Sinocyclocheilus rhinocerous: 107725898
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Entry
107725898 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107725898
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107725898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
DUF4058
Motif
Other DBs
NCBI-GeneID:
107725898
NCBI-ProteinID:
XP_016390802
LinkDB
All DBs
Position
Unknown
AA seq
2707 aa
AA seq
DB search
MKLKGKPPSHKSENTYRFVTFSERLAKVNIDVIHRIDRTGSYAEEVETYFYEALLKWKDL
NLTEHFKKFFQEVSSKSQSFNMLVFHQNAMVESLKTHLSVKNSMAFQPLLDLVFQLARDL
QMDFYPYFCDFFVIITSILETQDTEVLEWTFTCLSYLYKYLWRMMVKDMDTIYSLYSKLL
AHKKEHIRNFAAESFSFLMRKVSDYDALFTLMFSDLSESPQKARGAGQLIFEMCQGVCNM
FQSCATKALPVVLQKLGPAAGQDVDLPWDSVKEALDHMAESSANYVDKEYLLVLWDSLQV
SLKEVLGKLDTSNAVQANEHLERILYICHTLVEHRKGAKITKPQSVCETLLQLVQAPGLS
YSCHRLLLQVVSALLMGENLSLPASSIHELLKKVFNSSMDRDLMLSFTKEMFDMKQFEQL
FLPSLLQYLEQLFCMEDSVNRQLALELLVGLILSKAPPPTDGSMAFEKYPLIFTGQTVRS
TGPERDQTVSVPQQILSVIDFPADQPLSDLSHPWAALVLLPHVRPLEASSVIPAITALLN
RLLQEVCSKILGRGQSRGLFVARQALSTLLSFKETAAVQSLLPAELVRNIIEKFPTDLSA
LLLGDLYYTRLALNGCSAQLSHDSLLELYQILYSNFSSNISKIRLLTLRIMSNFEADLPK
PAEGEESSNAQTVFAVCLQAEQVPATVQDYREKLLHLRKLRHDLAQPCLPKGPFHEVPLR
YLIAMLFVNFRPLWDAVIDMLVTHAKEMDNKSFWKVYYENLEMVAGLAEEELQADDEDGG
SEQYQAAKQLRVPGTSVIESGDVGVLFLEQLDHVLNPSERTDFTNFCSLLWRAMAAEIPE
CTNCLRKDNLERLLDDKHFKDEIVHFNISEEGAVVLPSHRPQLIPMLMRILYGRMCPRVG
NRFQGKANTASRSSIVLRFLAGCQPEELGMFIDLLLEPVCHHAEGACLAAVERAVAKTNS
FFYLKPGCINPLKNLRRLGILRIQDFFDDFESYSFTADELDAVFQAVVWPKPRRTAFFML
IHKMGHLIHIYLPKVLQILLCITASVSFILDHREQLKPGCINPLKNLRRLGILRIQDFFD
DFESYSFTADELDAVFQAVVWPKVCLLSTESPYSPPPLLKVIRVWSQNPRYFPLLAKQRP
GHPDCDVLLNVFALLSSKNVSAITTAMVMDIAESLLTTPDYEPKENESDLIVNDCVIPEP
DQSCNVSDSLTIGCHLLLPHIPALLQYLSGVVRNSERLKKKKFRAQVSKELNILSKISRF
VTEKEQSSTLIGLLLPYLHKPKTAQETELDILGTLKNLLRQCSEPSMFLKPLSKLLSIIH
NRLSRQALCEAFLTLSDMDGELKYITDVVIQLNAFDSRHLDEIHFDMRLVAFQKVTKHVK
EMSSLDMRYLTAIMHNCFHSLEIGDMSLADSATMCLSAVITQLSEVGCPEAEYKEIVQYT
ILDAIRKGLKSKTESVRNDYTTVLACLVNTFPNRSEFHDLVQLTDYNDPESDFFEHMKHI
QVYRRGRALRKFARQLTEGKIVMSSRSMQNYVMPYAMIALVDEKLLKYEPMTTAAVEVIG
AVCRRLTWSKYLFYLKHFVHVLQTGIAEQKLAVSLLLTVLDAFHFDHETLSKEIEAAKNK
KTDEPSVVVEEAEDEAAETMDTDESDAEDAMETDEAGAAVSTATDAETEGPAKPKESKES
QMKKVSPVVSSGLPQSERDLEALISSIHHTVTQSVLPKLHKCLTAKVKRDDEHKMVKSKE
VKDEEVVRVPIAFAMVQLMKSLPKEVMEANLPGIFLKVCVHLRSRFQEIRDVARNTLVKI
IETLGHQYLHYLLSEMQAVLVKGYQVHVLTFTVYHLLSVLKPSLTGGDLDPCMDMLIAIF
