Sinocyclocheilus rhinocerous: 107724702
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Entry
107724702 CDS
T04916
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03430
Mismatch repair
srx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107724702
03460 Fanconi anemia pathway
107724702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107724702
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107724702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
107724702
NCBI-ProteinID:
XP_016389204
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MSDSSTGSAGAIKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDSGI
ELVEVSDNGKGVEEQNFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSVV
TCHESAQIGARLVYDHDGHLTQHVPHPRQHGTTVTLQKLFSTLPVRHKEFQRNIKKEYSK
MIFVLQSYCIISTGVRITCANQTGQGKRTTVLCTSESNGMRDNIGAVFGPKQLQSLIPFQ
QISPGESIKEDYGLGEVDVPKDLFVIDGFVSQADHGVGRSATDRQFFFINKRPCDPIKAS
KLVNEVYHMYNRHQYPFVALNITVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAMF
ETGVNKISLNHITPAITNLCRPTETSAGSEDREIGSVSEALPDDEPPKTSISLARLKEAF
SNHQFPGIGSKQSSHKAACSGSSQKKMFSFVSCSKKMTDIMRPPLKSSPSFAAVSSIKKS
TVCLAKYKSTFDSDAEDSEAANQNSAEDDPEILHENNSESGLHPSTYETDVKAETINEPV
DEKFWSYKPLVPETVSEQHQDRISNPEAKRSRHEAEPLAQNRLVDSKNKNASTQLDSPVS
IQKKTVLLPFSLKELSKRMQRLQAQKKENNDQEPKYRRFRANINPGENQSAEDELKKEMS
KDMFKDMEIIGQFNLGFIITKLKSDLFIIDQHATDEKYNFEMLQKNTVLKGQRLIAPQSL
HLPAISETVLMENLEIFRKNGFDFLIDEDAQVMERVKLVSLPTSKNWTFGPSDIEELIFM
LSDSPGIMCRPSRVRQMFASRACRKSAMVGTALNTSEMKKLVLHMGEIEQPWNCPHGRPT
MRHLANLDMVS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactcaagcacaggttctgctggagccataaaggcaatagacaaacagtctgtg
catcagatctgctctggacaggtggtgctgagtctggccacagctgtgaaagagctggtg
gagaacagcattgatgctggtgccactaatgtcgatgtcaagctaaaagacagtggaata
gagttagtggaggtttccgacaatggaaaaggtgttgaggagcaaaactttgagggacta
actttaaaacatcacacctctaaactaagagatttttccgacctgatacacgtggagacg
tttgggttccgtggtgaagctctgagctcactttgtgctcttagtgatcttagtgttgtg
acctgccatgagagcgctcagatcggagctcggctggtgtatgaccatgatggtcatctc
actcagcatgtgccgcatccccgccaacatggcacaactgtcactctgcagaaactcttc
tccacattacctgtccgacacaaggagttccagcgcaacatcaaaaaggaatattccaag
atgattttcgtcttgcagtcctactgcatcatctccactggtgtgcgtattacatgcgcc
aaccagacgggacaaggcaagcgcaccacagtactgtgcaccagtgagagtaacggcatg
agagacaacattggagctgtgtttggacctaaacagctacaaagtttgattcccttccaa
caaatatctcccggtgaatcaattaaggaagactatggtctcggggaggtagatgttcct
aaagacctttttgtcattgacgggtttgtgtcacaagcggatcatggtgttggtcgaagt
gctactgacagacagttcttctttatcaataaaagaccctgtgatccaataaaggcctcc
aagcttgtgaatgaggtttatcacatgtacaatcggcatcaatacccttttgtcgctcta
aacatcactgttgcttcagactgtgtggacgtgaatgtgactccagacaaacgtcagatc
cttctacaagaggaaaaactcttgctggcaattctgaaaagctcactcattgcaatgttt
gagactggtgtcaataaaatcagtctcaatcacattactccagcaattaccaacttgtgt
agaccaaccgagacaagtgctggttcagaagatcgggaaataggttctgtctctgaagca
cttccagatgatgaacccccaaagacttccatcagtctagctcgacttaaagaagcattt
tcaaaccatcagtttcctggaattgggtcaaagcagtctagtcataaagctgcctgttct
ggttcttctcagaagaagatgttttcctttgtgagctgctctaaaaaaatgacagacatt
atgaggccacctttaaagtcctctccaagtttcgctgctgtttcttccataaaaaaatca
actgtttgtctagctaaatataaaagcacctttgatagtgatgctgaagattctgaggct
gcaaaccaaaattcagctgaagatgatccagagattttacatgaaaacaattcagagtca
ggtttacaccctagtacatatgaaactgatgttaaagctgagactatcaatgaacccgta
gatgagaagttctggagttataaacctttggtgccggagacagtgtcagagcaacaccag
gacagaatttccaatcctgaagctaaaagatctcgacatgaagctgaacctctagcacaa
aaccgtttggtggactctaaaaacaagaatgcttctacgcaattggattcacctgtcagc
atacagaagaaaacagtgcttttgccgttttctctgaaggaactttctaaaaggatgcag
aggctgcaggctcagaagaaagagaacaatgatcaagagccaaaatatagacggttcagg
gcaaatattaaccctggtgaaaaccagagtgctgaggacgagcttaagaaagaaatgagc
aaagatatgttcaaggatatggaaatcattggtcagttcaacctgggttttattatcacc
aagctgaaatctgaccttttcataattgaccagcatgccacagacgaaaagtacaatttt
gagatgctacaaaagaatacggtcttaaagggacagcgactcatagctccacaaagtctc
cacctcccagctatcagtgaaactgtgctcatggaaaaccttgaaatcttcagaaagaat
ggttttgacttcctcattgatgaggatgctcaggttatggagagggtgaagctggtgtct
ttacctacaagcaagaattggacctttggcccaagtgacattgaagaactcatcttcatg
cttagcgacagtcctggaatcatgtgtcgaccttctcgtgtgaggcagatgtttgcatcc
agggcatgtcgcaaatcggcgatggttggcactgccctgaacaccagtgaaatgaagaaa
cttgtgcttcacatgggggaaattgaacagccctggaattgtccacatggtagacccacc
atgagacaccttgctaatctggatatggtttcttag
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