Sinocyclocheilus rhinocerous: 107725336
Help
Entry
107725336 CDS
T04916
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04020
Calcium signaling pathway
srx04080
Neuroactive ligand-receptor interaction
srx04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107725336
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107725336
04082 Neuroactive ligand signaling
107725336
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107725336
Ion channels [BR:
srx04040
]
Ligand-gated channels
Glutamate (ionotropic)
107725336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
107725336
NCBI-ProteinID:
XP_016390060
LinkDB
All DBs
Position
Unknown
AA seq
1587 aa
AA seq
DB search
MKTHEVFRSSIMSVCIYRGLAPPSQARWAWLHVLAPTPRHWPCPSLQQLLAVCLLLLLPP
LAVQSRREWGGGGMAHYIPSSVAQYPPVSKLVQGLSIAVVLVGNSSEVALAGMRDKDDFG
HMPLAPNVEMLTMNETDPKSIIKSICDLMTEHWLQGVVFGDDTDQEAIAQILDFISTQTH
IPILGVKGGSSMIMAAKDDNSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQ
DFVTKIRSTIENSFVGWELEEVLLLDMSVDDGDAKIQNQLKKLQSPVILLYSTKEEANII
LEVAHSVGLTGYGYTWIAPSLVAGDADHIPAEFPTGMISVSYDEWDYGLEARVRDGVAVI
ASATSTMMIDRGPHTLLKSECHGALDKKSPISNEVLRYLMNVTFEGRNLSFSEDGYQMHP
KLVIILLNKDRQWDRVGKWENGSLSMKFHVWPRFELYSGTESREDDHLSIVTLEEAPFVM
VEEVDPLSGTCMRNTVPCRKQLKSLNQTGDSGIYIKRCCKGFCIDILKKIAKSVKFTYDL
YLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMV
SRSNGTVSPSAFLEPFSADVWIMMFVMLLLVCAIAVFIFEYFSPVGYNRRLIDGREAGGP
SFTVGKAIWLLWGLVFNNSVPVQNPRGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE
YVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYREMHSYMVKFHQRNVNEAL
YSLKSGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKESGWKRQVDL
AILQLFGDGDMEEFEALWLTGICHHEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFIA
EHVFYWHLRFCFMGVCSGKPGLTFTLSREIYSCIHGVEIEDKSSALNSPSATMNNTHSNI
LRLLRTAKNMASLSGVNGSPHSALDFIRRESSVYDTSEHRRSLAGHSDCKAPYLPDDNMF
SDYISEVERTFGNLHLKDSNLYQDHYLHHHGGSTLGLTGPNRPHSLGSSSSLEGGMFDCD
SLGGGAAPVFTTQPRSALTHRNMSKFDLLQSQTPPSGLGLKQGLADLYGKFSFKGGASSS
GYIAGHDRFCGGADDGNIRSDVSDISTHTVTYGNLEGNAKKRKQYRDSLKKRPASAKSRR
ELDEIELGYRRRQHHHHHHGHRSASPPSERKRGVSSTSYLLQDKESLRDFYLDQFRPKKG
IPQWEHVDLTDGPGGGGGAGGNCTSLLSVDDFLKSKPKKPESGDRECRSCRASSAGSKHG
AGVLHVGSGCVASGAAGRVGSSRPSSATCMRCEACKKSGNLYDISEDSNHLLEQLGGSRG
QTPAQRRRAFSGKPLRRQHSYDAFVDLQREELTGMGALPMLCAAPPPRSISLKERERCMD
ASFAHIFECPEQDTERDPLFYERGAGSPFGLQNAPHRRSVGERDLRDRGLLEGPVHALSK
SLYPDRTDHNPFIPTFGDDQCLLHGAKSYYVTQQQSQHGDLLSPMAFPAELCMGNHHTSK
LSLSPPRPFTGSNGHVYEKLSSIESDV
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacacgaggtttttcgctcctccatcatgtccgtctgcatttaccgtggctta
