Sinocyclocheilus rhinocerous: 107725153
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Entry
107725153 CDS
T04916
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107725153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
srx04990
]
107725153
Domain-containing proteins not elsewhere classified [BR:
srx04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107725153
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107725153
NCBI-ProteinID:
XP_016389804
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MSGKYSVVLQGPAPWGFRLHGGKDFNMPLSISRLSDGGKAAKAGVAVGDLVLSIDGISTD
GMNHLEAQNKIKSSTDKLNLSLQKASSLLKPYVAPKDDSVEIIKPVPMTTSIPSSSDITN
STHITSSSNRSARPFGGAGSPHITSIPSAVSAFAPASSAQNPNPQAPPTPTDGSPNHLPA
VPRPSVYNTPINLYSNENACEVAMGQRRGLLESQGESSQLNGLPRKHITETDIEFYHVPT
HGDASRKRIMEDTEDWRPRSGTSQSRSFRILAQITGTESEFDPSQEAESAKKTTNEELDD
SQPSAHVTCPVKTMIKALGTPVRSTAGLITPTFGVMSNSTPLGPALDRPMPRPHPKDEAS
LVQMAEHIPAGTRTPVCAHCDMIIRGPFLMAMGKSWHPEEFTCAHCSVSLSELGFVEEQG
SVYCQHCYEEFFAPACARCQYKILGEVINALKQTWHVYCFLCASCQQPIRNDTFHLEDGE
PYCERDYYSQFGTGCRGCDFPIEAGDKFLEALGGTWHDTCFVCSVCSVSLEGQTFFSKKD
KPLCKKHAHTLKI
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaaatacagtgtcgtgttacagggtccggccccatggggcttccgactgcac
ggggggaaagacttcaacatgcctctctccatttcacggctgtcggacggaggaaaggct
gctaaagcaggagtggctgtgggagatctggtcctgtccatcgacggcatcagcactgac
ggcatgaaccacctcgaggctcagaataagatcaaatccagcacagacaaactcaacctc
tccttacagaaagcttccagccttctgaaaccatatgtggcaccaaaggatgattctgtg
gaaatcatcaaacccgttcccatgacaacctccattccatcttcttctgacatcacaaac
tccacccacatcacttcatcctccaataggagcgctcgcccgtttggaggggcagggtca
ccacacataacctctattccgtccgccgtgtctgcttttgcacccgcctcctcagctcaa
aaccctaatccacaggctccgcccactcctactgatggttcacccaatcatctaccggcg
gtgccccgcccttcagtgtataacacacccatcaatctctactccaatgagaatgcctgt
gaggttgccatgggccagaggcggggcctgctggaaagccagggtgaaagctctcagctg
aatggacttcctcgtaaacatatcacagagacagacattgagttttaccacgtcccgact
cacggtgatgccagcaggaaacgcatcatggaggacacagaggactggcgcccacggtca
ggaacttcacaatcccgctcgttccgtatcctggctcaaatcaccggcactgaatctgaa
ttcgatccctcgcaggaggctgaatcagcgaagaagacaacaaatgaggagctggatgat
tctcagcccagcgctcatgtcacctgtcctgtaaagaccatgatcaaagccctgggaaca
cctgtcagaagcacagcaggtctaatcactcccacttttggcgtcatgagcaacagtact
cctttaggccccgccttggaccgacccatgccccgcccacaccccaaagacgaagcctca
ttggtccagatggcagaacacatccctgctggaacacgcactcctgtgtgcgctcactgc
gacatgatcatcagggggccgttcctgatggcaatggggaaatcgtggcacccggaggag
ttcacgtgcgctcactgcagtgtgtctctgagcgagctgggttttgtggaggaacagggc
tctgtttactgccagcactgctatgaggagttcttcgctccggcctgcgcacgctgccag
tacaaaatcctgggggaagtgatcaatgcactcaagcaaacctggcatgtgtattgtttc
ctgtgtgcatcctgtcagcaaccgataagaaacgatacttttcatcttgaggatggagag
ccgtactgcgagagagattactacagtcagtttgggacgggctgccgtggttgtgatttc
ccgatagaagcaggagacaagtttctggaggccctgggcggcacctggcacgacacctgc
ttcgtgtgctcagtgtgcagcgtcagtctggagggtcagaccttcttctccaaaaaggac
aaaccgctttgcaagaaacacgctcacactctcaaaatataa
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