Sinocyclocheilus rhinocerous: 107727659
Help
Entry
107727659 CDS
T04916
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107727659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srx03036
]
107727659
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
107727659
REST complex
107727659
Heterochromatin formation proteins
Other heterochromatin formation proteins
107727659
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
107727659
NCBI-ProteinID:
XP_016393097
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MRRRLEDQEPVFTPQQRRLPGSAEGFQHRVLAPAPAVFEAVADSMQPTPGIQFPVPQAYQ
VSTVAQSSSGHGHTPSPAVAHSGAHHHGPAAVQAHGPAPVQGHSHPPTPSASAQGQQQFQ
RLKVEDALSYLDQVKLQFGNQPHVYNDFLDIMKEFKSQCIDTPGVISRVSQLFKGHPDLI
MGFNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPTRPPPPPPQLQNQIPTN
PPSLASTPPVQPTPKSKPLQSPALTPSSHPNPSIPPYASPRSPPLQPHTPVNSMPTTPPL
QNNQPVEFNHAISYVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAGGSYTPALTEQ
EVYAEVAQLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRNDHGGTAKKPQLNNK
QRPNQNGCQIRKHSTTAVTPPVKKKLKLMNIKDSSVAESGKHGGGTESLFFDKVRKALRS
ADAYDNFLQCLIIFNEEIISRAELVQLVVPFLGKFPELFTWFKNFLGYKEMSHLERYPKE
RATEGIAMEIDYASCKRLGSSYRALPKSYQLPKCTGRTSLCKEVLNDTWVSFPSWSEDST
FVSSKKTPYEEHMYRCEDERFELDVVLETNLATIRVLEAVQKKLSRMSAEEQVKFRLDNT
LGGCSEIIHRKAIQRIYGDKALDIIDGLKKNPAVSVPIVLKRLKLKEEEWREAQRGFNKI
WREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNDIESIFDENLLDGNMEASQYEDSLR
EMFTIHAYIAFTMDKLIQNIVRQLQHIVSEEICVQVIELYLSESSHSATGGSLLTQSSRA
PAEVSYQRKAEQLMSDENCFKLMFMKNRGNVQLTMELLDTEEENSDGPMEIECWSDYVVR
YLSADFTSPDLREHLSQKPVFLPRNLRQIRKCQHSHESQEKEVKDSGRKENADSMKMECM
FKLNSYKMVYVFKSEDYMYRRTALLRAHQSHERVSTRLHQRFHAWTQLWVKEHVTRDMAA
ETSRWLMGEGREGLVPCSTTCDPQILHFQRINKYRVQYGSAHKSP
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggcgtttagaggatcaggagccagtgttcaccccacaacagcgccggcttcct
ggcagcgccgagggcttccagcacagggttcttgccccagcgcctgccgtattcgaggct
gtggctgacagcatgcagcctactcccggaatacagttcccggttccccaggcataccag
gtgtccacagtggcccaaagctcaagtggtcacggtcacacacccagtccggcggtggcc
cacagtggtgctcaccatcatggtccggcagcggtccaggcccacggtcctgcgccggtg
cagggccacagtcacccgcccaccccctccgcatctgcacaggggcaacagcagttccag
agactcaaggtggaggacgccctgtcttacctggaccaggtgaagctacagtttggcaat
caaccacacgtctacaatgatttcttggatatcatgaaagagtttaaatctcagtgtatt
gacaccccgggtgtaatcagcagggtgtcgcagctctttaagggtcaccctgatctcatt
atggggtttaacacgtttcttccaccgggatacaagattgaagttcagaccaatgacctg
gttaatgtgactacacccggtcagatccaccacataacacctcacggcatctccgtgcag
aacatccccaccagaccaccgccgccgccgccacagctccagaaccagatccccacaaac
cctcccagcctggcatccacacctcccgtccaacccacaccgaaaagcaagccactgcag
