Sinocyclocheilus rhinocerous: 107727356
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Entry
107727356 CDS
T04916
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
srx03012
]
107727356
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107727356
Translation factors [BR:
srx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107727356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
RWD
zf-CCCH_4
HA2_N
zf-CCCH
AAA_19
nSTAND3
AAA_22
NPHP3_N
NB-ARC
Torus
AAA_14
GIT_CC
UBA
ATPase_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107727356
NCBI-ProteinID:
XP_016392684
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MSGRRRSKPNRGGGRFNKPRGGGGGRGGGGGGGRGGGGGNRKAASGCWDDGDDFSLDLGR
SRSFKPPSSRGSRGVRGARGGTGRGRSQALARKHDEEEMRSRFRPEQVQLPLQKIHMTSE
NKLQVKELLRELQSHEYHTPNSGSDYEGGEDEEDEEEEYDELDRREEGQFWQTHDDGVEC
AESDDWMEDSVEEKHTKPEPVISLFALGTLCRYGFDRERCRQALEAGEESGRGEVGATLE
LLLSQIFTERFDSSALSPQTSDLPSQEECVAPRQEEALALTAIYGDRFCERISNRVWTIQ
LDLQWLDERRNKISDAANCKKQSGSNQICKFYMKGAGCRYGNRCRFKHQTPESSSSREFC
KASQPGFSSTEVPVYQLEIRFQPGSLYPFQAPLVAFSSTDESLLGAGRLSVTEYLFGQAL
SAAQEGEPVVYTLISCLEEDGPARELLSAAHHKYSAPPPVLAPPTVTPARNRSSRNTVEN
NITTNTATRDQLTNTTESTNHRVRQKEDASYLREDIVDEQEDGDDDEDEEQCIPVENESY
VNLRKRMVKIEIKTEQILQENKKLCREFKRKQSSRRYTSMQEQRQKLPAWQKREAILDCL
DKNQVLVISGMTGCGKTTQIPQFILDHFLQTGRPDRVANVICTQPRRISAITVATRVAQE
RAEALGHSTGYQIRLETVRSSSTRLMFCTTGVLLRRLEGDSELSGITHVIVDEVHERTEE
SDFLLLVLKDLIVKRMDLKIIMMSATLNAELFSQYFNNCPSIHIPGRTFPVEQFFLEDAI
AKTKYVIEDGSPYRCSTKQNRPSGQGGTAGKGRAPVEDFDDDGSWSFTSLMKKDSVKDSI
PDQQLSQQDLTVRYSNYSKSVVKTLAAMDLDKINMDLVESLLEWIVDGEHSYPPGAVLVF
LPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPHEGVTKIIIST
NIAETSVTIDDVVYVIDSGRMKEKRFETLRSMESLEDVWVSRANALQRKGRAGRVASGVC
FHLFTRHRFTHHLSQQQLPEIQRVPLEQLCLRVKVLEVFTERPLESVFSQLIEPPAEGSL
EAAKQRLCALGALTDEESLTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAF
KSPFVSPWDKREEANEKKLGFSLANSDHLALLQAYKGWCNAAQGGFKAGYQFCRENFLSI
RGLQEIACLKRQFAELLSDIGFVKDANLNSDNTKLMSAMLCAALYPNVVQVRSPQGKYKL
TSKGAVKMQPKAEELCFMTKSDGAVHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFLRDC
SMVCVYPMVLFGGGQVSVELQRGEFIISLDDGWIRFAAASHEVAELVKELRWELDQLLEE
KIRNPSMDLISCPRGSRIIHTIVSLISTQ
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaggaggagaagcaaacccaatcggggtggaggacggttcaataaacccaga
ggaggtggaggaggaagaggaggtggaggtggaggaggaagaggaggtggaggtggaaac
aggaaagctgctagtggatgttgggatgatggggatgatttcagcctggatttgggtcgc
agtcggtcattcaagcctccctcatctagaggttcaagaggtgtccgtggggctcgtgga
ggaaccggcagaggaagatctcaggcactggccagaaaacacgacgaggaggagatgaga
tccagatttagacctgagcaagtgcagctgcccctgcagaagatacacatgacttcagag
aacaaactgcaggtcaaagaactgctgcgggaacttcagagccacgagtatcacacacca
aatagcggctctgactatgaaggtggtgaggatgaggaggatgaggaagaggagtatgat
gagctggaccgtcgtgaggaaggtcagttctggcaaacccatgatgatggagtagaatgt
gccgagagtgatgactggatggaggactcggtcgaggagaagcacacaaagccagagccg
gtgatctctctgtttgctctgggcactctttgcaggtatggctttgaccgtgaacgctgt
cgacaagctttggaggctggagaagaaagtggacgtggtgaggttggagcgacattagag
ctcctcctatcccagattttcacagaacgtttcgactccagcgccctcagcccccaaaca
tcagacctcccttctcaggaggaatgtgtagctccgcgacaggaagaggccctggctttg
accgcaatctacggggatcgcttctgtgagcgcatcagtaatcgtgtttggacaatccag
cttgatttgcagtggctggatgaaaggcggaacaaaatttcagacgctgcgaattgtaaa
aagcagtcaggatccaatcagatttgcaagttttacatgaagggggcaggttgtaggtat
ggaaaccgctgcaggttcaagcaccaaactcctgaatcgagctcttccagagaattttgt