gctccaccctctcaggcaaggtgggcgtggcttcatgtgttggctccgaccccgcgtcac
tggccctgcccatcgctgcagcagctgttggctgtgtgtctgctgctgctgctgccgccg
ctggccgtccaatcacggcgcgagtggggcggagggggcatggcccactacatcccatca
tcggtggcacagtatccgcccgtctccaagctggtgcagggcctgagcatcgcggtggtg
ctggtgggaaactccagtgaggtggcgctcgccggcatgcgcgacaaagacgactttggc
cacatgccactggcgcccaacgtggagatgctcaccatgaacgagacggaccccaagagc
atcatcaagagcatctgcgacctgatgacggagcactggctgcagggcgtggtgttcgga
gacgacaccgatcaggaagccatcgcgcagatcctggacttcatctccacgcagacgcac
atccccatcctgggcgtgaagggaggctcctccatgatcatggccgctaaggacgataac
tccatgttctttcagttcggaccctccatcgagcagcaggcgtctgtcatgctcaacatc
atggaggagtatgactggtacatcttctccatcgtcaccacatactaccccggctaccag
gactttgttaccaagatccgcagcaccatcgagaacagttttgtgggctgggagctggag
gaggtgctgctgctggacatgtctgtggacgacggagacgccaagatccagaaccagctg
aagaagctgcagagccccgtcatcctgctctactccaccaaagaggaggccaacatcatc
ttggaggtggcgcactcggtgggcctgacgggctacggctacacctggatcgccccgtct
ctggtggcgggagacgccgatcacatcccggccgagtttcccacaggcatgatctcggtg
tcatacgacgagtgggattacggtctggaggcgcgtgttcgtgatggtgtggctgtgatc
gcctcggccacctccaccatgatgatagaccgagggccacacacactgctcaagtctgag
tgccacggggccctggacaagaagagccccatcagcaacgaggtgctcaggtatctgatg
aacgtgacgtttgagggccggaatctctccttcagtgaggacggctatcagatgcacccc
aaactggtgatcatcctgctgaacaaggacagacagtgggacagagtgggtaagtgggag
aacggctctctgtcgatgaagtttcacgtgtggccgcggttcgagctgtactctgggacg
gagagccgtgaagacgatcatctgtccatcgtgacgctggaggaggctccgttcgtgatg
gtggaggaagtggatccactgagtggcacctgcatgaggaacacggttccctgccgcaag
cagctcaaatcactgaatcagacgggggattctggcatctacatcaagcgctgctgtaaa
ggcttctgtatcgacatcctgaagaagatcgccaagtctgtgaaattcacctacgacctt
tatctggtcaccaacggcaaacacggcaagaagatcaacggcacgtggaacgggatggtg
ggagaggtggtgctgaagaacgctcacatggccgtcggctcgctgaccatcaatgaggag
aggtcagaggtcattgatttctccgtgcccttcatagagacgggcatcagtgtcatggtg
tctcggagcaacggcaccgtgtctccgtctgcattcctcgagccgttcagcgcagacgtc
tggatcatgatgttcgtcatgctgctgctggtttgtgccatcgccgtgttcatcttcgaa
tacttcagtcccgtgggctacaatcgccgtctcatcgatggcagagaggccggaggtccg
tcgttcaccgtcggaaaggccatctggctgctctggggtttggtcttcaataactccgtg
ccagtgcagaaccccagaggaaccaccagcaagatcatggtgtccgtctgggccttcttt
gctgtgattttcttggccagctatactgctaacctggccgcgtttatgatccaggaagag
tacgtggaccaggtgtcgggcctcagcgacaaaaagtttcagagacccaacgacttctcc
ccgccgtttcgcttcgggacggtgcccaacggcagcaccgagagaaacatccgcaataac
tacagagagatgcactcctacatggtcaaattccaccagcgcaacgtgaatgaagcgctg
tacagtctgaaatcagggaagctggatgccttcatctacgacgcggcggtgctgaactac
