Sinocyclocheilus rhinocerous: 107725145
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Entry
107725145 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-like
KO
K06252
tenascin
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
srx04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107725145
04518 Integrin signaling
107725145
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107725145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
srx00536
]
107725145
Glycosaminoglycan binding proteins [BR:
srx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107725145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_PBP1
Fn3_Dep-1_2nd
DUF7949
EGF
SPE9_EGF_3rd
Motif
Other DBs
NCBI-GeneID:
107725145
NCBI-ProteinID:
XP_016389793
LinkDB
All DBs
Position
Unknown
AA seq
2458 aa
AA seq
DB search
MGSGGLTFSCLVLATLMTLNHAGLVKKMIRHRREDLTIPGIHNITLPTSSQPLVFNHVYN
IKVPGSSLCSADLDSPAGSDLEQKDAPSGSEVTDHTLDSSNQIVFTHRINIPKQACGCME
GLPDLKELLNRLEMLEGEVSTLREQCATETTCCSAQATGAIGTKPYCNGRGNYSTDTCGC
ICEPGWKGPNCTVPDCPRDCSDQGRCVNGKCECFDGFTGEDCSVETCPVDCGENGRCVNR
VCVCNEGFSGDDCTETDCLNNCLGHGRCIDSECVCDEPWTGFDCSELICPHDCYDRGRCD
NGTCYCDKGFTGEDCGTIACPNDCSGRGFCIDGHCVCIAGYSGEDCSSLTCPNDCNQRGR
CFNGVCICETGYFGEDCGKLSCLNNCNGRGRCIDGHCECNVGFQGHDCSEFSCPNNCNNR
GRCDNGQCVCEEGFGGEDCSIKSCPSECYGRGQCVDGKCICFADFTGGDCSELSCPSNCL
KRGRCVAGQCVCDEGFTGEDCGQRKCHNDCLGRGRCVEGQCVCQKGFEGLDCSVHLSWKS
CPSDCYGRGQCVDGKCICFADFTGGDCSELSCPSNCLNRGRCVAGQCVCDEGFTGEDCGQ
RKCHNDCLGRGRCVEGQCVCQKGFEGLDCSVPTCPGNCNNRGRCLNGKCVCDKGFVGDAC
GERSCPNDCSGVGQCVDGRCVCDEGHIGEDCSEVSPPEDLTVTDVTTEKVNLTWKNEMLV
TEYLVTYVPTSPGGLQLDFRVPGDRTSATVSELEPGIEYLINVYAVLNNKKSVPVSARVA
TYLPQPEGLKFKSISDTSVEVLWDQLNVPFDGWELIFRNTKEENGKIVNNLTPSQTNFEQ
PGLGPGQEYEVTLSVIKNNTRGPGTNSTVVTRIDSPGQLDVGDVTDRSAVISWSRPLAEV
DGFRVSYGPSTDPLVHRDVDLPATHTQYSLEDLKPDTEYRVSLSSKRGDVTSEPIFESFT
TGLDAPTDLKAVDQTDSSITLEWKNSRSSIDGYRIKYGPIAGGAHGEDMFPRRAGDTTWA
TITGLKPGTEYGIGVTAVQNERESEPVTTNALTDLDPPRDLEVRDSTETTLELVWKRPRA
KISTYRLAFVSADGRREEVELPATATAYTLSGLSPGMRYTVTLVAERGRRRSAPATVTAS
TASFTFYLANTFPELGSAKGTDDNVISFVSLDNSEIPFSGSGYKDPTGTLTVSNVTSEGF
DLAWESNKHIGYDSYTVELKDFSGKWKEEVHLHGEVNDTKIRGLKASTEYQVRLYGISNN
QRSSLLEAVAVTAPKSTSPDVVALTFTSVSTTLPSLHKEVQPSVSTSTLLTEDFKAEASG
DELEDPNQGPPGDLNVTDVSRNSLRLSWSAPDGVFDSFIVELNSTSNKSKDSVIEVSGEA
RQVHVDGLNPDTLYEITLCGMKEGEKSQPVNVHIKTEEQRPQIGSLSVSDVSWDSFNVSW
TIEDDSAFDSFVIEVANAAGPERQDLSVSGDARSLWMSGLSPDTSYIITLYGVHQGSILG
SIYTQAATDSAPVVGNLYVSNITSESFSISWNDTRGDIERFILEIIDSSWQREPVEYNLS
QSTQSYEITGLRPTTDYIAYLTGVVKRRRTDSVSAVASTAAEPDLSGLVVSNITSDTVSL
SWRMGEKAFDNFIVEVRESALPTQATGRTLPGGVRSTVLTGLRGDTRYQIKLYATFGGTN
TAALTTVVTTEPKPKLGPIVVSETRPNSLTLSWSTLSGHFDGFAARVTDREQLYDVVELR
LSGAERNLTVTGLMDSTVYDIGFYGLSHGRQTPAVSFNTSTASLPRVENLTVSDITPYGF
RVSWAADSSEGFRHFQVKVSDSGQLLEPQEFVVPGNQTVLDVLGLITGIGYEVSVTGVSG
NGLQSRPITTVAVTEAEPEIEHLFVSDVTPESFRLAWTAEDDIFDRFVLKVRDSRKLSHP
