Sinocyclocheilus rhinocerous: 107727188
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Entry
107727188 CDS
T04916
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107727188
Spliceosome [BR:
srx03041
]
Common components
Common spliceosomal components
General mRNP proteins
107727188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RRM_5
RBD_DEAH11
RRM_7
CDC45
Motif
Other DBs
NCBI-GeneID:
107727188
NCBI-ProteinID:
XP_016392460
UniProt:
A0A673G6K0
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MADDLDIEAMLEAPYKKDDNKSLSTNGHEERSKKKKKSKSRSRSRSRERKRSKSHDRKKS
HDRRRSRSKDRKRSRSRDRRRSRSRSRERGGRYRAPFSGLKFNGGPRGKTGPPPAIKLSR
KRSRSRSPFKKDKSPIRKPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDV
RIISDRNSRRSKGIAYIEFVDTTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNL
QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFADAE
CAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMAR
LAEGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNINVPTNQALNLPSQPIATHC
FQLSNMFNPNSENDLGWEIEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPSIPAAM
AAVSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatttggacattgaagcaatgctcgaggctccatataaaaaggatgacaac
aagtccttaagtaccaatggccatgaggagcggagcaagaagaaaaagaagagcaaaagt
cgcagcagaagccgcagccgggaaaggaagagaagcaagagtcacgatcgcaagaaaagt
cacgaccgcaggaggagccgcagcaaagatcgaaagcgcagccgcagcagggatagacgg
cgcagccgttccaggagcagggagcgtggtggtcgctacagagctccattttctggcctg
aaatttaacggtggtcccagggggaagactggcccaccacctgccatcaaactaagccgt
aaaaggtctagaagccgcagtcctttcaagaaagacaaaagccctattagaaagcccatt
gataatctcacccccgaagaaagggatgcacgcacagtgttctgcatgcagctggcagcc
agaatccgaccacgagacttggaagaatttttttctgcagtgggaaaagtgcgagatgtg
agaattatctctgatagaaactctagaagatctaaaggaattgcatacattgagtttgtg
gataccacctctgtacctttggcaattggcctgtctggtcaaagactactcggagtacca
atcattgtgcaggcttcacaggctgagaaaaacagagcagctgcattggccaacaactta
cagaagggcagttctggacctatgagactttatgttggctcattgcattttaacatcaca
gaagacatgctcagaggcatctttgagccatttggaaggattgaaagtattcaactgatg
atggacagtgaaacaggacggtcaaaaggatatggctttatcacatttgctgatgccgaa
tgtgctaagaaggctctggaacagcttaatggctttgagttggctggcagaccaatgaaa
gtgggacatgtgacggagcggactgatgcctccactgccagctccttcctggacaatgat
gagctggaaaggacaggcattgatctgggaactactggtagacttcaactcatggccaga
ctggccgagggtactggtctgcagatcccacctgctgcacaacaggcccttcagatgagt
ggctccatggtagccatggctgcagctactgctgctatgaaccctggattgagttttaac
atcaatgtgcccacaaaccaagctttgaatctaccatcacaaccaattgcaacgcactgt
ttccagctgtctaacatgttcaatccaaactcagaaaatgatcttggttgggaaattgag
attcaggatgatgtcattgaggagtgcaacaaacacggtggagtcatacacatatatgtg
gacaagaaatcagctgaaggtaatgtctatgtgaagtgtcccagcattcctgctgctatg
gctgcagtcagtgcattacatggacgctggtttggaggtaaaatgatcacagcagcttat
gttcctcttcctacataccacaaccttttcccagagtcagtgcaggcaacacagcttctt
atgcccagtcgccggtga
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