Sinocyclocheilus rhinocerous: 107726731
Help
Entry
107726731 CDS
T04916
Name
(RefSeq) afadin-like
KO
K05702
afadin
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04517
IgSF CAM signaling
srx04519
Cadherin signaling
srx04520
Adherens junction
srx04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107726731
04519 Cadherin signaling
107726731
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107726731
04530 Tight junction
107726731
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
AFDN
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RASSF8-10_RA
RA_3
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
107726731
NCBI-ProteinID:
XP_016391907
LinkDB
All DBs
Position
Unknown
AA seq
1755 aa
AA seq
DB search
MRFYFQDRVAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEE
RKLDLDEKPLVVQLNWNKDDREGRFVLKNENDIMPKRTLTNGPEKEKEGVIQNFKRTLSK
KEKKKEKKREEAAFSRIPDVDDHTLNREDGENSRLAAEVYKDMPETSFTRTISNPEVVMK
RRRQQKLEKRMQEFRSGDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVAEALE
KYGLEKENPRDYCIAQVIHANDKPVKETILDDTDCPLQILRDWTSDKDPLVFQLKKRPPD
YAPRKGRKSDNRMGPPHGSIPPEKLPYLVELSPGRGSHYAYYYRHHEDGSDSRDKPKLYR
LQHSLTEVGSDRSEDGSIQLFGPGILPHHCDLMHADGLVTVTPVSLDAETFVDGQRISDT
TVLRSGVTVQFGAIHVFKFVDPSYDHSMSKRGYTWSLRSPGFSLVINNPVEMRMLIQTRT
AQFGICDRMLYSRTGAGSLERWASVENGVNLSYLNWFIKQQFFPRRSQDGPELTLPANIE
FRENSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVMSSQYRPDISPSERTHKVIAI
VNKMVSMMEGVIQEIAEGDQKQKNIAGALAFWMANASELLNFIKQDKDLSRITLDAQDVL
AHLVQMAFKYLVHCLQSDLNNYMPAFLEDPDEQNPQRPKIEDVLHTLTGAMSLLRRCRVN
AALTIQLFSQLFHFINMWLFNKLVTEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAA
DCHLSRIVQATTLLTMDKYSMQDVQNINNTCFKLNSLQLNALLSNYHCAPDEPYIPPELI
DHVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLEPL
CQRGFCRLTPHPRSPGTWTIYFEGADCDSHFSADTSELPMRKEPEIATVTLKKHNGMGLS
IVAAKGAGQDKLGIYIKSVVKGGAADIDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRT
GSVVTLEVAKQGAIYHGLATLLNQPSPMMTRASDRGRGDKGKMRPKSEGFELYNNSVQNG
SPESPQGTWDTYPEPKKEDRLLKNRADHRSSPNVANQAHSPGGKPVYPGAPGKITSVSTG
NLCPDEEPSPPHPEAYPIPTQTYPREYFTFPASKSQDRMGPGQPWQNNEPEPLPPMDNHS
NNSMAIQRVARSQEELCEMPGRYPGERLRQEDLMHLQQQQRDAEYQRGSGEHWNHQMSSS
VESSTSSQEHLNYSSSSGSRIQGNHKSGPGRWKTPIAPHSGPVCVSQPSRSDLPPPPPPP
AHYDYEPQTDLPLPPPPSITQQQAAAAVATVERKKREEQQRWYEKEKARLEEERERKRRD
QERKLVQIRNPPGPVMHNNQHGPLPPAPQHQQMPHPQPPMQVPQPYLPPVQQPQPHLPPV
QQPQPPQPQPARPDKLSSLPRQPPQDTVIRDLLPQQQPRTIERRDLQYLTISKEELSASD
SLSPDPWKRDAREKLEKQQQLHIVDLLDKEIQELQAKPERTAEENDRLRKLMLEWQFQKR
LQESKQNEEDEEEEDDEDHNPYCPGMFLAAHHYVPAHCANFFLLLSSRKPLLFFISYYFF
ILSLPTLWLLCMFLFLLQQTAVPAISVLDLLQDEERRRKQQLEEIRKREAEERAKQEEER
RWREEERARRETEEKRRQEEEYYTRLEAERRRQHEAMPTVLLPRQGSPLSLPPNPASSHR
PTRKDLIHTLETQQD
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttacttccaggatcgagtggcggggaactttgccacaaagtgtatccgagtg
