Sinocyclocheilus rhinocerous: 107727831
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Entry
107727831 CDS
T04916
Name
(RefSeq) host cell factor 1-like
KO
K14966
host cell factor 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03083
Polycomb repressive complex
srx04980
Cobalamin transport and metabolism
srx05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107727831
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
107727831
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107727831
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107727831
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srx03036
]
107727831
03029 Mitochondrial biogenesis [BR:
srx03029
]
107727831
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107727831
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
107727831
HMT complexes
COMPASS/SET1 complex
107727831
MLL-HCF complex
107727831
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
107727831
Mitochondrial biogenesis [BR:
srx03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
107727831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
107727831
NCBI-ProteinID:
XP_016393329
LinkDB
All DBs
Position
Unknown
AA seq
1798 aa
AA seq
DB search
MTSPGSVVLGTSGALLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKPKAPKSGAPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSSVVGWDIPVTYGVLPPPRESHTAVVYTEKATKKSRLVIYGGMSGCRLGDLWTLDIDT
LTWNKPALSGAAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDTLTWETVLMDTLEDNIPRARAGHCAVAINNRLHVWSGRDGYRKAWNNQVCCKDLWYL
ETERPNPPSRVQLVRANTNSLEVSWGAVSTADMYLLQLQKYDIPSATAATSPALNTAPSL
PGNSPKSPAPAAAAPSAQSLPQSGITLVPQAASPTASVLPSTPASPVAASTARGPAILKV
AAPQSGTGTSIVTVRQATQAGKSPVTVTSLPAGVRMVMPTQTTQGSPSSPQMSGMAALAA
AAAATQKIPPSPGATVLNVPAGATIVKTLAVTPGSTTVRVASPVMVSNPATRMLKTAAAQ
VATPTVSSPTTAARPIITVHKSGTVTVAQQAQVMTTVVGGVTKTITLVKSPLSMGGNLLS
SLGKVVSVVQTKPVQTAALMGQASSNPVTQIIQTKGHLPPGTILKLVTSADGKPTTIITT
SQASGTGNKPTILGISGMSPSTTTKPGTTTIFKTIPMSALQQGATGVTSSTGVKSPITII
TKKVMPSGTGTPGRIITAVPKIGTAVGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVSP
VSGVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLARGSLASANATLATPITTLGTIATLSS
QVINATAVPAAQSNQTTVTSTMQPTQVTLITTPSGVEAQPGQDLPVSILASPTSTESGAG
DASGSVTLVCSNPPCETHETGTTNTATTATANMGTGPAGTVQRVCSNPPCETHETGTTNT
ATTASANMGTVQRVCSNPPCETHETGTTNTATTASSNMGTAPAGTVQMVCTNLPCETHET
GTTNTATTASSNMGGNQTGTVQRVCSNPPCETHETGTTNTATTASSNMGGNQTGLPSWVC
SNPPCETHETGTTNTATTASSNMGGNQTGTVQRVCSNPPCETHETGTTSTATTATCSMET
DEETAQQSGEASESTTSTEGLPSTAAPQSRAITIVTQATPLPGPAVPSISSITESSSEAG
AEPVFMESSEAESLQAEGQAEAEAVAMQAEFQTEAGAEAMPSAFQAEAAALPSDFQGEAV
AVAMQAENQVEEGAMPMEHDASSMAEGETAQEQLPTAEMEGVEAASASQAEALALPPELM
LDGQPTMLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMSSGDAGG
DNQQTHTIPIVLTQQELAALVQQQQQLQAAQQQAAAQAALLTEGLAPADSLNDPSSESNG
HSEITAAATRTVVGLLPSTSAETLAPSSTLASAVVASPAKMQAAAALTQVANGIEAAKQN
PPTVTIKPQVKKENQWFDVGIVKVTNMVVTHFYMPADDAAYVEDDSGTIPDYSQMKRVDL
QPGTAYKFRVAGINTCGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVT
SGKITEYSVYLAIQSSQTTEAKPSAPAQLAFMRVYCGPNPSCLVLSSSLSNAHIDYTTKP
AIIFRIAARNEKGYGPATQVRWLQESNKDGLSAKPAPKRAVTSPDTKGIGQKKARMDQ
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccccggttcggttgtgcttggaacctccggagctctgctgcagccgcgatgg
aagcgggttctgggatggtccgggccggttccccgaccgagacacgggcacagagccgta
gctatcaaggagctgatggtcgttttcggcggaggaaacgaagggatcgttgacgagttg
cacgtttataatactgcaacaaaccaatggttcataccagctgttcgtggagacattcct
cccggctgtgcagcttatggttttgtatgtgatggcacacgtctattagtgtttggtgga
atggtggaatatggaaagtacagcaatgacctttatgagttacaggcaagcagatgggaa
tggaaaaaattgaaaccaaaagcccctaaaagtggagccccaccatgtcctcgcctgggc
cacagtttttctcttgtgggcaacaagtgctatctttttggggggcttgccaatgacagt
gaagaccccaagaacaacattcccagatatttgaatgacctttataccctcgagctgcgt
ccaggctccagcgttgtgggctgggatataccggtcacatatggagtgctgcctcctcca
agagagagccacactgctgtagtttatactgaaaaagctactaagaagtcacgtcttgtt
atatatggaggaatgagtggttgccgtttgggagatctttggacattggatattgataca
ctgacctggaacaagcctgcactaagcggcgcagctcccctcccccgtagccttcactca
gccaccactattacaaacaaaatgtatgtttttggtggctgggttcccttagtgatggat
gatgtgaaggtggccacacatgagaaggaatggaagtgtacaaacactctggcctgcctg
aacttggacaccttgacatgggagactgttttgatggacactttggaggacaacatacca
cgtgcacgagcaggacattgcgctgttgctattaacaacagacttcatgtttggagtgga
cgtgatgggtaccgcaaagcttggaacaatcaggtgtgctgcaaagacctgtggtacctg
gagacagagcgacctaatcctccatcacgggtacagcttgtccgggccaacacaaattct
ttggaggttagctggggagcggtgtctacagcagacatgtacctgcttcagcttcagaaa
tatgatatcccatcagccactgctgccacatcaccagccctcaacacagctccctccctc
cctggaaactcgcctaagagtccagcacctgccgcagctgctccgtctgctcagagtctg
ccgcaaagtggcatcaccctcgtgccccaggctgcttctcccacagcctcagttctgccc
agcacacctgcaagtcctgtggctgcctcaacagctcgtggaccagctattctgaaagtt
gcagcccctcagtcaggcaccgggacgtcaattgtcactgtgcgacaggccacccaggcc
ggaaagtccccagtcactgtgacatcacttcctgcaggtgttcgcatggtaatgccaaca
cagaccactcaaggatcgcccagcagccctcagatgagtggaatggcagctttggctgca
gctgctgcagccactcagaaaatccctccttcccctggagccactgttctcaatgtgccg
gctggggccacaattgttaaaacgttggctgtgacacctgggtccaccacagttagagtg
gcatcacctgtcatggtaagcaaccctgccactcgcatgctgaagactgcagctgcacag
gtggccactccaacagtgtccagtcccactacagctgctcggcctatcatcactgtgcac
aagtctggcacagttaccgtagcccagcaggctcaggttatgaccacggtggtgggcgga
gtcaccaagaccatcactcttgtcaagagcccgctttccatgggaggaaacttgctctcc
agcttgggcaaggtggtgtcagtggtacagaccaaaccagtgcagacagctgctttgatg
ggacaggcctcctccaacccagtgactcagattatacagactaagggtcacctcccaccc
ggcaccattctgaagctggtaacatctgcggatggaaaaccaaccaccataattaccacc
agtcaagcaagtggcacaggaaacaagcccactatcttgggcatcagtggcatgtccccc
tctaccaccaccaaaccgggcaccaccactatttttaaaacaatccccatgtctgctcta
cagcagggagctacaggtgtgactagtagtacaggggtgaagagtcctattaccatcatc
accaaaaaggtgatgccgtctggaacaggaactcctggcagaatcattacagcagtgcct
aagattggtacagcagttggccagcaaggcctaacacaggttgttctaaagggagctcct
ggtcagcctggaaccatccttcgcactgtgccgatgggaggagtgcgtctcgtgtctcca
gtatctggggtcaagccaactgtgacaacactagttgtgaagggaacaactggtgtaaca
