Sinocyclocheilus rhinocerous: 107726001
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Entry
107726001 CDS
T04916
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107726001
09123 Folding, sorting and degradation
03018 RNA degradation
107726001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107726001
03041 Spliceosome [BR:
srx03041
]
107726001
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107726001
mRNA degradation factors
5'-3' decay
Lsm complex
107726001
Spliceosome [BR:
srx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107726001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
107726001
NCBI-ProteinID:
XP_016390941
UniProt:
A0A673NBH3
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MSTALESYINRTVAIITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgctcttgagagctacattaaccggacggttgctattatcacttcagatggc
agaatgattgtggggacgctaaagggcttcgatcagacgatcaatctcatcctggatgaa
agccatgagcgggtgttcagctcttcccagggcgtagagcaggtggttctgggactgtat
attgtcagaggcgataatgtggctgtaatcggggaaatcgatgaagaaacagattctgcg
ctggatcttggaaacataagagcagaaccgctcaattctgtggcgcactga
DBGET
integrated database retrieval system