NNELFGAVAEEKDIKGIVSKVMEARHSKSSDSYELLGQFCGQERVIHLILPLKEILENTA
SLKVSRRVHAVLRRIVAGLLLNQSMSPQSILLLSHGLVSESLPLITSKNREAPPDPRLPP
PSCLLLPATPKRGGAKAAISSRTNMHILVETGLSLLHCCLKSSKINSSVPSVKEMLDPFV
SLLLDCLNSMHVKVITEALQAFIWILKFPLPAVEQNYDQLTKQLFVLLKDYAKAGAGRGE
NFHLVQNCFKAISVLVKSMRKPVTETQLQVLLGYAEEDIYDRLRQATAFGLLRAILSRKL
VVPEMEDVMKKVAKFAIDGSNEQVRMRCRQIYLKYLMDYPLGKKLRKHFDFIVAQLTYEY
DTGRQSALELMAFIFQKFPQALLHEYCGLFFVPLSLAMLNDDSATCKKMTALAXTSLLSQ
LDLQHQNSMFNLVNTWLTGEKVVLRRLGAQVCGLFVEFEGEKFNRRLDVLIPLIEKEIHA
SNFEDIEEEEDEKAADRLLFCYLTLVVKLIKECSFLELHKPADLLNSIWSHIDSHLRYPH
CWNWLTASQIFGLLFAARKPEELLALWSSQENMSKTPQPMAPAFLIDNLSQKMRELVLSF
CYQLQSKFLDISAGEQVVKNLLYVAKVIYLISPESDTTNPAEEQEGEEKETTDNMEENEG
EEDKKQELEEQQNENRPPSLLWVMKKLSLLAKREAADTPKVPLKRTCVFKFLGAIAVDLG
KDRLGPYLTXIIAPLYRELDSTYADQGQPHTKNLAQELIELLKKLVGLERFSLAFAAVQK
EAAQRRASRKKAKAIQAVVNPDIAARKKVKKQLKKNEAKKQKIAFVRTGHKAKKHKSTSL
KDLAIIS
NT seq
8124 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaaggcaagcccccgtctcataaatcagaaaacacttaccgctttgtcacg
ttttctgagaggctcgcaaaagtaaacattgatgtcattcatcgcattgacaggactgga
agttatgcagaggaggtagaaacctatttttatgaagcactattaaaatggaaagacttg
aatttgacagaacacttcaagaagttttttcaagaggtgtcaagcaagagtcagtcattc
aacatgctggtgtttcaccaaaacgctatggtggagagtttgaagacccacctgtcagtg
aagaacagcatggctttccagcctcttctagatcttgtatttcagctggctcgtgatctc
cagatggacttttacccttacttctgcgacttcttcgtcatcatcacgtctatactggaa
acacaagacactgaggtgttggaatggaccttcacatgtctgtcatacctgtacaaatac
ctgtggaggatgatggtgaaggatatggacacgatatacagtctttacagtaaacttctg
gcgcacaaaaaggaacacatccgcaactttgctgctgagagcttctcttttttgatgaga
aaggtgtccgattatgatgctctcttcacactcatgttctccgacctgtctgagagtcct
cagaaggctagaggagcaggtcagctgatctttgagatgtgtcaaggagtctgtaacatg
ttccaatcctgtgccactaaggctcttccagtggtgttgcagaaacttggccctgcagcc
ggtcaggacgttgatttgccttgggattcagtaaaagaagctctggatcacatggctgag
tcttcagccaactatgttgacaaagagtacctgctggtcctgtgggactccttacaagtc
tctctgaaagaagttcttggaaagttagacacaagcaatgctgttcaagctaatgagcac
ctggagaggattctgtacatctgccacacacttgtagagcatcgcaaaggagcaaagata
acaaaaccccagtctgtttgtgagacacttcttcagctagttcaggcaccaggactgtcc
tactcctgccacaggctgcttttacaagtagtctctgctctattgatgggggagaatctg
tcattacctgccagcagcatccatgaactattgaaaaaggtcttcaatagcagcatggac
agagacctcatgttatcatttaccaaagagatgtttgacatgaaacagtttgagcaattg
ttcttacccagtttactgcagtatctggagcagctcttctgcatggaagactctgtaaac
cgacagctggctctggagctgctggttggtctgattttgtctaaagctccaccccccact
