Sinocyclocheilus rhinocerous: 107726924
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Entry
107726924 CDS
T04916
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04115
p53 signaling pathway
srx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107726924
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
107726924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107726924
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107726924
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107726924
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107726924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
zf-C3HC4_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
zf-C3HC4
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_2
Beta-prop_EML
zf-RING_UBOX
Beta-prop_DCAF4
zf-C3HC4_3
Beta-prop_WDR90_POC16_2nd
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
zf-RING_10
WDR90_beta-prop_4th
zf-rbx1
UvrD-helicase
zf_C2H2_10
Sina_RING
Terminase_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
107726924
NCBI-ProteinID:
XP_016392102
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MSNTRQQQQQQSGGSAGSVPGTSSGSMSSSSGGGAGGANSGSGGAQNGNSSGNGVSSRTL
GTVAEGQSARLGSSSRKRPLYNGLINPYEDKSNDFVCPICFEMIEEAHMTKCGHSFCYKC
IRQSLEDSNRCPKCNYIIDNVDQLYPNFLVNELILKQKQRSEEKRLKRDHPNGTKWQVFQ
DVLGADQENMDLANVNYILEYLLQKKKQLEAESQAAQRQILMEFLKEARRNKREQLEQLQ
KELNFLEEDIKRVEEMSGMYTVSEMDPNLDSTVPQFEAPSPAPSSSIIDPTEYMQHPFGG
SSQSKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNRMSRITDDSRTVNQLDDFMECLSKF
TRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVD
IHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSV
DFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHC
VHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFKGH
INEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEF
VSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacactcggcagcagcaacagcagcagtctggcggttcagcggggtccgtcccc
gggacgagctctggaagtatgagtagcagtagcggcggcggcgccggtggagcgaacagc
gggagcggcggcgctcagaacgggaacagctcgggtaacggggtgtcctcgcggactttg
ggcacggttgccgagggacagagcgctcgactaggctcgtcgagtaggaaaagacccttg
tacaatggtctgatcaatccctatgaggacaagagtaatgattttgtatgccctatatgt
tttgagatgatagaggaagctcacatgacaaagtgtggccacagtttctgttataaatgt
atacgacagagtttggaggacagcaacagatgcccaaaatgtaattatatcattgataat
gtggatcaactctaccccaacttcttagtgaatgaactgatcctaaaacaaaaacaaaga
tctgaagagaagcgtctgaaacgggatcaccctaatggaaccaaatggcaggtttttcaa
gatgtccttggtgcagatcaagagaatatggatttagcgaatgtcaactacatattagaa
tacctgttgcaaaaaaagaaacaactggaggcggaatcacaggctgctcagcgccagata
ttaatggagttcctgaaagaagccagaagaaataaaagagagcaactggagcagttacaa
aaagaactgaactttttggaggaggatatcaaacgagttgaggaaatgagtggtatgtac
acagtgagtgaaatggaccccaatttagacagtactgtaccccagtttgaagctccctct
cctgcacccagcagtagcataatagaccccacagaatacatgcaacacccttttggtgga
agctcacagagtaaaagacaaacttggtacaacagcactctggcgtcacgacgaaagaga
ttgacggcacactttgaggatctggaacagtgttatttctccaataggatgtctcggata
acggatgacagcaggactgttaaccaactggatgatttcatggagtgtctatcaaaattt
acacgttacaactctgtgaggcctctggccaccctatcttacgctagtgacctctataat
ggctccagtattgtgtccagcattgagtttgaccgcgactgtgattactttgccattgcc
ggtgtcactaagaaaattaaagtgtttgagtacggcactgtgatccaggatgctgtggac
attcattatcctgtcaacgagatgacatgtaactctaaaattagctgtatcagttggagt
agctaccacaaaaatctgttagcgagcagcgactatgaggggactgtcattctttgggat
gggttcacgggacagcggtctaaggtctaccaggagcatgaaaagcggtgttggagtgtt
gatttcaaccttatggatcccaagctgttagcatcaggatcggatgacgcaaaagtcaag
ttgtggtccaccaacctggacaattcagtagccagcattgaagcgaaggccaatgtatgc
tgtgtcaagttcagtccatcctctcgatatcacctcgcctttggttgtgcagaccactgt
gtgcactactatgacctgagaaacactaagcagcccatcatggttttcaaaggccacagg
aaagcagtgtcatatgccaaatttgttaacggagaagagattgtgtctgcatcaacagac
agccagctgaaactctggaatgtgaacaagccacattgtttgcgctcctttaaaggccac
atcaacgagaagaactttgtgggtctggcatctaatggagactatgtagcatgtggaagt
gaaaacaactcactgtacttgtactacaaggggctctccaagacgctattaactttcaag
tttgacactgtgaagagtgtcctggacaaggacaagaaagaggatgataccaatgagttt
gtcagtgcagtgtgctggcgagctctacctgatggggagtcaaatgtgttgattgcagcc
aacagtcaaggaacaatcaaggtacttgaactggtctga
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