Sinocyclocheilus rhinocerous: 107727761
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Entry
107727761 CDS
T04916
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107727761
Spliceosome [BR:
srx03041
]
Common components
Common spliceosomal components
General mRNP proteins
107727761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
RRM_occluded
PRP38_assoc
RSRP
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
107727761
NCBI-ProteinID:
XP_016393227
UniProt:
A0A673H8J1
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MADDLDIEAMLEAPYKKDDSKSLSTNGHEERSKKKKKSKSRSRSRSREKKRSRSRDRKRS
HDRRRSRSKDRKHSRSKERRRSRSRSRERGGRYRAPFSGLKFNGGPRGKTGPPPAIKLSR
RRSKSRSPFKKDKSPIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDV
RIISDRNSRRSKGIAYIEFVNATSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNL
QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFADAE
CAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMAR
LAEGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNLNVPPNQALNLPSQPIATHC
FQLSNMFNPNSENDPGWEVEIQDDVIEECNKHGGVIHVYVDKKSAEGNVYVKCPSIPAAM
AAVSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatttggacattgaagcaatgttggaggctccttataaaaaggatgacagc
aagtccttaagtaccaatggccatgaggagcggagcaagaaaaaaaagaagagcaaaagt
cggagcagaagccgcagccgggaaaagaagagaagcaggagtcgcgatcgcaagaggagt
cacgaccgcaggaggagccgcagcaaagatcggaagcacagccgcagcaaggagagacgc
cgcagccgttccaggagcagggagcgtggtggtcgctacagagctccattttctggcctg
aaatttaacggtggtcccagggggaagactggcccaccacctgccatcaaactaagccgt
agaaggtctaaaagccgcagtcctttcaagaaagacaaaagccctataagacagcccatt
gataatctcactcccgaagaaagagatgcacgcacagtgttctgcatgcagctggcagca
agaatccgaccacgagacctggaagaattcttttctgcagtgggaaaagtgcgagatgtg
agaatcatctccgatagaaactccagaagatccaaaggaattgcatacattgagtttgtg
aatgccacctctgtacctttggcaattggcctttctggtcaaagacttctcggagtacca
atcattgtgcaggcttcacaggctgagaagaacagagcagctgcgttggctaacaactta
cagaagggcagttctggacctatgagactgtatgttggctcattgcattttaacatcaca
gaagacatgctcagaggcatcttcgagccgtttggaaggattgatagtattcaactgatg
atggacagtgaaacaggacgatcaaaaggatatggctttatcacatttgctgatgccgaa
tgtgctaagaaggctctggaacagcttaatggctttgagttggctggcagaccaatgaaa
gtgggacatgtgacggagcgcactgatgcctcaaccgccagctccttcctggacaatgat
gagctggaaaggaccggaattgatctgggaacgactggtagacttcagctgatggccaga
ctggccgagggtactggtctgcagatcccacctgctgctcaacaggcccttcagatgagt
ggctccatggtagccatggctgcagctactgctgctatgaaccctggattgagttttaac
ctcaatgtgcccccgaaccaagctttgaatctaccatcacaaccaattgcaacacactgt
ttccaactgtctaacatgttcaatccaaactcagaaaatgatcctggttgggaagttgag
attcaggatgatgtcattgaagagtgcaacaaacacggtggagtcatacacgtatacgtg
gacaagaaatcagctgaaggtaatgtctacgtgaagtgtcccagcattcctgctgctatg
gctgcagtcagtgcgttacatggacgttggtttggaggtaaaatgatcacagcagcttat
gtccctcttcctacataccacaaccttttcccagagtcagtgcaggcaacacagcttcta
atgcccagtcgtcggtga
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