tccagcacggcgaccacgcaggatgtgatcgagacgctggcggaaaagttcagaccggat
atgaggatgctgtcttctcccaaatactccctctatgaggtccacgtcagtggcgaagag
aggaaactggacttggacgagaaaccactggtcgtacagctgaactggaacaaagacgac
agagagggccgcttcgtactcaagaacgagaacgacatcatgcccaagagaacactgaca
aatggccctgagaaagagaaggagggggtgatccagaacttcaaaagaacactgtccaag
aaggagaagaagaaagagaagaagagggaggaggcggccttttccagaattccagatgta
gacgatcacacactgaaccgcgaggatggagagaactccagattggctgctgaggtatat
aaagacatgccagagaccagtttcacaaggaccatttctaaccccgaggtggtgatgaag
aggagacgacagcagaagctggagaagaggatgcaagaattccgcagcggagacggtcga
ccggattcaggagggactctgaggatctacgccgatagtctgaagccaaacattccctac
aagaccatcctgctctcaactactgatatggctgactttgctgtggccgaggctctggag
aaatacgggctggagaaggaaaatcccagagattattgcatcgcccaggtgattcatgca
aatgataaaccagtgaaggagaccatactagacgacacagattgccctctgcagatcctc
agagactggacaagcgataaagatcccttagtattccaactgaaaaagcgtcctccagac
tacgctccaaggaaaggacgtaaatccgacaacaggatggggccgcctcacggatccatt
cctcccgagaaactgccctacctggttgaactgagcccagggcgagggagtcattatgcc
tactactaccgtcatcatgaagatgggtcagactccagggataaacccaaactttaccga
ctacagcacagcctcactgaggtcggatctgaccgaagtgaagatggaagcattcaactg
tttgggcctgggattctgcctcaccactgtgacctgatgcatgcggacgggcttgtgacc
gtgacccctgtcagtttggacgctgagacgttcgtggatggacagcggatctccgacact
acggttctgcgcagcggcgtgacggtccagttcggagccattcacgtcttcaaattcgta
gaccccagctatgaccacagcatgtccaagagaggctacacctggtccctccgctcacct
ggcttcagtcttgtcatcaataatccagtggagatgagaatgctcattcaaacacgcaca
gcacagtttggcatctgtgacaggatgttgtacagcaggactggagcggggtctctggag
cggtgggcgtctgtagagaacggtgtcaatctgtcctatctcaactggttcatcaagcaa
caattctttccccgcaggtcccaggatggcccagaactcactctgccggccaacatcgag
ttcagggaaaactccgaggatgccttcctgtctgccatcattaactacaccaacagctca
acggtgcacttcaagctgtcccccacctatgtgctgtacatgacctgccgttacgtcatg
tccagccaataccggcctgacatcagcccctctgagcgaacacacaaggtcatcgccatt
gtcaacaagatggtgagcatgatggaaggagttatccaggagattgctgaaggtgatcag
aaacagaagaacatcgcaggggctctggccttctggatggctaacgcctcagagctgctg
aacttcatcaaacaggacaaggatctgagtcgcatcacgctagatgcacaggatgtcctc
gctcacctggttcagatggcttttaaatacctggtgcactgcttgcagtcagatctgaat
aactacatgccagctttcctggaagatcccgatgaacagaacccacagaggcccaagata
gaggacgttctgcacacgctaacgggcgccatgtctcttctgcggcggtgccgtgtcaat
gcggccctcaccattcagcttttttcgcagctcttccacttcatcaacatgtggctcttt
aacaagctggtgacggaggctgactcaggcctgtgctcgcactactggggcgccatcctg
cgacagcagctcagccacatcgaggcgtgggctgagaaacagggtttggagctggccgca
gactgccacctcagtcgcatagtccaggcaacgaccctcctcaccatggacaaatactcc
atgcaagatgtgcagaacatcaacaacacctgcttcaagctcaactctctgcagctcaac
gctctgctgagcaactaccactgcgctcctgatgaaccctacattcctcctgagctgatt
gatcacgtggtggctgtggccgagaacacggcggacgaactggcccgaagcgatgggcgg
gaagtacagcttgaagaggaccctgacctccagctgcctttcctactgcccgaggatggc
tactcatgtgacgtggtgcggaacattcctaacggattccaagagttcctagagccgctt
