Sinocyclocheilus rhinocerous: 107725930
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Entry
107725930 CDS
T04916
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107725930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107725930
Enzymes [BR:
srx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107725930
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107725930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
107725930
NCBI-ProteinID:
XP_016390843
UniProt:
A0A673NEJ7
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MHFGLCSSRILCVRVCAVSFLRVCGLKTTVSMPKRAKKNEEAVEGETGNGAEPAKKEKKG
KEPEAPILYEDPPDKMTSKDGRASNMKITSWNVDGLRAWVRKNGLDWVRKEDPDVLCLQE
TKCAEKALPSEITDMPEYPHKYWAGSEDKEGYSGVAMLCKTEPLSVTYGIGKEEHDKEGR
VITAEFPSFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLSGLDQRKLLVLCGDLNVAHQ
EIDLKNPKGNRKNAGFTPEEREGFTKLLEAGFTDSFRELYPEQANAYTFWTYMMNARAKN
VGWRLDYFLLSSALLPGLCDSKIRNTAMGSDHCPITLYLAV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcattttggtttatgcagttcacgcattttatgtgttcgtgtgtgtgctgtcagtttc
ttacgcgtgtgtggtcttaaaacaactgtaagcatgcctaaaagagccaagaagaacgag
gaagctgtcgagggggagactggcaatggagctgaacctgcaaagaaagagaaaaagggg
aaggagccagaggccccaattctgtatgaagatcctccagataagatgaccagtaaggat
ggtcgtgcatccaacatgaagatcacctcctggaatgtggacggtctgcgcgcttgggtc
agaaagaacggccttgattgggtgcgcaaggaggatccagatgtgctgtgtctgcaggag
actaagtgcgctgagaaagccctgccatctgagatcactgacatgcctgagtatccacac
aagtactgggctggatcagaggataaggagggttacagcggagtcgccatgctctgcaag
actgaaccactcagtgtcacctatggtattggtaaagaggaacatgataaagaaggtcgg
gttatcactgctgagtttccatctttcttcctggttacggcgtatgtgcctaatgccagt
cgtggtttggtgcgactcgactaccgtaagacctgggatgtggatttccgggcctacctg
agtggcttggaccagcgcaagctcctggtgctgtgtggagatctgaatgtggcccaccaa
gagattgatctcaaaaaccccaagggtaaccgcaagaacgcaggcttcacccctgaggaa
cgggagggcttcaccaaacttctggaggctggttttactgacagttttcgggagctgtat
ccggaacaagccaatgcctacaccttctggacctacatgatgaatgctcgagccaaaaac
gtcggctggcgtttggactactttttgctgtcgtccgccttgctcccaggtctgtgtgac
agcaagatccgaaacacagccatgggaagtgaccactgccctattaccttgtatttggca
gtgtag
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integrated database retrieval system