REFVVPGDDRTKVLTQLLGGTEYEIELYGVTLEHRSQPITAVARTGLGALRDLRFSDITD
TTAVASWTVPRSQPDSYRITYIPVQGGTPVILTADGSQSQVSLTKLIPGEAYQMSVVAVK
GLEESEPVSDTFTTALDTPRSLTAVNVTDTKALLLWQPAVATVDGYVITYSADTVPPISE
QVSGNTVEFEMSSLAPATQYTVNVYAIRNREKSAPATTDFTTDVDAPRDLVASNIQTDSA
VLTWTPPRAAITGYILTFQASDGDVRELNLEPSATSHSLSDLSSSTEHTVRLQAVAEDKR
STQISSVFSTVGMRYRNGKDCSEALLNGETSSGPYTIYISGDEKQPVRVYCDMSTDGGGW
MVFLRRQSGKVDFYRNWRNYSAGFGDTNDEFWLGLSNLHKITSAGQYELRVDLRDGQESV
FAVYDKFYIADPRSRYKIQIGAYSGTAGDSLSYHQNRPFSTYNNDNDIAVTNCALSYKGA
FWYKNCHRVNLMGKYGDSSHSKGINWFHWKGHEHSIPFTEMKIRPVNFRNLEGRRKRS
NT seq
7377 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaggaggcctgacattcagctgtttggttttggcaaccctgatgactctaaat
cacgccggcctggtaaagaagatgatcagacaccgacgggaagatctgacgattcccggc
atacacaacataacccttccgacctcttcccaaccgctcgtttttaaccacgtctacaac
atcaaagttcccggcagctctttatgctcggcggatctggactctcccgctggttcagat
cttgaacagaaggatgcaccatctggctcagaagtaacagaccacacactggacagcagt
aatcagatcgtcttcacccaccgcatcaacatccccaagcaggcgtgtggttgtatggag
ggactgccggacctgaaggagctcctgaatcggctggagatgttggagggcgaggtgtcg
acgctcagagagcaatgcgccacagaaaccacctgctgcagcgctcaggccacaggtgct
ataggaacaaagccctactgcaacggccgtggaaactacagcacggacacctgcggctgc
atctgcgagcccggatggaagggccccaactgcaccgttcccgactgtcccagagactgc
agcgaccagggccgctgcgttaacggaaagtgcgagtgtttcgatggctttacgggtgag
gactgcagtgtggagacctgtccggttgactgtggtgagaacggccgttgcgttaacaga
gtgtgcgtttgcaatgaaggcttctccggagacgattgtacagagacggattgcctcaac
aactgtttgggacacggccgctgcattgatagcgagtgtgtctgcgacgaaccctggacc
ggatttgattgctccgagctcatctgtccgcatgactgctacgaccgcgggcgatgtgac
aacgggacttgttattgtgataaaggcttcaccggagaggactgcggcacgattgcttgt
ccgaacgactgctcgggacgaggtttttgcattgacggccattgtgtatgcattgctggc
tactccggcgaggattgttccagcttgacctgtccgaacgactgcaaccaaagagggcgc
tgtttcaacggcgtttgcatttgcgaaacgggttatttcggagaggactgcgggaagctc
tcctgtctgaataactgcaatggtagagggcgctgcatcgacgggcactgcgaatgcaac
gtcggattccaaggtcatgattgttcagagtttagctgccccaataattgcaacaaccgc
gggcgctgcgataacggccagtgcgtttgcgaagagggattcggcggcgaggactgcagc
atcaaatcctgcccgtcggaatgctacggacgaggccagtgcgtggacgggaagtgcatt
tgctttgcggacttcaccggcggagactgcagtgaattgagctgcccaagcaactgcctg
aaacgcggacgctgcgttgcgggacagtgcgtttgcgacgaaggcttcaccggagaggac
tgcggtcagaggaagtgtcacaacgactgtctcggccgcggacgctgcgtggaaggacag
tgtgtttgccagaagggttttgagggcctggattgctccgttcacctgtcctggaaatcc
tgcccgtcggactgctacggacgaggccagtgcgtggacgggaagtgcatttgctttgcg
gacttcaccggcggagactgcagtgaattgagctgcccaagcaactgcctgaaccgcgga
cgctgcgttgcgggacagtgcgtttgcgacgaaggcttcaccggagaggactgcggtcag
aggaagtgtcacaacgactgtctcggccgcggacgctgcgtggaaggacagtgtgtttgc
cagaagggttttgagggcctggattgctccgttcccacctgtcctggaaactgcaataac
cgtggacgctgcctcaatgggaaatgtgtgtgcgacaagggattcgttggagacgcctgt
ggagaaagaagctgtccgaatgattgcagtggtgtggggcaatgtgtggacggccgctgc
gtgtgtgatgaaggccacattggcgaggattgctcagaagtctcaccaccggaagacctg
