Sinocyclocheilus rhinocerous: 107724608
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Entry
107724608 CDS
T04916
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03430
Mismatch repair
srx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107724608 (mlh1)
03460 Fanconi anemia pathway
107724608 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107724608 (mlh1)
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107724608 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
107724608
NCBI-ProteinID:
XP_016389085
UniProt:
A0A673JCR6
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MAGVIRKLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKATNIQITVKEGGLKLILIQD
NGTGIRKDDMEIVCERFTTSKLQSFEDLSSIATYGFRGEALASVSHVAHVTITTKTADAK
CAYRASYCDGKLKAPSKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIIEVVSRY
AIHNSGKSFSVKKQGEMVADVKTLQNASVLDNIRAVFGVAVSRELIEVECEDQKLAFKMK
GYISNANYSVKKCILILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNI
DVNVHPTKHEVHFLHEDSIIESVQKHIESKLLGSNSSRTYFTQTLLPGLSASTNASKASS
SSADSQERVYAHQMVRTDSKVQKLDAFLQPSTSSSAAQSRSDKASSSSTAAQGSAEPDHL
ELLTALDVLEPCDAEDPQTDSQPPPDEAPPRKRPHVEEVKEDLTAASLPRRRFIKLTSIK
ELREDIEQHTHKGLQDLLQNHSFVGSVNPQWTLVQHQTKLYLLNTTKLSQELFYQILIYD
FGNFGVLRLSNPAPLYDLAMLALDSEESGWTDEDGPKEGLAQYIVDFLKQKAVMLEEYFS
LEIDEEGNLTGLPMLLDNYTPAMEGLPMFILRLATEVNWDREKECFHDFGIECSHFYSIR
KQYTLEPDAEEPQDAEMSWQWKVEHVLFKALRTLFSPPKHFSEDGSVLQIASLPELYKVF
ERC
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtcatccgcaaactcgatgagactgtagtgaaccgcatcgcagcaggagag
attatccagcggcctgccaatgctatcaaagagatgatggagaactgtttggatgcaaag
gccacaaatatccagataacagtgaaagagggcggactgaagctcatcctcattcaggac
aacggcactggcatcaggaaagatgatatggaaatagtctgtgagcgttttacaaccagc
aagcttcagtcttttgaggacttgtcatcaatcgcaacatatggattcagaggggaggct
ctcgccagtgtaagtcatgtagcccatgtaacaattaccactaaaacagccgatgcaaaa
tgtgcctacagggccagttactgtgatgggaagctgaaagctccatctaaaccctgcgct
ggaaaccaagggacattgatttctgtagaagatctgttctataatgtgtctacccgacgg
aaagccctgaagagccccagtgaggaatattctagaatcattgaggttgtgagcagatac
gccattcacaactctgggaaaagtttttctgtcaagaagcaaggtgagatggttgcagat
gtgaagacccttcagaacgcctctgtgctggacaacattcgtgcggtgttcggtgtagct
gttagcagggagctgattgaagttgagtgtgaagatcagaaactcgcttttaaaatgaag
ggctacatctccaatgccaactactctgtcaagaaatgcatccttatcctttttatcaac
catcgcttggtggagtctagtgccctgaaaaaagcaattgagactgtctacactgcttat
ctacccaaaaacactcatccttttctttatcttagtttagagattgctcctcaaaacatt
gacgtgaacgttcaccccaccaagcacgaggtgcacttcctgcatgaggacagcatcatc
gagagcgttcagaaacacatcgagagtaaactgctcggctcgaactcttcacgcacatac
ttcacacagactttgcttccaggactttcggcgtccaccaacgcgtcaaaagcctctagt
tcctcagcagattcccaggagcgagtatacgcccatcagatggtccgcactgacagcaaa
gtccagaagctggatgcgtttctccagccatcaacctcatcgtctgctgctcagagcagg
tcagataaagcctccagctcttccactgctgctcagggttcagccgaaccagaccacttg
gagctgctgactgctctggatgttctggagccgtgtgacgcagaggatccacagacagac
agtcagcctcctcctgatgaagcaccaccaaggaaaagacctcatgttgaggaggtgaag
gaggatttgacggccgcctctcttcccaggagacgcttcattaaactgaccagcataaag
gagctccgggaagatattgagcagcatactcacaaaggtttacaggatctgctccagaat
cactcattcgtaggttcagtcaatcctcagtggactctagtgcagcaccagaccaaactc
tacctgctcaatacaaccaaactcagccaggagctgttttatcaaattttgatctacgat
tttggtaacttcggggttcttcgattgtcgaatccagctccgctctatgatttggccatg
ttggctctggattcggaggagagtggatggacggacgaggacggtccaaaagaaggactg
gcccagtatatcgtggattttctgaagcagaaagcagtaatgctggaagagtacttttct
ctggaaatagatgaagaagggaacctgactggtctgccaatgctgcttgataattacact
cctgctatggagggacttcccatgttcattctgcgtttagccacagaggtgaactgggat
cgagagaaggagtgttttcatgacttcggcatagaatgcagtcacttctattccataagg
aaacaatacacactggagccggatgcagaagagccacaggatgcagagatgagctggcag
tggaaggtggagcatgtgctttttaaagcactccgcactctcttcagtcctccaaaacac
ttcagtgaagacggcagcgttctgcagatagccagcctgcctgaactctacaaagtgttt
gaaagatgctaa
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