Sinocyclocheilus rhinocerous: 107727446
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Entry
107727446 CDS
T04916
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107727446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107727446
03036 Chromosome and associated proteins [BR:
srx03036
]
107727446
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107727446
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
107727446
Chromatin remodeling factors
BAF complex
107727446
PBAF complex
107727446
GBAF(ncBAF) complex
107727446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
107727446
NCBI-ProteinID:
XP_016392804
LinkDB
All DBs
Position
Unknown
AA seq
1578 aa
AA seq
DB search
MSTPNEPPVGIPHAGPSPGAALSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHAMQG
QGAGDYSQDIHPMHKPMEGMHEKGMGEDMHYGQMKGVGMRSLHSGMGPPQSPMDQHSQGY
MSPHPSPMGQVPEHVPSPMSGGGPTPPQMSQGQSPMMPMDPQGMVQQARGQSAFSPVQLQ
QLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQPVNTGPYNRPLGMPMTHGGPAT
GPCPSPVMQTHTQSSGPKPWPEGQGSETPGAQQKLLAPAPSGRPSPAPLLAPTGTQPVPS
TSLTSQPQPPPGPGQPSLIIQLQQKQNRITPIQKPQGLDPVELLQEREYRLQARIAHRIQ
ELENLPGSLPPDLRTKATVELKALRLLNFQRQLRLDVVACMRRDTTLETALNSKAYKRSK
RQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKIQKLSKA
IATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVAN
LTELVYEHRAAQAAKEKKRKRKKKKKETGDAEGMGAIGPDGELIDENSQMSELPVKVIQT
ETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEEEDDEEVVSRAESEEKK
VIDPNSDEVSETAAKHIIESAKQDVDDEYSVQAGQTSSQSYYGVAHTVIERVDKQSTLLI
NGTLKHYQVQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV
PLSTLSNWVNELDKWAPSIVKIAYKGTPSMRRSLVPQLRSGKFNVLITTYEYIIKDKHIL
AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP
TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE
KVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPY
MFQHIEESFAEHLGYPNGIISGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTTLMT
IMEDYFAFRNFLYLRLDGTTKCEDRAMLLKKFNEEGSQFFIFLLSTRAGGLGLNLQAADT
VVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ
AGMFDQKSSSHERRAFLQAILEHEEQNEEEDEIPDDETLNQMIARNEDEFELFMRMDLDR
RREDARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEDDEKIFGRGSRHRRDVDYSDTL
TEKQWLRAVEDGNLEEIEEEIRLKRRKRSRHVDKDLRREDGDKAKKRRGRPPAEKFSPNP
PKLMKQMNAIIDTVINYRDASGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERVRS
HKYRGVSDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKLAREESDDDSNDD
DDDDDEESEEESKSVKVKIRQSNRDERCQDKGKKRSSRGKAKPVVSDDDSEEEQEENFKR
EMSSQRGATVTMSEEEMS
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccccaacgaaccaccggttgggataccccatgctggtccctcaccaggtgct
gccctgtctccggggcccatcctagggcccagccctggacccggcccctctcctggctct
gtacacagcatgatgggtcccagtccagggcccccaagtgtcccgcatgctatgcagggc
caaggggctggagactattcacaggacatccacccaatgcataagcctatggagggaatg
catgagaaggggatgggagaggatatgcactatggacaaatgaagggggtgggcatgaga
tccctgcacagtggcatgggtcctccacagagccctatggatcaacacagtcaaggctac
atgtcccctcatccctcgccaatgggccaggtgccagagcatgtgcctagccctatgtca
ggaggagggccgaccccaccgcaaatgtctcagggtcagtcacccatgatgcccatggat
ccacaggggatggtacagcaagccaggggtcagtctgccttcagcccagttcagctacag
caactcagggctcagatcctggcgtacaagatcctgggccggggtcagcctctgcctgaa
aatctgcagttagcagtgcagggcaagaggagcctccccaccatgcagcagcagcccgtc
aacactggcccctacaacagacctctaggtatgccaatgactcatggagggcctgcaaca
ggcccatgtccctctccagtaatgcagactcatacccagagctctgggccaaaaccatgg
cctgaaggtcaaggttcagagacccccggcgctcaacagaagttgttggccccagctccc
agtggcagaccctctccagctcccctgctggcccccactggcacacaacctgtgcccagc
acctccctcacctcccaacctcagccaccaccaggaccaggccagccctccctcatcatc
cagcttcagcagaaacagaatcgcatcacaccaattcaaaagcctcagggtctggaccct
gttgaactcttgcaagagagggaataccgtcttcaggccaggattgctcacagaattcag
gagctggagaatctgccagggtcactgccacctgatctgcggactaaagctactgtggag
ctgaaggccttaagactgcttaacttccagcggcagctgaggctagatgttgtagcctgc