gacggctccatggcttttgagaagtacccattgatcttcactggacagactgtcaggtca
actggacctgaaagagaccagacagtctctgttccccagcagattctttctgtcatagac
ttccctgccgatcagccgctttctgatctttcccatccctgggctgcgctggtgctgctc
ccacatgtcagaccgttagaagcatcaagcgttataccggccatcactgcactactgaac
agattactgcaagaggtgtgcagtaaaattctggggagaggtcagtcaagagggctattt
gtagcccgacaggctctaagcaccttgctcagcttcaaggagactgcagcggtacagtcg
ctcctgcctgccgagttggtcagaaacatcatcgagaaattccccacggatctttcagcg
ctgctgttaggagatctgtactacaccagactggcactcaacggctgctcggctcagctg
tcccatgattctctgctggaattgtaccagatactatattccaatttttcttccaacatt
tccaagattcgtttgctgaccctcagaattatgtctaactttgaggctgatcttccgaaa
ccagctgagggagaggagagctcaaatgcgcagacggtgttcgccgtgtgcctgcaggca
gagcaggtcccggccacagtgcaggactacagggagaaacttctacatcttcgtaaactc
cgtcatgacctagcgcagccctgtctgcccaagggacctttccatgaggttcctcttcgt
tatcttattgcaatgctgtttgtcaatttccgacctctctgggacgcagttattgatatg
ttggtgacccacgctaaagaaatggacaacaagtctttctggaaggtctattatgaaaat
ctggagatggttgctggtctagctgaggaagagcttcaggcagatgatgaggatggaggc
agtgaacaatatcaagctgcaaagcagcttcgagttccagggaccagtgtgattgaaagc
ggggatgtgggagttttgtttctggaacagctggaccatgtgctgaatccctctgagcgg
acggacttcacaaacttctgcagcctgctttggcgagcaatggccgctgagataccggaa
tgtaccaattgcctcaggaaagacaatctggagagacttctggatgacaagcactttaaa
gatgagattgtccatttcaacatctcagaagaaggagccgtggtacttccgtcgcataga
ccccagctcattcccatgcttatgaggatactatatgggcggatgtgccctagggttggt
aataggtttcagggtaaggcgaacacagcttcacgttcctccatagtgctgcgcttcctg
gcaggctgtcagccagaggagttgggcatgtttatagatcttctgctggagcctgtttgt
catcatgctgaaggagcgtgtctggctgcggtagaacgagctgtagccaagacgaacagc
tttttttatctcaaacccggttgcatcaatcctctgaagaacttacgccgtctggggatt
ctgcgcatacaagacttctttgatgactttgagtcttacagcttcactgcagatgagctg
gacgcagtgtttcaagctgtagtgtggcctaagccaagacgaacagctttttttatgctc
atccataaaatgggccatctcatccacatctacctgcccaaagttctgcagatcctgctg
tgcatcacggcctcagtgtcatttatactggatcacagagaacagctcaaacccggttgc
atcaatcctctgaagaacttacgccgtctggggattctgcgcatacaagacttctttgat
gactttgagtcttacagcttcactgcagatgagctggacgcagtgtttcaagctgtagtg
tggcctaaggtgtgtcttttgtccactgaaagcccgtattcaccaccgcccctcctgaaa
gtcatccgtgtgtggagccaaaatcctaggtattttcctttgcttgctaagcagagaccg
ggccaccctgattgtgacgtcctgctcaatgtatttgctctgttatcctccaaaaacgtg
tctgccatcacgacggccatggtaatggatatagccgagagcttgctgaccactcctgac
tatgaacccaaggagaatgaatcagatctgattgtgaacgactgtgtgatccccgaaccc
