPKGENGNGKPGPTGPRGPTGLQGPSGPPGVPGLGKPGIGGLPGQAGPKGDKGLPG
VQGVPGEAGPPGLQGQPGAAGVGKPGLDGAPGNPGPIGPKGEVGPRGTPGFPGPPGYGKA
GLVGQKGDRGPGGLQGAPGDKGEPGMDGLPGDTGPTGQPGLPGPQGPMGLPGKHGMPGLK
GENGPQGPPGLPGLRGDQGPSGLSGKPGLPGDKGLPGLNGATGKPGPKGEPGHIGLPGNP
GLIGGPGLKGENGLPGPPGPRGNSGIPGLPGPTGHMGPQGVPGLKGEQGPPGPQGIGKPG
DKGMPGPQGPPGRPGPPGFSGMQGPPGPPGPPGLPGPPNGDINQLAVQGPNIVGDSIPKP
NGEKPYFGQAELSASVAPAFTAILTTPFPPSGMPIKFDRTLYNGQNAYNPATGIFTSPLP
GVYYFAYHVHVKGTSLWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKENDQVWVQM
PSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagtgctctgtgtcctgctaacgctggggaatcatgccctgggggcaggttac
gcccccatgcctcagatgaaatatgtgcagcccatgatgaaggggcctgttgggccaccc
ttcagagaaggcaagggccagtatcttgagtttccacccatgatggacattaaaggggag
ccaggtcctcaagggaagccaggaccaaggggaccacctgggcctcctggattaccaggg
aaaccaggtataggaaaagctggtctcaatggtcaaacaggtccttcagggcctccagga
ttccctgggtttggaaaaccaggactaccagggttaccaggaaaactaggacctaaagga
cctcctggactcaatggtgaggttgggcctcgtggagaggtgggtccacgtggacttcca
ggtcagccaggaccacctggaccagcaggtctgtcgttgaacggcaaaccagggttacct
gggactagaggcccaccagggtcaagaggtgacccggggcctaaaggcggacatggtatt
cctggtgaacaaggaccaaaaggggaaaatggcaatggaaagccaggtccaacaggtccc
aggggacccactggccttcaaggaccttcaggacctccaggtgttcctgggttgggtaaa
ccagggattggtgggctgcctggacaagcagggccaaaaggagataaaggacttccagga
gttcaaggtgtcccaggggaagctggtcctcctggactacaaggtcagccaggggcagct
ggtgtgggaaaacctggacttgatggtgctccaggtaacccaggcccaataggtccaaag
ggtgaagttggccccagaggaactcctgggtttcctggcccccctggctatggtaaagca
gggcttgtaggacagaaaggagatagaggtcctggtggattacaaggagcccctggtgac
aaaggagaacctgggatggatggtctaccaggagatacagggccaactggacagccagga
cttccaggtccacaaggtcctatgggtcttccagggaaacatgggatgcctggtctaaag
ggagagaatggcccacaaggacctccgggcttgccaggacttagaggagatcagggtccc
agtgggctctcaggaaagcctggcctgccaggggataagggccttcctggtctcaacgga
gccacaggcaaacctggacctaaaggtgaaccgggtcacatcggactgccaggtaatcct
ggtttgattgggggaccaggtctaaaaggtgagaatgggttaccaggaccccctgggcca
cgtggcaattcaggcatccctggactcccaggccccactggtcatatgggacctcagggt
gttccagggttgaaaggcgaacaaggcccaccgggcccccaaggaattggaaagcctgga
gacaaaggtatgcctggtccacaaggacctccaggaagacctggccctcctggatttagc
ggtatgcagggccctccaggtccgcctggacctcctgggcttcccggcccaccaaatggt
gatataaatcagttagcggttcaaggaccaaatattgtaggagactccattccaaagcca
aatggtgagaaaccttattttggtcaggctgagctctctgcctctgtggctcctgctttt
accgccattttgacgacaccatttccaccatctggaatgccgatcaaatttgacagaact
ctgtataatgggcaaaatgcttacaaccctgccacgggcatcttcacaagcccactgcct
ggagtctactattttgcttatcatgtacatgtaaagggaaccagcctgtgggtggcactg
tataaaaacaatgtgccagccacatacacctatgatgaatacaagaagggctatatggac
caggcatcaggtagtgcggtactggagctgaaagagaatgaccaggtttgggtgcaaatg
ccctctgaccaagcaaatgggctctactccactgagtacatccattcgtccttctcaggt
ttcctcctgtgccccacataa
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