Sinocyclocheilus rhinocerous: 107726072
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Entry
107726072 CDS
T04916
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107726072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107726072
03009 Ribosome biogenesis [BR:
srx03009
]
107726072
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107726072
Spliceosome [BR:
srx03041
]
Complex A
U2 snRNP components
U2 related factors
107726072
Complex B
107726072
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107726072
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
90S particles
Helicases
107726072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
Glyco_hydro_98M
Motif
Other DBs
NCBI-GeneID:
107726072
NCBI-ProteinID:
XP_016391033
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MAEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPSGAIGRKVV
VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRP
GKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMR
ALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEILSITAMLSVPA
CFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFVNYRSLMSAD
NVRQQLSRIMDRFSLPRRSTEFTSRDYYINIRRALVTGFFMQVAHLERTGHYLTVKDNQV
VQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPGYYEMSNFPQCEAKR
QLERIVTKLQTKEYSQY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatcgacgaagcctgcaaacggatcaaacgtgagattgacgatctcggccct
gatgttggcgacatcaaaatcatcccgctctactccacgctgccaccacagcaacagcag
aggatcttcgagccgcctcctccccgcaaacccagcggagccatcggcagaaaggttgtg
gtttctacaaacatcgctgagacgtccctgaccatcgatggcgtggtgtttgtaattgat
cctggctttgccaagcaaaaggtgtataaccctcgcattcgagtcgagtcgctgctcgta
acggctattagtaaggcttcggcccagcagagagccggccgtgctggacgtacgcgccca
ggaaagtgcttccggctctacaccgagaaggcctacaagactgagatgcaggacaacaca
taccctgagattctcaggtcgaatttgggctctgtggtgctacagctcaagaagcttggt
atcgatgacctagtgcactttgacttcatggacccaccagctcctgaaaccctgatgcga
gccctggagctgttaaactatctcgcggcgctgaatgacgacggtgacctgacggagctg
ggctccatgatggctgagttccctctcgacccccagctggccaagatggtcatcgccagc
tgcgacttcaactgctccaatgagatcctgtccatcaccgcgatgctatcagtccctgct
tgctttgtgcggcccacggaagctaagaaggcagccgacgagtccaaaatgaggttcgcc
cacatcgacggggaccacctgaccttgctcaacgtctaccatgccttcaaacaaaaccac
gagtcggtgcagtggtgctatgataactttgttaactaccgctcgctgatgtcggctgat
aacgtgcggcagcagctctcacgcatcatggaccgcttcagcctgccgcgacgcagcaca
gagttcaccagccgagactattacatcaacatccgccgcgctctcgtcacaggcttcttc
atgcaggttgctcacctggagcgcaccggccactatctcacagtgaaggacaaccaggtg
gtccagttgcacccttccaccgtactggaccacaagcccgagtgggttctctataacgag
tttgtgctgacaaccaagaactacatccgcacctgcactgatatcaaacccgaatggctg
gtgaaaatcgctccaggatactacgaaatgagcaacttccctcaatgcgaggctaagagg
caactggagcgcatcgtcactaaacttcaaactaaggagtactctcaatactga
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