Sinocyclocheilus rhinocerous: 107724722
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Entry
107724722 CDS
T04916
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107724722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107724722
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107724722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Utp13
Beta-prop_EML
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_DCAF12
PEP5_VPS11_N
Beta-prop_VPS8
Beta-prop_Vps41
WD40_RFWD3
WD_LRWD1
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Cytochrom_D1
Pox_TAP
Motif
Other DBs
NCBI-GeneID:
107724722
NCBI-ProteinID:
XP_016389234
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MAGNTLPFKSNYAVSSKIEPFYKGGKVQISQDEQYIFCTCGPRVNILQIDTGKIIHSIEQ
DDQEDITSFSLSPDDEILVTASRALLLKQWDWKQEKCTRSWRAIHNVPVASMTFDCTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSVDCGIRIWDLR
TSKCICVLESHYSAVTSLAFSPDGQTLISSGRDKICSVWDLKKKAVKRTVPVYEAVEGVV
VLPGKSDYSQMGVKGEGLHFVTAGSKGVLRVWDSSSARCVFTQTLPDAPALNTEEADLDP
RSLMHLLPMPQSNRLATVTAEHNILIYQMPALTVQQQFVGYNDDILDVKFLGKDDTHIVV
ATNSSQLKVFELATNSCQILYGHTDTILSIDVFRKGSMFASCAKDKSLRLWKMDLKSGHV
HCVAQGSGHSNAVGSVACSRLKKGFLVSGSQDCTIKMWDLPDPLPDVGCEPVLMTARLTE
RAHDKDVNSVTISPNDKLLASGSQDRTAKLWSLADMSLLGIFRGHSRGVWCVQFSPVDQV
LATASADGSIKIWSIQEFSCLRTFEGHDASVLKVIFVSRGTQLVSSGSDGLVKLWTIKTN
ECVKTFDAHQDKVWALHGSSKDDLMVTGSADSTITLWKVSPPDISYLSKIRQQEDGIQEL
EKTLLKLRQDQKESVLRFSVVWNTNSRSCLDAQAVLQVLLTHLSPEEILQYQGTRTHLEG
LIPYTERHMQRIGRLLQASMFLDYMWQKMRITGGKDRTDVKTCASQPSADVWRHSLPVDT
HH
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaacacgctgccgtttaaatcaaattatgcagtctccagcaaaatagaaccg
ttctataagggaggtaaagtgcagataagtcaggatgagcagtacatattttgcacatgt
ggtccaagagtcaacattttacagatcgatactggaaaaattatccatagcattgagcag
gatgatcaagaggacatcacctcattctctctcagtcctgatgatgagattctggtgacc
gccagcagggctctgctcctgaagcagtgggactggaagcaggagaagtgcactcggtcg
tggagggccatccacaatgtgcctgtggccagcatgacctttgactgcacctccaccctg
ctggctacaggtggttgtgatggcaccatcaagctgtgggatgttgtgaagcagtactgc
acacacaatctgaaaggatcatctggcgttgtacatttggtcgagtttcatccagacatc
agcagactgcagctcttctcttcttctgtggactgtgggatccggatctgggacctgagg
accagcaagtgtatctgtgttttggagagccactacagtgccgtcacatcgctggccttc
tctcctgatggccaaactctaattagttctggccgagacaaaatctgctcggtttgggac
ctgaagaagaaggctgttaagaggactgtccctgtctatgaggctgtggaaggtgttgtt
gttctccctgggaagagcgattactctcagatgggtgtgaagggtgaaggtttacacttt
gtcacggctggcagtaaaggtgttcttcgagtgtgggactccagctcagcgcgctgtgtg
ttcactcagacgctgcctgatgctccggctctcaacacagaggaggccgatttagacccg
cgcagtctgatgcatcttctgcccatgccacagtccaacagactggccaccgtcaccgca
gagcacaacatcctcatctatcagatgcctgctctcactgtacagcagcagtttgtcggc
tacaatgatgatatcctggatgtgaagttcctggggaaggatgacacacacatagttgtg
gccactaacagctctcagctgaaggtgtttgagttggccactaacagctgtcagattctg
tatggacacacagataccatcttatcaatcgatgtcttccgcaaaggttccatgtttgca
agctgtgcaaaggacaagtccctgcggctgtggaaaatggatctgaagagtggccacgtg
cactgcgtggctcagggcagcggacactccaatgccgtgggctctgtcgcctgctccagg
ttaaagaaaggcttcctggtgtcgggcagtcaggactgtactattaagatgtgggatctg
cctgaccctcttcctgatgtgggatgtgaaccggtcttgatgacggcacgactcacagag
agagctcatgacaaggatgtgaacagcgtgaccatctctcccaatgacaagctgctggcc
tctggctctcaggatcgcacggctaaactctggtcactggcagatatgagtctgttaggc
atcttcagaggtcatagtcgaggtgtttggtgtgtccagttctctcctgtggaccaggtc
ctggccacggcctcagcggacggctccatcaaaatctggagcattcaagaattcagctgc
ctcaggacgtttgagggacatgatgcctctgtgctaaaggtcatatttgtcagtcgagga
actcaactagtgtctagtggttctgatggacttgtgaagttgtggaccataaaaacaaac
gagtgtgtgaaaacatttgatgctcaccaggacaaagtgtgggctctgcatggcagcagc
aaagatgacctgatggtgacgggatcagctgactccaccatcacactgtggaaggtcagt
ccacctgacatatcctacctgagcaaaattcggcagcaggaggatgggatacaggagcta
gaaaagaccctcctgaagctccgtcaggatcagaaagagtcggtgttgcgattctctgtg
gtgtggaacactaattcccgcagctgtctggacgctcaggccgtcctgcaggtgctgctc
acacacctgagcccagaggaaatcctgcagtatcagggcactcgtacccatctcgagggc
ctcataccgtacacagagagacatatgcagcggattggtcgtctcctgcaggcctcaatg
tttctggattacatgtggcagaaaatgcgtattacgggtggtaaagacaggacagacgtt
aaaacctgtgcctcacagccatcggctgacgtctggcgtcactcattgccagtggacacg
caccattag
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