accgtcacggatgtgaccacggagaaggtgaacctcacatggaagaacgagatgctggtg
acggagtatttggttacgtacgtcccgacgtcaccaggtggcctgcagctggacttccgt
gtgcctggagatcgtacgtctgctaccgtctctgagctggagccgggaatcgagtatctc
atcaatgtttatgccgtcctcaacaacaagaagagcgttcctgtcagcgccagagtggcc
acatatcttccgcagcccgagggcctgaagtttaaatccatcagtgatacgtctgtggag
gttttgtgggaccagctgaacgttccattcgacggctgggagctcatcttccgtaacacg
aaggaagaaaacgggaagatagtgaacaatctgacaccttcccagaccaactttgagcaa
ccgggactcgggccgggacaggaatatgaagtgactttgtcggtcataaagaacaacacc
agaggacccggaacaaactcgactgtagtaacaagaatcgattctccagggcagcttgac
gttggcgatgtgacagaccggtctgcagtgatctcctggtccagacccctggctgaggtg
gacgggttcagggtatcgtacgggccgagcacagacccgttagtccatcgagatgtcgac
ctcccggccacacacacgcagtacagcctagaagacctgaaaccagacactgaatacaga
gtgtctctcagttcaaagaggggagatgtgaccagcgagcccatctttgagagtttcacc
acaggtctggatgcccccactgacctcaaagctgttgatcagactgacagcagcatcaca
ctggaatggaaaaacagccgctcatccatcgacggataccgtatcaaatacggcccgatc
gcaggaggtgcccatggtgaagacatgttccctagaagagctggagatacgacatgggcc
acgattacaggcctgaagcctggaacggagtacggcattggagtcacagccgttcagaac
gaaagagagagtgagccagtgaccaccaacgcactgaccgatctggatccgccacgcgac
ctggaagtgcgagactccaccgaaaccaccctggaactggtctggaagaggcccagggcc
aagatctccacctacaggctagcgtttgtctctgccgacggccgtcgggaagaagtcgag
ctgcctgctactgcaaccgcctacaccctgagcggcttgagccctggcatgcgctacacc
gtcaccctcgtggcagaacgtgggcggaggagaagtgctcctgccaccgtcaccgcctcc
acagcatctttcactttttatctagcgaacacatttcctgagctcggttcagccaaaggc
accgatgacaatgtcattagctttgtgtctctcgacaactcagagatcccattctctggg
agcggatacaaggatcccactggcaccttgactgtgtctaatgtcacatccgaaggattt
gatcttgcgtgggagtcaaataaacacattggctatgatagttacactgtagaacttaaa
gatttctcagggaaatggaaggaggaggttcatctccatggggaggtgaatgacactaaa
atccgtggcctaaaggcttccactgagtaccaagtaaggctatatggaatatccaataac
caaagatcttcactactagaagcagttgcagttacagcaccaaagtctacctctcctgat
gttgttgctttgaccttcacaagtgtttcaacaacgctaccaagcctccataaggaggtt
cagccatcagtctctacctccactcttttaacagaggattttaaagctgaagcctcaggt
gatgaactcgaggacccgaatcaagggcctccgggtgacctaaacgtcaccgatgtgagc
aggaatagtttgaggctgtcttggtcagctcctgatggagtcttcgatagcttcatcgtt
gagttgaactcaacatcaaataagtccaaagacagtgttattgaagtgtctggagaagcc
aggcaggtccatgtagatggattgaaccctgacacgctttatgagattacattgtgtggg
atgaaggagggcgagaaatcccaaccagtcaatgttcacatcaagacagaggagcagagg
ccgcagattggcagtctgagtgtgtctgatgtgtcttgggatagcttcaatgtgtcctgg
accattgaggatgactctgcctttgacagttttgtgattgaagtggcaaatgcagcaggt
ccagaaagacaggacctttcggtatctggtgatgcacgtagtttatggatgtctgggctc
agtcccgacacgtcctatataattacgctgtacggagtgcatcagggctcgatcctggga
tcgatctacactcaagcagctacagatagtgctccagtggttggcaatctgtatgtttct
aatattacatcagagagcttctccatttcatggaatgacacgagaggagatattgagagg
tttatcctggagattatagactctagctggcagcgggagccagtcgaatataatctgtca
caaagcacacagtcgtatgaaatcactgggctgcggccgactactgactatatagcttac