gatcagagctgtaacgtgtcagattctttgactatcggctgccatctgctccttcctcac
atcccagcactgctgcagtacctcagcggagtcgtgcgtaactctgaacgcctcaagaag
aagaaattcagagctcaagtcagcaaagagctcaacatcctctcaaagatcagtagattt
gtgactgaaaaagaacagagttcaacactcatcggtttacttctgccttaccttcacaaa
cccaaaactgctcaggaaacagagctggatatcctgggtactttgaagaacctgctgaga
cagtgttcagagcccagcatgtttctcaagcctctcagcaagcttttgtccatcatccac
aacagactttcacgtcaggctctgtgtgaagcgtttctgacgctgtcagacatggacggt
gaactgaagtacatcacagatgttgtgattcagctcaacgcatttgatagccgccatctg
gatgagattcactttgacatgcggctcgtggcgttccagaaggtcaccaagcacgttaaa
gagatgagctctctggatatgagatacctgactgctattatgcacaactgtttccactcc
ttagagatcggtgacatgtctctggcagacagcgccaccatgtgtttgtcagccgtaata
acgcagctctctgaagtcggatgcccagaggcagaatacaaggagattgtgcagtacacc
atactggatgcaatacgaaagggtttgaagagcaagactgagagtgtacgaaatgattac
actacagtgctggcctgtctggtgaataccttcccaaaccgatcagagtttcatgatctg
gtgcagctgacagactataatgatccagaatcagatttctttgagcatatgaagcacata
caggtttacagaaggggtcgagcgctcaggaagttcgccaggcagctgaccgagggcaag
attgtgatgtcatcgcgctccatgcagaattacgtcatgccctacgccatgatcgctcta
gttgacgaaaaactgctgaagtatgaacccatgacaacagccgccgtagaagttattggt
gccgtgtgcagacgcttgacctggtccaagtacttgttctacctcaaacacttcgtccat
gttttacaaaccggaatagctgagcagaaactggctgtcagcttgttgctgaccgttctt
gatgcgttccactttgaccatgagactctcagtaaagaaatcgaggcggctaagaacaag
aagacagatgagcccagtgttgtggtggaagaagctgaagacgaggcagcggaaaccatg
gacacggatgagagtgatgctgaagatgccatggaaaccgatgaagctggagcagctgtt
tccacagcaacggatgctgagacggaaggccctgccaaaccaaaagaaagcaaagagagt
cagatgaagaaagtttcccctgtcgtcagcagtggtcttccacagagtgaacgggatcta
gaggcgctcatttccagcattcatcacacagtcactcagagcgtcctgcccaaacttcac
aagtgcctcactgcgaaggttaaacgagatgacgagcacaagatggtgaagtctaaggag
gtgaaagatgaagaagtggtcagagtgcctattgcatttgccatggttcagctcatgaag
tctctgccaaaggaggtcatggaagccaacttgcctggcatcttcctgaaagtgtgtgtc
cacctgaggagccgtttccaggagatccgtgatgttgctcgaaacactttggtgaagatc
atagagacgcttgggcatcaatatcttcattatctgctcagcgagatgcaggcagtctta
gtgaaggggtatcaggtccatgttttgactttcaccgtgtaccatttgctctctgttcta
aaaccatccttgactggaggggatctcgacccatgcatggacatgctcatcgcgatcttt
aacaacgagttatttggagctgtagctgaggagaaggacatcaaaggaatcgtttccaaa
gtgatggaggcccgtcacagcaagagctccgactcgtatgagcttctcggccagttctgc
ggtcaggagcgcgtcattcacctcatcctgccactcaaagagatacttgagaacacagcc
agtctgaaggtgtcgaggcgagtgcatgctgtgctcaggaggattgtggcgggacttttg
ctcaatcagagcatgagccctcagtccatcctactgctcagccacggactcgtcagtgag
