Sinocyclocheilus rhinocerous: 107727856
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Entry
107727856 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107727856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107727856
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107727856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
HTH_Tnp_1_2
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
107727856
NCBI-ProteinID:
XP_016393367
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MPSSLGSSSPAAVLQEALENSSRLIDRHLQEDRCFPDLSELLNIPSHNMPSLSGVSDMDY
PLQGPGLISVPSLPELSAIRRVPLPPELVEQFGHMQCNCMMGVFPEISRAWLTIDNDIFM
WNYEDGSDVAYFDGLSETILSVGLVKPKPGIFQPHIHFLLVLATPVDVVILGLSFPKAHT
DPVVQIAVDNSRNILYTRSEKGVLQVYDLGADGQGMSRVAAMSQSSIVSAAGNIARTIDR
SVFKPIVQIAVIDRPESSDCQLLAVTHAGVRLYFSTIPFAPPNAKHISARPCVLVLVHVR
LPPGFSASSTLQKPAKVHKALYSKGVLLMAASEAEDSDVLWCINHDSFPFKKPLMEAQMT
VNVDGHSWALCSIEETKSPRILTPLNKDLIPVTDSPLVVQQHSVPPQTFVLLSAQGSHIF
HKLRPVDQLRHLLVSSAGGESEEIERFFKLHGEGQACATALILACSSAACDREVSVWATR
AFFRYGGEAQMRFPSAISAPSNVGPLFSSPVPGSPMSVGSPLPNPSFLATPAPGMFPPTV
STPYIPATPMSGMVSSGPEVIFSGKHNGISIYFTRILGNIWDGSLSMETTITKGRQTVTI
ILHFGSPANLQQRLLGFMRPDGSSSQQVQQELQRKYHTEAQAYEKASLQAMQQLVHRSYQ
TLALWKLLCDHQFSLIISEMPKEFQDQIKAVSFKDVVVSGRELSGALITALINVYIKDSA
CVDTVSTHLRDICPLLYSSDDSICQLTPYDWFCSAGSHMLFTYLTVYLHNDNQVESNLIT
SXVRFYEGVVELCLTAADKKDPQKLGLHFYRNGEPEEDSSGQQAFQERLSCYKCITDTMQ
ELVNQSKAAPQSPSVPKQPGPPVMTSDPNMLSNEDAAAHFEQMLGLAQRSQDELFHIALY
NWLIQADLTDKLLEVNSPYLEDHLMHMIKQDQSKVRNMDLLWRYYEKNRSFGKAAHVLAR
LADMHSTEISLKQRLEYISRAILSAKSSSCVSSLGADGEFLHELEEKMEVVRIQVQIQET
LRRQYSQHPSVQGAITQLDSELMDITKLYGEFADHFRLSECKLAIIHCAGHSDPILVHSL
WQEIVEKELSDSVAMSPADRMRALSLKLVSLGKLYAGTPRYFPLDFLVKFLEQEVCRLNW
DVGFVTFTMQEIGVQLPRLLEVYDQLFKTRDPCWQRLKKPLHLVECIHVLLSGYVDDPSR
VPTYDRRRFTNACLDNICGYLVELQSLSPNAALQDIIRNFKYLQAKLEKLH
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccagtctgggctccagcagtccagccgcagttcttcaggaggctttggaaaac
tccagccgcttgattgacaggcatctgcaggaggatcgttgtttcccagacctgtccgag
ctcctcaatatcccgtcacacaatatgccttcgctctcgggcgtgtcggacatggattac
cctctgcagggaccggggctgatcagcgtgccgagtcttcctgagctcagcgccatccgc
agggttcctctgcctccggagctcgtcgagcagttcggtcatatgcagtgcaattgcatg
atgggagttttcccagaaatctccagagcgtggctcaccatcgataatgacatttttatg
tggaattatgaggatgggagtgatgtggcgtattttgacgggctcagtgaaactatactg
tcagttggactggtcaaacctaagccaggtatttttcagcctcacatccacttcctgtta
gtgttggccacaccggtggatgtcgtgatcctgggcttgagcttcccaaaagcccataca
gatcctgttgtccaaattgctgttgataattcaaggaacattttatacacgcgttcggag
aagggcgtcctgcaggtgtatgatctcggcgctgatgggcagggaatgagtcgagtcgct
gctatgtctcagagctccatcgtctcagcggctggaaacatcgccaggacgatcgaccgc
tccgtgttcaaacccattgttcagatcgcagtaattgatcgcccagagtcgtcagactgt
cagctgttggccgtcactcatgctggtgtgcgtctttactttagcaccatcccttttgct
cctccgaacgccaaacacatctcggcccggccctgtgtgctggtgctggtgcatgtgcgt
ctgccacccggattctctgcgtcctccaccctccagaaaccggctaaagttcacaaggct
ctctacagtaaaggagttctgctgatggccgcgtctgaggcagaagacagcgacgttctg