actcttggcacagtcacaggaacagtttctaccagcttagctagaggaagcttagccagt
gccaacgccaccctggcaactcccatcaccactctgggcacgattgccaccctctccagc
caggtcattaatgctaccgctgtgccagctgctcagagcaaccagaccactgtcacctcc
accatgcagcccacccaggtgactctcataacaacacccagtggtgtggaggctcagcct
ggccaagatctgcctgtttccattctggcctctcccacctctactgagtctggtgcaggc
gacgcttctggcagtgttactttagtgtgctccaacccaccctgtgagactcatgagacg
ggcaccaccaacacggccaccacagcgacggcaaatatgggcactggaccagctggcaca
gtacaaagagtgtgttccaacccaccctgtgaaacgcatgaaacgggtacaacaaacact
gccaccacagcatctgccaacatgggcactgtacagagggtctgctccaacccaccatgt
gagacccatgaaacgggcaccaccaatacagcaaccacagcatcttcaaatatgggcaca
gctcctgctggcactgtccagatggtctgtaccaacctaccctgtgagacccacgagacg
ggcaccaccaacacggcaaccacagcatcatctaacatgggcggaaatcaaacaggaacg
gtacagagggtctgctcaaacccaccttgtgagacccacgagacgggcaccaccaacacg
gcaaccacagcatcatctaacatgggcggaaatcaaacgggtctgccgagctgggtctgc
tcaaacccaccctgtgagacccacgagacgggcaccaccaacacggcaaccacagcatca
tctaacatgggcggaaatcaaacgggaacggtgcagagggtctgctcaaacccaccttgt
gaaactcacgagacgggcaccaccagcacagcaaccactgcaacctgcagtatggagacg
gacgaggaaacagcccaacagagtggtgaggcatcagaatctaccaccagtacggaaggc
ttgccgtccactgcagcgccccagagcagagccattactatagtcacacaggccacacct
ctaccaggacccgctgttccgtccatctcttcaatcacggagtcatcctcagaggccgga
gctgagccggtttttatggagagctcggaggcagagtctttgcaggcagaaggccaggct
gaagcggaggcagttgccatgcaggcagagttccagacagaggcgggggcagaagcaatg
ccaagtgccttccaggcggaggcagccgcattgccgagtgacttccagggagaagccgta
gcggtagccatgcaggcagagaaccaggtggaggaaggggcaatgccaatggaacatgac
gcttctagcatggcagagggagaaaccgctcaggagcagctaccgacagctgagatggag
ggtgtagaggcagcatcagcatcacaggccgaggcgctggccttgccaccagagctgatg
ttggacgggcaacccacaatgctgatggtgacaggtctgaccccagaggagctggccgtc
acggcagccgcagaggcagcggcccaggctgcagcgacagaagaggcccaagccctcgcc
attcaggctgtactacaagcagcacagcaggctgttatgagctcaggtgatgccggagga
gacaaccagcagacccacaccatacccatcgttctgacccagcaggaactagcggcgttg
gttcagcagcaacagcagctccaggcagcccagcagcaagctgctgcccaggccgcactg
ctcactgagggcttggctccagctgacagcctaaatgacccctcctcagaaagcaatgga
cacagcgagatcaccgccgctgccacaagaacagtagtcggactgctgcctagcacctca
gcagagactttggctccatccagcacattagcctctgcagtagttgccagtccagctaag
atgcaggcagctgctgctctgactcaagtggccaatggtattgaggctgcgaagcaaaac
cctcccactgttaccatcaaacctcaagtgaagaaagaaaaccagtggtttgatgttggc
attgtcaaagtgaccaatatggttgtaacacatttctacatgcctgcagatgacgccgct
tatgttgaggatgattctggcacaatccctgactacagccagatgaagagggtggacctt
cagccggggacggcctacaagttccgtgtggcgggtataaacacatgtgggcgtggagcc
ttttctgaaatatctgctttcaagacctgtttaccgggcttcccaggggcaccgtgtgcc
ataaagatcagcaagagtccagacggtgcacaccttacatgggaacctccatccgtgaca
tcaggaaagatcacagagtattctgtctatctggctatccagagcagccagaccactgag
gcgaaaccctcggccccggcccagcttgccttcatgcgtgtttactgtgggccaaatcct
tcctgcctggtcctgtcctctagcctgtccaatgcccacatagactacaccaccaaaccc
gccatcatcttccgcatcgctgcacgcaacgagaaaggttatggcccggctacacaagtg
cgatggctgcaagagtctaacaaagatgggctttctgcaaagcctgccccaaaaagagca
gttacttcaccagatacgaaagggattggtcaaaagaaagcaagaatggaccagtga
DBGET
integrated database retrieval system