atggcgggcagagatgagggctgtaagctggtcaccatcggctctgggaaagtgttcgct
tccaccggctatggcatcgccatccagaaagagtcgggctggaaaagacaggtggacctc
gccatcctgcagctctttggagacggtgatatggaggagtttgaggcgctctggctcacc
gggatctgccaccacgagaagaatgaagtgatgagcagtcagctggatgtggacaatatg
gcgggtgtgttctacatgctgggtgctgccatggctctgtctctcatcaccttcatcgct
gagcacgtcttctactggcacctgcgcttctgcttcatgggcgtgtgttctgggaaacca
gggctcaccttcaccctcagcagggagatttacagctgcattcacggagtagaaatcgaa
gataagagttcagcgctcaattcgccctcggctaccatgaacaacacgcactcgaatatc
ctgcgtctgctgcgcaccgccaagaacatggcatccctctccggggtcaacggctccccg
cacagcgcgctggacttcatccgccgagagtcctccgtgtatgacaccagcgagcaccgc
cgcagcctggccggacactcggactgcaaggccccctacctgcccgacgacaacatgttc
agcgactacatcagcgaggtggagcgcaccttcggcaacctgcacctgaaggacagcaac
ctgtaccaggaccactacttgcaccaccacgggggctccacgctggggctgacgggcccc
aaccggccccacagcctgggctccagcagttctctggagggcggcatgtttgactgcgac
agccttggcggcggcgcagcccccgtcttcaccacacagccacgctctgcactaacgcac
aggaacatgagtaaattcgatctgctgcagagccagactcctccgtctgggctgggattg
aagcagggactggccgacctgtacgggaagttctcctttaaaggtggagcttccagttcg
ggatacatcgcagggcacgaccggttctgcggcggagccgacgacggaaacatccgctct
gacgtgtctgacatttccactcataccgtcacctacggcaatctggagggcaatgctaag
aaacgcaagcagtatagagacagcttgaagaagcgtccggcgtcggcaaagtcccgcagg
gaactcgacgagattgagctgggttaccgccgccgccagcatcaccaccaccaccacggg
caccgctcggcttcgcctccatccgagcgcaaacgaggtgtgagctcgacctcatatctg
ctacaggacaaggaaagcttgagggatttctacctggatcagttccggccaaagaaaggc
atcccacagtgggagcatgtggatctcaccgatggccccggcggtggcggcggagcagga
ggcaactgcaccagtttgctgtctgtagatgacttcctaaagagcaaacccaagaaaccg
gagagcggcgaccgggaatgtcgcagctgtcgggccagcagcgcaggcagcaaacacgga
gctggagttctgcacgtcggaagcggctgcgtggcatcgggagccgcaggaagagtcgga
agcagccgtcccagttctgccacttgcatgcgttgcgaagcctgcaagaagtccggaaac
ctgtacgacatcagcgaggacagtaaccacctgctggagcaactgggaggcagtagaggc
cagacgccggcgcagcgccgcagggctttcagcgggaagccgctacgccggcaacactcc
tacgacgcattcgtagacctgcagagagaagagttaactgggatgggcgcactgcctatg
ttatgtgcagcaccgccgccgcgcagcatcagcctcaaggagcgggagcgctgcatggac
gcctccttcgcacacatattcgagtgtcccgagcaggacacggagcgagacccgctgttc
tacgagaggggcgcaggatcgccgtttgggttgcagaacgcgccccatcggcgctcggtg
ggagagagggatttgagagacagaggactcctggaggggcctgttcacgctttatctaaa
tccctctatcccgaccgaaccgaccacaacccattcatccctacgttcggagacgaccag
tgtctgctgcacggtgccaagtcctactacgtcacccagcagcagtcgcagcacggggat
ttgctcagccccatggccttccctgcggagctgtgcatggggaaccaccacaccagcaag
ctcagcctcagcccgcctcggccgttcaccggcagcaacggacacgtgtacgagaagctc
tctagcatagagtctgacgtgtga
DBGET
integrated database retrieval system