aaggcaagtcagccagggtttagcagcacagaagttcccgtttatcagctggagattcgc
ttccaaccaggtagtttatatccttttcaagctccgctcgtggccttcagtagcactgat
gaatcgctcttaggcgcgggacgcctcagtgtcacagagtacctgttcggtcaggcactc
agtgctgcgcaggaaggagagccggtggtctacaccctcatttcctgtctggaggaggac
ggacctgctagagagctgctgtcagctgcccatcacaaatacagtgctccgccccctgtt
ctggctccgcccaccgtcactccggccaggaatcggagcagtaggaacactgtagaaaac
aacattacgaccaatacagcaactagagatcaattaaccaacaccaccgagagcacaaac
cacagagtgagacagaaggaagatgcttcatacctaagagaggatattgttgatgaacaa
gaagatggtgatgatgatgaagatgaagaacaatgtatcccagtggaaaatgagagctat
gttaacttgaggaagaggatggtgaagatcgagatcaaaactgagcaaatactgcaagag
aacaagaagctctgcagagagttcaagaggaaacagtcgtcgaggcgctatacatcgatg
caggagcagaggcagaagctgcctgcatggcagaagagagaggccatattggactgtttg
gataagaaccaggttctcgtcatcagcgggatgactgggtgcgggaaaaccactcagatt
cctcagtttatcctggatcatttcctccagactggacggccggatagagtggccaacgtt
atttgcactcagccacggcgcatctctgccatcactgtggcgacccgagtggcccaggaa
cgagcagaggccttgggtcactccacaggctatcagatccgtctggagaccgtcaggtcc
tccagcaccaggctgatgttctgcaccaccggcgtccttttgcggaggctagagggcgac
tctgagctcagtggcatcacacatgtgattgtggatgaggtccatgaacggacagaagag
agtgacttcctgttgctggttctgaaggatctgattgtaaaaaggatggatttgaaaata
attatgatgagtgcaaccctgaatgccgagctcttctcacagtacttcaacaactgcccc
agcatccatataccaggacgtacattcccggtggagcagttcttccttgaagacgccatc
gctaagaccaagtatgtaattgaagatggaagtccatatcggtgctccacaaagcaaaat
cgtccctctggtcagggtggcacggctgggaagggacgggctcctgttgaggattttgat
gatgatggtagctggtcatttacgtccttaatgaaaaaggattcggtcaaagactccatc
cctgatcagcagctcagtcaacaggatcttaccgtccgatattccaattactcaaagtct
gtagtgaaaacattggctgctatggatcttgataaaatcaacatggacctggtggagagt
ctgttggagtggattgttgatggagagcacagctacccaccaggtgctgttttggtcttc
ctaccaggacttgctgaaataaagcaattatacgagcagctgcagtctaacaggatgttc
aataatagaagaacaaacaggtgtgtagtgtatcctctacactcgtccctgtccaatgag
gagcagcaggcggtctttacccgcccacatgagggtgtgaccaaaatcatcatctccacc
aacatcgctgaaacttctgtcaccattgacgatgtggtgtatgtcatagactctggccgg
atgaaggagaagaggtttgagacgcttcgcagtatggagagtctagaggacgtatgggtg
tctcgtgccaatgctctccagagaaaaggccgtgctggtcgtgtggcgtcaggcgtctgc
ttccatctgtttacaagacatcgcttcacacatcacctgagccaacagcagctgcctgag
attcaaagagttcccctggagcagctctgtctaagggttaaggtgttggaggtgtttacg
gagcgtcctctggagtcagttttctctcagcttattgagccgcccgcagagggcagtctg
gaggccgctaaacagcgcctgtgtgccctgggcgccttgacggacgaggagtctctgact
cccctcggttggcatttggcctgtctgcctgtggacgtccgcatcggtaaactcatgctg
ctgggagccatcttccgctgcctggaccctgccctcaccatcgccgctagcctggccttc
aagagtccattcgtgtctccctgggataaacgagaggaagctaacgagaagaagttgggg
ttctctctggcaaacagcgaccatctggccttgctgcaggcgtacaagggttggtgtaac
gcagcacagggcggctttaaggctggttaccagttctgcagagagaacttcctctcgatc
cgaggcttacaggagatagcatgtcttaaaaggcagtttgcagagcttctgtctgacatt
ggctttgtgaaggatgccaacctgaactctgataacacaaagctgatgtcagccatgttg
tgtgcggctctctaccctaacgtagtccaggtgagatctcctcaggggaagtataagctc
actagtaaaggagctgtgaagatgcagcctaaagcagaggagctgtgcttcatgaccaag
agtgatggagccgtccacatacacccctcgtctgtcaacttctctgtgcggcactatgac
agcccatacctggtgtaccatgagaaagtgaagaccagtcgagtgtttctccgtgactgt
agcatggtgtgcgtgtatcccatggtgctgttcggtggcgggcaagtgagcgtggagctg
cagcgtggagagttcatcatctctctggacgacggctggatcagatttgcagctgcgtct
catgaggtggctgagctggtgaaagagctgcggtgggagctggatcagctcttagaggag
aagatcagaaatcccagcatggatctgatcagctgtcctcgagggtctcgcatcatacac
accatagtgtcgctcatctccacacagtag
DBGET
integrated database retrieval system
