Sinocyclocheilus rhinocerous: 107725180
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Entry
107725180 CDS
T04916
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107725180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
srx04990
]
107725180
Domain-containing proteins not elsewhere classified [BR:
srx04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107725180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Dynamitin
Motif
Other DBs
NCBI-GeneID:
107725180
NCBI-ProteinID:
XP_016389839
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MSGKYSVVLQGPAPWGFRLHGGKDFNMPLSISRLTDGGKAAKAGVAVGDLVLSIDGINTD
GMNHLEAQNKIKSSTDKLNLSLQKASSLPKPDVAPKDDSVEIIKPVPMTTSIPSSSDITN
STHISSSSNRSARPFGGAGSPHIASIPSAASAFAPASSAQNPNPQAPPTPTDGSPNHLPA
VPRPSVYNTPINLYSNENACEVAMGQRRGLLESQGESSQLNGGPPAVSTKPAMNRFPRKP
ITETDIDFYHVPTHGDASRKRIMEDTEDWCPRTGTSQSRSFRILAQITGTESELDHSQEA
ESAKNKTNEEQDDSQPSAHVCPVKTMIKAPGTPVRNTAGLVTPTFGVMSNSTPLGPALDR
PMPRPHPKDEASLVQMAEHIPAGTRTPVCAHCDLIIRGPFLMAMGKSWHPEEFTCAHCSV
SLSELGFVEEQGSIYCQHCYEEFFAPTCARCQYKILGEVINALKQTWHVYCFLCASCQQP
IRNNTFHLEDGEPYCERDFYSLFGTGCRGCDFPIEAGDKFLEALGGTWHDTCFVCAVCSV
SLDGQTFFSKKDKPLCKKHAHGLKI
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaaatacagtgtggtgttacagggtccggccccatggggcttccgactgcac
ggggggaaagacttcaacatgcctctctccatttcacggctaacggatggaggaaaggct
gctaaagcgggagtggctgtgggagatctggtcctgtccatcgacggcatcaacactgac
ggcatgaaccacctcgaggctcagaataagatcaaatccagcacagacaaactcaacctc
tccttacagaaagcttccagtcttccaaaaccagatgtggcaccaaaggatgattctgtg
gaaatcatcaaacccgttcccatgacaacctccattccatcttcctctgacatcacaaac
tccacccacatctcgtcatcctccaataggagcgcccgtccgtttggaggggcggggtca
ccacacatagcctccattccctctgccgcatctgcttttgcacctgcctcctcagctcaa
aaccctaatccacaggctccgcccactccgactgatggctcacccaatcatctaccagcg
gtgccccgcccttcagtgtataacacgcccatcaatctctactccaatgagaatgcctgc
gaggttgccatgggccagaggcggggcctgctggaaagccagggtgaaagctctcagctg
aatggtggtcctccagctgtttctacaaaacctgcaatgaacagatttcctcgtaaacct
atcacagagaccgatattgacttttaccacgtcccgactcacggtgatgccagcaggaaa
cgcatcatggaggacacagaggactggtgcccgcggacaggaacttcacaatcccgctcc
ttccgtatcctggcccaaatcactggcactgaatctgaattagatcactcacaggaggct
gaatcagcaaagaataaaacaaatgaggagcaggatgattctcagcccagcgctcatgtc
tgtcccgttaagaccatgatcaaagccccgggaacgcctgtcagaaacacagcaggtctc
gtcactcccacttttggtgtcatgagcaacagtactcctttaggccccgccttggaccgt
cccatgccacgcccacaccctaaagacgaagcctcattggtccagatggcagaacacatc
cctgctggaacacgcactcctgtgtgcgctcattgcgacttgattatcagggggccgttc
ctgatggcgatggggaaatcgtggcacccggaggagttcacgtgcgctcactgcagtgtg
tctctgagcgagctgggttttgtggaggaacagggctccatttactgccagcactgctat
gaggagttctttgctccgacctgcgcgcgctgccagtataaaatcctgggggaagtgatc
aatgcactcaagcagacctggcatgtgtattgtttcctgtgtgcatcctgccagcaaccg
ataagaaacaatacttttcacctcgaggatggagagccgtactgcgagagggatttctac
agtctgtttgggactggctgccgtggttgtgatttcccgatagaagcaggagacaagttt
ctggaggccctgggtggcacctggcatgacacctgcttcgtgtgcgcagtgtgcagcgtc
agtctggatggtcagaccttcttctccaaaaaggacaaaccgctttgcaagaaacacgct
cacggtctcaaaatataa
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