tgccagagaggtttttgtcgattgacacctcatccacgctctccaggaacttggaccatc
tattttgaaggagctgattgcgacagtcacttctcagctgacacgtcggaactgccaatg
cggaaggaaccggaaattgcgacagtgactttgaagaaacacaatgggatgggcctcagt
attgtggcggccaagggtgccggacaggacaaacttggtatttacatcaagtctgttgtc
aaaggaggtgcggcagacatagatgggcgtctggctgccggagaccagttgctcagcgtg
gatggaagaagtctggttggcctctcgcaggagagggcggcggaattgatgacacgaacc
ggctctgttgtaacgctcgaggtggccaaacagggagccatttaccacggcctggccacg
ctcctcaaccagccgtcccccatgatgacccgcgcatcagaccgtggacgtggagacaag
ggaaagatgagaccaaagagcgagggctttgagctctacaacaactctgtccagaacggc
tcgcctgagagcccccagggcacgtgggacacctatcctgaaccaaagaaggaggacagg
ttgttgaagaaccgtgcagaccaccgatcaagcccaaatgtggctaaccaggcccatagt
ccaggcgggaagcctgtttacccaggagccccaggaaagatcacttcggtctcgacgggt
aacctctgtcctgatgaggagccctctccaccccatccagaggcgtatcccatccccact
cagacatacccaagggaatacttcaccttcccagcctccaaatctcaggataggatgggc
cctggccagccctggcaaaacaatgaaccggagcctctcccccctatggataaccactcg
aacaacagcatggctatacagcgggtggcgcgctctcaggaggagctgtgcgagatgccg
ggcaggtacccaggtgaacgcctgcgccaggaagacctgatgcacctgcagcagcagcag
cgtgatgccgagtaccaacgaggcagtggggagcactggaaccaccagatgtcctcctcg
gtggagtccagcacctccagccaagagcacctcaactactcgtcgtcttccggctccagg
atccaaggcaaccacaagagcggccctggccgctggaagaccccgatagcaccccactcc
ggccccgtgtgtgtctcccaaccttcccgttcagatcttccacctcctcctcctcctcct
gcgcactacgactatgagccacaaactgacctgccgcttcctccaccgccctctattaca
cagcaacaggcagcggccgctgtggccacggttgaacgcaagaaacgcgaggagcaacag
cgctggtatgagaaggaaaaagcccggcttgaagaggagcgagagaggaagagaagagac
caggagaggaagctggtgcagattcgcaaccctcccggcccagtcatgcacaacaaccag
cacggcccattgccgcccgcccctcagcaccaacagatgccccatccacagccccccatg
caggtgccccaaccgtaccttcccccagtccagcagccccaaccgcaccttcccccagtc
cagcagccccaaccgccacagccacaacccgcccgaccagacaagctatccagccttccc
cgccagccgccacaggacacagtaattcgtgacctcttgccccagcagcagccacgcacc
atcgaaagacgtgacctgcaatacctcaccatcagcaaagaggagctgtccgccagcgac
agcctatcgcccgacccgtggaaaagggacgcccgagagaaactggagaagcagcagcag
cttcacatcgtggaccttctagacaaggagatccaggagcttcaggccaaacctgaacgc
acggctgaggagaacgaccgtctgcgcaaactcatgctggagtggcagttccagaagaga
ctgcaggagtccaagcagaacgaggaggatgaggaggaggaggatgacgaagatcacaac
ccatactgccctggaatgttcctggcagcacatcactacgtcccagcccactgcgccaat
ttttttttacttttatcttctcgaaaacccctccttttctttatttcttactactttttt
attctctctctcccaaccctttggttgctctgtatgtttttgtttctcctgcagcagact
gctgttccagcaatctctgtactagacttgctgcaggacgaggagcgacgacggaaacag
cagttggaggaaatccgtaagcgtgaggcagaagagcgagccaaacaggaggaggagaga
cgctggagagaggaggagagagccagacgagagaccgaggagaagaggagacaggaggaa
gagtactacacccgcctggaggcagagcggcgccggcagcacgaggcaatgccaacagta
ctgctcccaaggcagggcagccccctctccctcccgccaaacccagcttcatcccatcgg
ccaactcgaaaggatttaattcatacactggaaacacaacaggactag
DBGET
integrated database retrieval system