agtctgccgctcattaccagcaaaaacagagaagcacctccagatcctcgcctgcctccg
ccaagctgtttactgctgccagccactcctaagagaggaggagcgaaagccgccatcagc
agcagaacaaacatgcacatcctggtggaaacggggctcagtttgcttcactgttgtctg
aagagttcaaagatcaactcgtctgtcccgtcagtaaaggagatgctggatcctttcgta
tctctcctcctggactgtcttaactccatgcatgtgaaggtgattaccgaggctctgcag
gccttcatctggatcctgaagtttcctctgccggcggtggagcagaattacgatcagctg
accaagcagctctttgtcctgctgaaggactacgctaaagccggagccggccgtggagag
aacttccacctggttcagaactgctttaaggccatttctgttttggtgaagagcatgaga
aaacctgtaacagaaacacagctgcaagtgcttctgggatatgctgaggaggatatttat
gatcgcttgcggcaagccaccgcattcggcctcctgagggcgattctctccaggaagctg
gttgtgccggagatggaggatgttatgaaaaaagtagccaagtttgccatcgacgggtca
aacgaacaggtccgcatgcgctgcagacagatctatctgaagtacctgatggactatcca
ctgggcaagaaactcaggaaacattttgacttcatagttgctcagcttacttatgaatat
gacactgggagacagtctgccctggagctgatggctttcattttccagaaatttcctcag
gctctattgcatgagtactgcggtttgttttttgtgcctttgtcgttggccatgttgaac
gatgattctgcaacctgtaagaaaatgacagctctggccnnaacaagtctgctgagtcag
ctggatttgcagcatcaaaattccatgtttaacctggttaacacctggcttacgggcgag
aaggtggttctgaggcgacttggagctcaggtttgtgggctgtttgtggaatttgaaggg
gaaaagttcaaccggagactggacgtcctgatacctctcattgagaaagagatccatgct
tccaactttgaggatattgaggaagaggaggatgagaaggctgcagacagactgctcttc
tgttacctcacgctcgtcgtcaaactcatcaaagaatgcagctttttggagctccacaaa
cccgcagacctgctcaacagcatctggagtcatattgattcccatctgcgttaccctcat
tgctggaactggctgacggcgtctcagatctttggtttgctgtttgctgctcgtaaacca
gaggagctcttggccttatggagctcccaggagaacatgagtaaaaccccgcagcctatg
gcccctgcttttctcatagacaacctgtctcagaagatgagagagctggtcctgtccttc
tgttaccaactgcagtccaagttcttggatatttccgctggagagcaggtggtgaagaac
ttgctttatgtggccaaagtgatctacctcatctcaccagagtctgataccacaaatcca
gctgaagaacaggagggtgaggagaaagaaacgacggataacatggaggagaacgaaggg
gaggaagataagaagcaggagcttgaggagcaacagaatgagaacaggcctccgtctctc
ctctgggtgatgaagaagctttcattactggccaaaagagaagcagcagacacgccgaaa
gtgcctttgaagagaacttgtgtttttaagttcttgggagccatagctgtggatctcgga
aaagatcgacttgggccgtatctgaccnnaatcatcgctcctctctacagagagctggac
agcacatatgcagaccaaggtcaaccccacactaagaatctggctcaggagttgatcgag
ttgttgaagaagctggtgggtctggagcgattctctctggcttttgccgcagtgcagaaa
gaagccgctcagagacgagcttcacgcaagaaagccaaagccatacaggctgttgtaaat
cctgacattgctgccagaaagaaggtaaagaagcagttaaagaaaaacgaggccaaaaag
cagaaaatcgcatttgtgcgtacaggacataaagcaaagaaacataaaagcacgtcactg
aaagacttggctataatcagctga
DBGET
integrated database retrieval system