tctccagctctgactccgagcagtcatcccaatccgtccatccctccgtatgcttcccca
cgttcgcccccactgcagccccacacccccgtcaacagcatgcccaccaccccgccgctg
cagaacaaccagcccgtggagttcaaccacgccatcagctacgtcaacaagattaagaac
cgcttccagggccagcctaacatctacaaatccttcctcgagatcctgcacaagtaccag
aaggagcagcgtaatgctaaagaagcgggcgggagttacaccccagccctgaccgagcag
gaagtttacgctgaggtggcccaactcttcaaaaaccaggaagatctgctctctgagttt
ggacagttcctgccggacgccaacagctctgtgctgctgagcaagacgacagcagagaag
gccgaatctgtgcgtaacgatcacggtggaacggccaagaaaccacagctcaataacaag
cagaggcccaatcagaacggctgccagatacgcaagcactcgactacagccgtcacccca
cctgtgaagaaaaagctcaagttaatgaatatcaaagattcatccgtggcagaatctggc
aaacatggtggaggaacagagtctcttttctttgacaaagtgcggaaagctttacgaagt
gctgatgcatatgacaactttctccagtgcctgatcatttttaacgaagagatcatttct
cgtgctgagctggttcaacttgtggttccattcttgggcaaatttcctgagctgttcact
tggtttaagaacttccttggatataaggagatgtcacacctggagaggtacccaaaagaa
agagccactgaaggaattgccatggaaattgactacgcttcatgcaagcgtctgggctct
agttatcgagctttacccaagagctaccagcttcccaaatgcacaggaagaacatcactc
tgtaaagaggtgctgaatgatacctgggtttccttcccctcctggtctgaggactcgacc
ttcgtcagctctaagaagactccgtatgaagagcacatgtacaggtgtgaggacgagcga
ttcgagctggatgtcgtcttggaaaccaacctggccaccattcgtgtgctggaggcggtt
cagaagaagctgtctcggatgtctgcggaagagcaggtgaaattccgactggacaacact
ctgggcggctgctcggagatcatccacaggaaagccatccagaggatatatggagacaaa
gctctggacatcatcgacggactgaagaagaatccggcagtgtctgttcccattgtactc
aagaggctaaagctgaaggaggaagagtggcgtgaagctcaaaggggttttaacaagatc
tggagagagcagaatgagaaatactacctaaaatctctggaccatcaaggcattaacttc
aaacagaacgacactaaggtgctgcgctcgaaaacgcttctcaacgacatcgagagcatc
tttgatgagaatctgctggatgggaatatggaggcgtctcagtacgaggattcgctccga
gagatgttcaccattcacgcctatatcgccttcaccatggacaagctcatccagaacata
gtcagacagctccagcacatagtgagtgaggagatctgtgttcaggtcatagaactgtac
ctgagtgagagcagccactcggccacaggtggatctctgctcacacagagcagcagggca
ccggcagaagtgtcttaccagcgcaaagccgagcagctcatgtccgacgagaactgcttt
aagttgatgtttatgaagaaccgagggaatgttcagctcaccatggagctgctggacaca
gaggaggagaactcagacgggccaatggagatcgagtgctggtcggattacgttgtgcgg
tatctgtcggctgatttcacatctccagacctgagggagcatctgtctcaaaaacctgtg
tttctgccaaggaacctgcggcagatccgtaagtgtcagcatagccacgagtctcaggaa
aaggaggtgaaggacagcggcagaaaagagaacgcagacagcatgaagatggagtgcatg
ttcaaactcaactcctataagatggtgtacgtcttcaaatccgaagactacatgtacaga
cgcaccgcgctgctgagagcccaccagtctcacgagcgagtgagcacacgtctgcaccag
cgctttcacgcctggactcagctctgggtgaaggagcacgtaaccagagacatggctgct
gaaaccagcaggtggctcatgggagaagggcgggagggactggtgccctgctccaccacc
tgtgacccccagatccttcacttccagcgcattaataagtacagggtccagtacggcagc
gcccacaagagcccgtga
DBGET
integrated database retrieval system