ctcactggagtcgtgaagagaaggagaacagactccgtcagtgctgtcgcctccacagcg
gccgagcctgacttgtctgggctagttgtttcaaacattacctcagacacagtgtcgctc
tcctggcggatgggagagaaggcgtttgataattttatagtcgaggtgagagagtctgct
ttgcccacgcaggcgacggggcgcaccttacccggaggtgttcgctccacggtgctgacc
ggcctcagaggagacacgcggtatcagatcaagctgtacgccacctttggtggcacaaac
acagctgccctgacgactgtagtaaccacagagccgaagcctaaattgggccccattgtg
gtttctgaaacacggccgaatagcttgacgctgtcctggagcacactgtcaggccacttc
gatggctttgctgctcgtgtcactgaccgtgagcagctctatgatgttgtagagctcagg
ctgtcaggtgcagagaggaaccttactgtaacgggtcttatggactctacggtttatgat
atagggttttatggtctgtctcatggccgtcaaactccagcagtttccttcaataccagt
acagcgtcattacctagagtggaaaatctcacggtttcggatattaccccgtacggattt
cgggtgtcctgggcggcagactcctctgaaggcttcaggcattttcaggtaaaggtgtcg
gactctggccagctgctggagccgcaagagttcgtagtgccggggaaccagaccgtactg
gatgttttgggcctgatcactggcattggctatgaggtcagtgtgaccggggtgtcaggg
aatgggttacagtctcgtccaatcaccacagtggctgttacagaggcagagccagagatc
gagcaccttttcgtgtcggacgtcacccctgagagtttccggctggcctggacggcagaa
gacgacatctttgatcgattcgttctcaaagttagagattcgagaaagctctcccaccct
cgagagttcgttgtgccgggcgatgacagaaccaaagttttaacgcagcttttgggggga
accgagtatgaaattgagctttacggtgtcacgctggaacatcgctcccaacccattact
gctgttgccagaacaggccttggagctctacgggaccttcgtttctccgatatcacggac
acaacagctgtggcttcctggactgtaccgcgatcccagccggactcctacagaatcact
tacatcccagtccaaggaggtactcccgtgatcctgacagcggacgggtcacagtctcag
gtttcgctgacaaagctgattcctggagaggcgtatcagatgtcggttgttgcagtgaaa
ggtctggaggagagcgaaccagtgtccgacacttttacgacagccctggatacgccacgc
agcctgactgctgtcaatgtcactgacacaaaggcgctgttgctgtggcaacctgccgtg
gcgaccgtggatggatatgtgatcacatacagtgcagacactgtgccaccgatatcagag
caggtttctggaaacacggtggagtttgagatgagctccctggctccagcaactcaatac
actgtcaatgtttacgccatcagaaaccgagagaaaagcgctccggcgaccacagacttc
accacagatgtggacgctccgcgggatctggttgccagtaatattcagacagacagcgcc
gttctcacctggacgccgccgcgggccgccatcaccggatatatcctgacctttcaagcg
tctgacggcgatgtcagggagctgaatctagagccgtctgcgacctcacacagtctgtct
gatctgagcagcagcactgaacacacagtcagactgcaggccgtcgctgaggacaagagg
agcacacagatcagcagcgtcttcagcacagttggcatgcgctacaggaacggcaaggac
tgctcagaagctctgctgaacggagagacgtcctccgggccgtacaccatttacatcagc
ggagacgagaagcagccggtccgggtttactgtgacatgagcactgacggcggtggctgg
atggtgttcctacggcgtcagagcggcaaggtggatttctacaggaactggaggaactac
tctgcaggattcggtgacacgaacgatgagttctggctcggactttcaaatcttcacaaa
atcacctcagccggtcagtatgagttgcgcgtggacctgcgtgatggacaggagagtgtg
tttgctgtctacgataaattttacatcgcagatcctcgttcccgctacaagatccagatt
ggtgcatacagtggtaccgcaggtgattccttgtcgtatcaccagaacaggcccttctcc
acctataacaatgacaatgacattgccgtcaccaactgtgccctgtcctacaagggagcg
ttctggtataaaaactgccatcgagtgaacctgatggggaaatatggagacagcagtcac
agcaaaggcatcaattggttccactggaaaggccacgagcattcgattccattcacggag
atgaagatccggccagtcaacttcagaaacttggaaggcagacggaaaagatcatag
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integrated database retrieval system