atgcgccgagacacaactctagagacggccctgaactccaaagcctacaagcgcagcaag
agacagacgctgcgagaggcacgcatgacagagaaactagagaagcagcagaagatcgag
caggaaaggaagcgcagacagaaacaccaggagtatctcaacagcattctgcagcatgct
aaagatttcaaggaatatcacaggtccatctctggaaaaatccaaaagctgtctaaagcc
atcgccacatggcacaccaacacagagagagagcagaagaaggagacggaaagaatcgag
aaagagaggatgaggagactgatggctgaggatgaagaaggttacaggaagctaattgat
caaaagaaggacaagcgcctggcctaccttcttcaacagacagatgaatacgtggccaac
ctgactgagcttgtctatgagcacagggctgctcaggctgccaaggagaagaagaggaag
agaaagaagaagaagaaggaaactggggatgctgaaggaatgggagccatcgggcctgat
ggagagctcatagatgagaacagtcagatgagtgagctgccagtcaaagtcattcagaca
gagacggggaaagtgctacaggggacagatgcccccaagtccagtcagttagaggcctgg
ctcgagatgaaccctggatatgaagttgctccacggtcagacagtgaagagagtggctcg
gaatttgaagaggaggatgatgaagaggtggtctccagagctgaatcggaagaaaagaaa
gtcatcgatcccaacagtgatgaagtatctgaaacagcagccaagcacatcatagagtct
gctaaacaggatgtggatgatgagtacagtgttcaggcgggacagaccagctcccagtct
tactatggagtggcccacacggtcatagagagggtggataaacagtccaccctactgatc
aatgggaccctcaaacattaccaggtccagggtctggaatggatggtgtctttgtacaac
aacaacctgaatggtattctggccgatgagatgggactggggaagaccattcagactatt
gcacttatcacttatctgatggaacacaagaggctcaacgggccgtacctcatcatcgta
ccgctctcgactttgtccaactgggttaatgagctggacaagtgggcaccaagtattgtg
aaaattgcctacaagggcacaccatcaatgcggaggtctttggtgccgcagcttcgcagt
gggaagtttaatgtccttataaccacctacgagtacatcatcaaagacaagcacattctc
gccaagattcgctggaagtatatgattgtggatgagggccaccgcatgaagaaccatcac
tgcaaactcacacaggtgttgaacacccactacgtcgctcctaggaggctgttactcact
ggaacccctctgcagaacaaattgcccgagctctgggccctgctcaacttcctgttgccc
accatcttcaaaagctgcagcacctttgagcagtggttcaatgctccatttgcaatgaca
ggagagagggtggatcttaatgaagaggagaccatccttatcattcgtcgtttgcataag
gtgttacgtcccttccttttacgcagactgaagaaagaggtggagtctcagttacctgag
aaggtggagtatgtcatcaaatgtgacatgtcagccatccagaaggttctgtacaggcac
atgcagggcaaaggcatcctgctcactgatggctcggagaaagacaagaagggtaaagga
ggagccaagaccttaatgaacaccataatgcagctgaagaagatctgtaaccatccctac
atgttccagcacattgaggaatcttttgctgagcacttgggatatccaaatggcattatc
agcggccctgacctgtaccgcgcttctggcaagtttgaattactggaccgcatcctgccc
aagctgaaggccaccaatcacagagtgcttctgttctgtcagatgaccaccctcatgacc
atcatggaggattatttcgccttccgtaacttcctctatctgcgtctggatggaactacg
aagtgtgaggatcgtgcaatgcttttaaagaaattcaatgaagaaggctcacagtttttc
atcttcctgctgagcaccagggcaggaggtctgggcctcaacttgcaagctgcagacacc
gttgtgatctttgacagcgactggaacccccaccaggacttgcaggctcaggatcgagcc
catcgtatcggccagcagaacgaagtacgcgtattgcgtctgtgcactgttaacagtgtg
gaggagaagattttagcggcggccaagtataaactgaatgttgatcagaaagtcattcag
gcaggcatgtttgatcagaagtcctccagccatgagcgcagagccttcctgcaggctatt
ctggagcacgaggaacagaatgaggaggaagatgaaattccagatgatgaaactctcaat
caaatgattgctcgaaatgaggacgaatttgagctcttcatgcgcatggatttagatcgt
cgtcgagaggatgcgcgcaaccctaaacgtaaacctcggctaatggaggaagatgagttg
ccatcatggatcctgaaggatgatgctgaggtggagcggcttacctgcgaagaggacgat
gaaaagattttcggtcgtggatcacgtcaccgcagagatgtcgactacagtgacacattg
acggaaaagcagtggctaagggctgtagaggatggcaacctggaggaaatcgaagaggaa
atacggctgaagaggcgcaagcgtagcagacacgtggacaaagacctgaggcgtgaggac
ggagacaaggccaagaaaagaagaggacgtcctccagcagagaagttttccccaaaccca
cccaaactgatgaaacagatgaatgccatcattgatacagtcatcaattacagagatgca
tcaggccgtcagctcagcgaggtctttgtgcagctgccctccaggaaagagctccctgaa
tactatgaactgataaggaagccagtggacttcaagaagatcaaggagcgtgtgcgcagc
cacaagtacaggggtgtgagcgatctggagaaagacgtcatgcttctttgtcacaacgct
cagacttataatctagagggctctcagatctatgaggactccattgttctccagtcagta
ttcaagagtgcaagacaaaagcttgctagggaggaaagcgatgatgacagcaatgatgat
gatgatgatgatgacgaggaatcagaggaagaatctaaatcagtgaaggtgaaaattagg
cagagtaatcgggacgagagatgtcaggacaaaggcaagaagagatcaagtcgtggaaag
gccaagcccgtggtcagtgatgatgacagcgaggaagaacaggaggagaacttcaagagg
gaaatgagcagtcagaggggagccacagtgacgatgagtgaggaggagatgagctga
DBGET
integrated database retrieval system