tggtgcatcaaccacgattcctttccctttaaaaagcccctcatggaagctcagatgacg
gtgaatgtggacggtcactcgtgggctctgtgttcaatcgaggaaaccaaatctcccaga
atcctcactcctctcaataaagatctcattccagtcactgactctcctctggtcgttcag
cagcacagcgtcccgccgcagacgtttgttctcctgtccgctcaggggagtcacatcttc
cacaagctgcggccggtggatcagctgcgccacctgctggtgagcagcgctggaggagag
agcgaggagatcgagaggttcttcaagctgcacggggaagggcaggcgtgtgccacggcg
ctcatcttggcctgttcctcagcagcgtgtgatcgagaggtttctgtatgggccacacga
gccttcttcaggtacggtggagaggctcagatgcgtttcccatctgccatttctgccccc
agtaacgtcggcccgctcttcagctcccctgtaccaggatccccaatgtctgtcggcagc
cccctaccaaaccccagttttcttgccacacctgcgccaggcatgttcccgccgaccgtg
tcgacgccttacatcccagcgactcccatgagcggcatggtgtcgtctggacccgaggtc
atcttctctggaaaacacaacggcatcagtatctacttcacgcgtatactggggaacatc
tgggatgggagtctttcgatggagaccaccattaccaaaggcaggcagactgtgactatt
atcttacatttcggctcgccagcaaacctacagcaaaggcttctgggattcatgcggcct
gatggttccagctctcagcaagtgcagcaggagctccagaggaagtaccacacggaggct
caagcgtatgagaaagcgtctcttcaggccatgcagcagttggttcatcgctcctatcag
acgctggcgctctggaagctcctgtgtgaccatcagttcagcctcatcatctctgagatg
cccaaagagtttcaggaccagattaaggctgtgagttttaaggatgtggttgtttctgga
cgcgagctgagtggcgctctcatcaccgccctcattaacgtgtacatcaaagacagcgcg
tgtgtagacaccgtcagcactcacctgagagacatctgccctctgctgtacagcagcgac
gacagcatctgccagctgaccccttatgactggttttgtagtgcagggtcacatatgcta
tttacatacctcactgtatatctgcacaatgacaatcaagttgaatccaatctaatcaca
tctnnagtgcgtttctatgagggagtggtggagctgtgtctcacagccgctgataagaaa
gaccctcagaagctggggctgcacttctacaggaacggagagccggaggaggactccagc
ggccagcaggccttccaggagagactctcctgttataaatgcatcacggacaccatgcag
gagctggtgaaccagagcaaagcggcccctcagtctcccagcgtccctaaacaacccgga
ccccccgtcatgacctctgaccccaacatgctgagcaacgaggacgctgccgctcatttt
gagcagatgctgggtctcgctcagagatctcaagacgagctcttccacatcgctctctat
aactggctcattcaggccgatctcactgacaaactcctggaggtgaactcgccgtacctc
gaggatcatctgatgcacatgatcaaacaggaccagagtaaagtgcgaaacatggacctt
ctgtggcgatactacgagaagaaccgaagctttggcaaagcggcgcatgttctggcgcgg
ctggctgacatgcacagcacggagatctctctgaagcagcgtctggagtacatctccaga
gccatcctctccgccaagagctcgtcctgtgtctcttcactgggagccgacggagagttt
ctgcatgaactggaggaaaagatggaggtggtgcggattcaggtgcagatccaggaaacg
ctccgcagacagtattcccagcatccctcagtgcagggagccattacacaactcgactcc
gagctcatggacattaccaagctgtacggcgagtttgcggatcacttccggctgtcggag
tgtaagctggccatcattcactgcgcggggcattcggaccccatcctggtgcactcgctg
tggcaggagatcgtggagaaggagctgagcgacagtgtggccatgagcccggcggaccgc
atgagagctctgagcctgaagctcgtgtcgctggggaagttatacgcgggaacacctcga
tacttcccattagatttcctggtgaagtttctggaacaggaagtgtgccggttgaactgg
gacgtgggtttcgtcaccttcaccatgcaggagattggagttcagcttccacgactgctg
gaggtttacgaccaactcttcaagacacgggacccatgttggcagcgccttaagaaaccc
ctgcacctggtggagtgcatccatgtgctcctgtcaggatatgtggatgaccccagccga
gtgcccacctatgacagacggaggtttactaacgcttgtctggataacatctgcgggtat
ctggtggagctgcagtccttgagtccaaacgcggctctgcaggacattatacgcaacttt
aaataccttcaggccaaactggagaagctccattga
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