Sinocyclocheilus rhinocerous: 107725536
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Entry
107725536 CDS
T04916
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107725536
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107725536
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107725536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
107725536
NCBI-ProteinID:
XP_016390298
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGREFSKSAHEGAVEAMRKDPIVVQVLRRGPSARNQ
SSLQEVCVVDVCTQTDITFEHIMALAKMRPTTPPVPDICPFLLSDSCHSIQTMEHEYFDC
PEYVASTQAEVDRAVEFECEEIELCRMNSQEKLGLTLCYRTDDEEDTGIFVGQVELNSIA
ARDGRIREGDRILQINGHDVQNREEAVALLSNETSRSIVLLVTRPDGQMDGSWLDEDHQD
FLEELKMEILEEQKKEGILQTAGCVKRSKRHEDASASTDTATCSSTILEKDSGVKCSFEE
SSEHELISHPQTWTQKQLWDRWEADSHLVPMDTVRLTRQEKGQEEGKLSENGVECDHFQQ
LLELKCQIRNSGECGLVYRRSSTIECSLTEQGGSRVARELHMLNEELRSIERECQSIMQA
HQLRRSKHDSPRTDKESRLHRGKLADINEHPERLQSEKLRDKDSSSAYNTAESSRSTPLG
TEGSPDHSLQRRVHLTNQRNLRSTQHLQSPYNSPILSLPSQSSPTCSRAHMYTSSTPPLQ
TPITSPGSQGPSQAFSSSLEQSPSNPSESDPALPADDERCEKERNRNRVATAWHYQSPYH
SNTTTTQPPSTRHYQSYLQLLQQHSSSSLECSQSQLSLLSLRGRPGPSPPGRLEWKVKVR
ADGTRYVARRAARDRILRERALRIREERSGGMTTDDDAVSELKMGRYWSKEERKQQLARA
REQRRRREFMQRSRLECLRETMGTASGEVSILELSHKKMLKKRNKKILDNWMTIQELMSH
GARAPEGTKVHNAFLSVTTV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtaacctgtgcacgctgcagaagagagaggagcactacaagctgctgtatgag
atcgcacaggtgaatgggcgtgaattttccaaatctgcacatgagggagcggtggaggcc
atgcggaaggatcccatcgtggtgcaggtgttgaggcgggggccctcggcccggaaccag
agcagtctacaggaagtgtgtgtggtggatgtgtgcactcagacggacatcacctttgag
cacatcatggctctggctaagatgagacccaccactccacctgtgccagacatctgcccc
ttcctgctgtcggacagttgtcattccattcagactatggagcatgaatattttgattgt
ccggaatatgtggccagcactcaggcagaggtggacagggcagttgaattcgagtgtgag
gagattgaactctgtcgaatgaacagccaggagaagctgggtcttactctctgttaccgc
actgatgatgaggaagatacaggcatttttgttggtcaggtcgagctcaacagcatagct
gcgagggatggacgcatcagagagggagacagaattttacagataaatggtcatgacgtg
cagaacagggaagaggctgtcgctctcctctcaaatgaaacttccagatccatagtttta
ctcgtcaccagacctgatggacagatggatggaagctggcttgatgaagaccatcaagat
ttcctagaggagctgaagatggagattttagaagaacagaaaaaggagggaattcttcaa
acagctggttgtgtaaagcggtctaaaagacatgaggatgcctcagcaagtacagataca
gcaacatgttcctctaccattctggagaaggacagtggcgtgaaatgcagctttgaggag
agctctgaacatgaattgatctctcatccccaaacatggactcaaaaacaactttgggac
aggtgggaagcggactcgcatttggttcctatggacaccgtaagattgaccaggcaggag
aagggtcaagaggagggcaagttgagcgagaatggagtggagtgtgaccatttccagcaa
ctcctggagctcaagtgccagatccgtaatagtggagaatgcgggttggtctacaggcga
agcagtactattgagtgcagcctgacggagcagggtggaagcagagtggcacgggagctg
cacatgctcaacgaagagctgcgcagcattgaacgtgagtgccagagcatcatgcaagcc
caccagctgcgcaggagcaagcacgactcgcctcgaacggataaggaaagtcgactgcat
cgtggcaagcttgcggatatcaacgagcatcctgagagactacaaagtgaaaagctcaga
gataaagacagctctagtgcctacaatacagctgaaagttcccgctcgactcccctggga
acagaaggttcaccagatcactctctacagcgtcgagtccacctgaccaatcagaggaac
cttcggagtacccaacacttgcagagtccctacaatagtcccatcttgtctttacccagc
caaagtagccctacttgcagtcgtgcccatatgtacaccagctccacaccacccttacag
acccccatcaccagtcctggttcacaaggacccagtcaggccttctccagcagcttggag
caaagccccagcaacccttcggaatcagacccagcgcttccagctgatgatgagcgctgt
gagaaagaaagaaaccggaatagggttgcaaccgcttggcactaccaatcaccctaccac
agcaacaccacaacaacccagcctcccagcacacgacactaccagagttacctacagctc
ctacaacaacattcctcttcctctctggagtgctcccagagccagcttagcctcctcagc
ctccgtggacggcctggaccctcgccacctggccgacttgaatggaaggtcaaagtacga
gcagacggaaccaggtatgtggcacgtcgggccgcacgggaccgtatcctgcgcgaacga
gccttacggatccgggaggaacgcagcggtgggatgactacagatgacgacgcagtcagc
gagttgaagatgggccggtactggagtaaagaagaacgcaagcagcagctagcacgggcc
agggaacagaggcgcaggagggaattcatgcagaggagccggcttgagtgcctcagggag
accatggggacggcaagtggagaggtcagcatcctggagctcagccataagaagatgctg
aagaaacgaaacaagaagatccttgacaactggatgaccattcaagagctcatgagccat
ggagcacgagcacccgagggcaccaaagttcacaacgccttcctgtcagtcaccacagtt
tag
DBGET
integrated database retrieval system
