KEGG   Sinocyclocheilus rhinocerous: 107724722
Entry
107724722         CDS       T04916                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107724722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:srx03009]
    107724722
Ribosome biogenesis [BR:srx03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    107724722
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Utp13 Beta-prop_EML Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_Aladin ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_VPS8 Beta-prop_Vps41 WD40_RFWD3 WD_LRWD1 Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Cytochrom_D1 Pox_TAP
Other DBs
NCBI-GeneID: 107724722
NCBI-ProteinID: XP_016389234
LinkDB
Position
Unknown
AA seq 782 aa
MAGNTLPFKSNYAVSSKIEPFYKGGKVQISQDEQYIFCTCGPRVNILQIDTGKIIHSIEQ
DDQEDITSFSLSPDDEILVTASRALLLKQWDWKQEKCTRSWRAIHNVPVASMTFDCTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSVDCGIRIWDLR
TSKCICVLESHYSAVTSLAFSPDGQTLISSGRDKICSVWDLKKKAVKRTVPVYEAVEGVV
VLPGKSDYSQMGVKGEGLHFVTAGSKGVLRVWDSSSARCVFTQTLPDAPALNTEEADLDP
RSLMHLLPMPQSNRLATVTAEHNILIYQMPALTVQQQFVGYNDDILDVKFLGKDDTHIVV
ATNSSQLKVFELATNSCQILYGHTDTILSIDVFRKGSMFASCAKDKSLRLWKMDLKSGHV
HCVAQGSGHSNAVGSVACSRLKKGFLVSGSQDCTIKMWDLPDPLPDVGCEPVLMTARLTE
RAHDKDVNSVTISPNDKLLASGSQDRTAKLWSLADMSLLGIFRGHSRGVWCVQFSPVDQV
LATASADGSIKIWSIQEFSCLRTFEGHDASVLKVIFVSRGTQLVSSGSDGLVKLWTIKTN
ECVKTFDAHQDKVWALHGSSKDDLMVTGSADSTITLWKVSPPDISYLSKIRQQEDGIQEL
EKTLLKLRQDQKESVLRFSVVWNTNSRSCLDAQAVLQVLLTHLSPEEILQYQGTRTHLEG
LIPYTERHMQRIGRLLQASMFLDYMWQKMRITGGKDRTDVKTCASQPSADVWRHSLPVDT
HH
NT seq 2349 nt   +upstreamnt  +downstreamnt
atggctggaaacacgctgccgtttaaatcaaattatgcagtctccagcaaaatagaaccg
ttctataagggaggtaaagtgcagataagtcaggatgagcagtacatattttgcacatgt
ggtccaagagtcaacattttacagatcgatactggaaaaattatccatagcattgagcag
gatgatcaagaggacatcacctcattctctctcagtcctgatgatgagattctggtgacc
gccagcagggctctgctcctgaagcagtgggactggaagcaggagaagtgcactcggtcg
tggagggccatccacaatgtgcctgtggccagcatgacctttgactgcacctccaccctg
ctggctacaggtggttgtgatggcaccatcaagctgtgggatgttgtgaagcagtactgc
acacacaatctgaaaggatcatctggcgttgtacatttggtcgagtttcatccagacatc
agcagactgcagctcttctcttcttctgtggactgtgggatccggatctgggacctgagg
accagcaagtgtatctgtgttttggagagccactacagtgccgtcacatcgctggccttc
tctcctgatggccaaactctaattagttctggccgagacaaaatctgctcggtttgggac
ctgaagaagaaggctgttaagaggactgtccctgtctatgaggctgtggaaggtgttgtt
gttctccctgggaagagcgattactctcagatgggtgtgaagggtgaaggtttacacttt
gtcacggctggcagtaaaggtgttcttcgagtgtgggactccagctcagcgcgctgtgtg
ttcactcagacgctgcctgatgctccggctctcaacacagaggaggccgatttagacccg
cgcagtctgatgcatcttctgcccatgccacagtccaacagactggccaccgtcaccgca
gagcacaacatcctcatctatcagatgcctgctctcactgtacagcagcagtttgtcggc
tacaatgatgatatcctggatgtgaagttcctggggaaggatgacacacacatagttgtg
gccactaacagctctcagctgaaggtgtttgagttggccactaacagctgtcagattctg
tatggacacacagataccatcttatcaatcgatgtcttccgcaaaggttccatgtttgca
agctgtgcaaaggacaagtccctgcggctgtggaaaatggatctgaagagtggccacgtg
cactgcgtggctcagggcagcggacactccaatgccgtgggctctgtcgcctgctccagg
ttaaagaaaggcttcctggtgtcgggcagtcaggactgtactattaagatgtgggatctg
cctgaccctcttcctgatgtgggatgtgaaccggtcttgatgacggcacgactcacagag
agagctcatgacaaggatgtgaacagcgtgaccatctctcccaatgacaagctgctggcc
tctggctctcaggatcgcacggctaaactctggtcactggcagatatgagtctgttaggc
atcttcagaggtcatagtcgaggtgtttggtgtgtccagttctctcctgtggaccaggtc
ctggccacggcctcagcggacggctccatcaaaatctggagcattcaagaattcagctgc
ctcaggacgtttgagggacatgatgcctctgtgctaaaggtcatatttgtcagtcgagga
actcaactagtgtctagtggttctgatggacttgtgaagttgtggaccataaaaacaaac
gagtgtgtgaaaacatttgatgctcaccaggacaaagtgtgggctctgcatggcagcagc
aaagatgacctgatggtgacgggatcagctgactccaccatcacactgtggaaggtcagt
ccacctgacatatcctacctgagcaaaattcggcagcaggaggatgggatacaggagcta
gaaaagaccctcctgaagctccgtcaggatcagaaagagtcggtgttgcgattctctgtg
gtgtggaacactaattcccgcagctgtctggacgctcaggccgtcctgcaggtgctgctc
acacacctgagcccagaggaaatcctgcagtatcagggcactcgtacccatctcgagggc
ctcataccgtacacagagagacatatgcagcggattggtcgtctcctgcaggcctcaatg
tttctggattacatgtggcagaaaatgcgtattacgggtggtaaagacaggacagacgtt
aaaacctgtgcctcacagccatcggctgacgtctggcgtcactcattgccagtggacacg
caccattag

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