Sinocyclocheilus rhinocerous: 107727633
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Entry
107727633 CDS
T04916
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107727633 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107727633 (trim54)
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107727633 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-RING_6
Sina_RING
zf-C3HC4_3
CYP38_PsbQ-like
SpoIISA_toxin
EFR3_ARM
Motif
Other DBs
NCBI-GeneID:
107727633
NCBI-ProteinID:
XP_016393053
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MNFTLDFKPAMGDSSSVENLEKQLICPVCLEIFTKPVVILPCQHNLCRKCANDVYQASNP
LWQNRGPVSTGGRFRCPSCRHEVLLNRHGVYGLQRNLLVENIIDIYKSESTRPLLPKTEQ
QQLMCDQHEEEKINIYCLACETPTCSMCKVFGAHKDCDVAPLPDIYKRQKTELSDAIAIL
VAGNDRTQALISQMEDICRTVKENGHRQMQYISDKFDELYAILEDRKRELIETVGREQDQ
KLGHVRSLIRRHGDHLEMSVKLVETAIQSMEEPQMAVFLQSAKEVFKKITDTAKASNIER
TEAGYESMAHFIINTEDVADTLRGINFQTGEDGEDSGDEAPEDLTTSPGQTGESGRRI
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcactttggacttcaaaccagcgatgggagactcaagttcagtggagaactta
gagaaacagctcatttgcccagtctgtctggagatattcaccaagcctgtggtcatctta
ccctgccagcataatctctgcaggaagtgtgccaatgatgtttaccaggcctccaaccct
ctttggcaaaaccggggccctgtgtctacagggggacgtttccgctgcccatcttgtcgt
cacgaggtgttattgaaccggcacggtgtatatggccttcagaggaacctgctagtggag
aatatcattgatatctacaaatcagagtctaccaggccactcctgcccaaaacagagcaa
cagcagctgatgtgtgaccagcatgaggaggagaagatcaacatctactgcctcgcctgt
gagacaccaacatgctccatgtgcaaagtgttcggggctcacaaggactgtgatgtggcc
ccgctgccagacatctacaagagacagaagacagagctaagtgatgccatagccatcttg
gtggccggaaatgacagaacacaggccctgatctcacagatggaggatatttgtaggaca
gtcaaggaaaatggtcaccggcagatgcagtacatctctgataagtttgatgaactttac
gccatcctagaagaccgcaaaagagaactaatagagactgtcggccgtgagcaggaccaa
aaactgggccatgtgcgctcccttatccgtcgccatggagatcacttggagatgtccgtc
aaacttgtagagacagccatccagtccatggaagaacctcaaatggctgtgttcctgcag
agcgcaaaagaagtgttcaagaagatcacagacactgccaaggcttccaacattgagcgg
acggaggcgggctacgagagcatggcccacttcatcatcaacacagaggatgtagccgac
acgctgagaggcatcaacttccaaacaggtgaagatggggaagacagcggtgatgaagcc
cctgaagacctgaccacctcgcctggtcagactggtgaatcagggagacgcatataa
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integrated database retrieval system
