Sinocyclocheilus rhinocerous: 107728253
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Entry
107728253 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107728253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107728253
Membrane trafficking [BR:
srx04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107728253
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
107728253
RAVE complex
107728253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
107728253
NCBI-ProteinID:
XP_016393846
LinkDB
All DBs
Position
Unknown
AA seq
2284 aa
AA seq
DB search
MNLHQVLTGAVNPGENCFSVGSVNNQPFTAYASGCDIVILGSDFERIQIIPGAKHGNIQV
GYFLNLLCFQIAASYGNIICVFEPVEVSPQGKAQNQKLNYHWQKSGQFVLQSAAQILTWH
TTGSWLLTGSACLQMWCDVQSSAETEEEAESAGPRRSWRCVWQCKSAAPTHFIKFSPDGE
FFATAGQDDCLVKVWYSTSKWQADVTKLFTPLDLRSGAEINFSFIYLAHPRSVTGFSWRK
TSKYMPRGTVCNMLLTCCKDSVCRLWAETVLPSDCLLSGLRHNHCSSDAMKANSTKKSSS
STRVQNQNPLELKLKPSWREEVRCLSQLSYSGPLPQQQNKHYSHRTNILHANALCHFHIA
ASINPATDIPLLPSISSMSGSDEEEPGGPFTVHWLNNKELHLTLSMEVFLQQLRSSGEQN
GPTERYDADEEGSGADAAALSSVSLPAAAVDHQVDVLLSDWNRAADMLFSIHPMDGSLLV
WLVGWLDEYQPGMFRQAQVQTTHPESDADEEGSGADAAALSSVSLPAAAVDHQVDVLLSD
WNRAADMLFSIHPMDGSLLVWLVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDAISLSRS
VVMYACNRNVDLAMQHGRQRPAGLPHSSSSALIGQSQNKPSSSSLRLSIFTPSVLMISKH
ADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRT
PDGDAALTRPAAAPSHRSRVSSGGVAQDPNAIYSELILWRVDPVGPLSFSGGVSELARIN
SLHASAFSNVAWLPTLIPSNCLGVYGNSPSACFIASDGHSLRLYQAIIEAKKLLSELSNP
DISKYVGEVFNIISQQSTARPGCIIELDAITDFQGKETQLLHVFEEDLILGNEKTDDYLQ
DSVPSRTLFSARFFLVVVEITQSGRSLLHMWHLQLDAVPVVMEQTQTPDRETVSPSFNFE
TVGSPQTPRPKLKTSNLQSACRLTLSSTKVFSQELDLPQGVEVIRVSPAAGHLSASSLQP
AGRSPYLLATSCSDGSVRFWRCSAVSDPDGSADPSYVWEEWPLLVEEGEASSSALSVSGQ
LMGLSCCHTSRVAVAHRSHEPIMHISIFQCDSTGGSQWILEQTLKVCSAYSPSANDCLSN
GCSVKRQVHLDWVSREDGSHILTVGLGSKLYIYGMLSGTPPDLGLSDCSKERSCSRLVLL
RVVDLVSSVEGSLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPAPVKPSRTGSVTSLNS
AMKQEGLSPNPSKKTLTRSMTSLAQKLSGKRTVYDLPAEMEDSGLFEAAYHLFPTLPQYH
PVQLLELMDLGKVRRAKAILSHLVKCIAGEIVSMKDTAINQERRLRSLTISASGSTARDP
KMFSKAESSDYTEIDSIPPLPLHALLAADEETAPSAKERSESVSAHGQSDAYNELFQTAG
VSADDMDPFDGDEEDANAKVIDLSKYSPTFFGSEHAQVLSGHLLHSSLPGLTRMEQMSLM
ALADTIASTSTHIGESQGKGQSGETLDECGLKFLLAVRLHTFLLTSLPPAHRAPLLCQGL
STCHYAWAFHSEAEEELLNMLPALHKGEPAWPELRAMGMGWWLRSTNKLRRCIEKVAKAA
YQRNNDPLDAALFYLAMKKKAVVWGLYRSHHNVKMTAFFSNNFSEDRWRKAALKNAFSLL
GKQRFQHSAAFFLLAGSLKDAVEVCIEKMQDLQLALVVCRLYESEFEMSCSYKRILQRHV
LGQDHQIAAHQDPFLRSMAYWVLDDYSRALDTLLEPNADTSHEAFARVNHHCVSHQDDSL
QISAPAPQHLSVPLFLAWTASSKTVVANPIVHLTNLTHDILHTINALDAPPHPDVVSNEI
YVMHTLAASLSACIYQCLCDGHSYSHVNPFTGITYQSVLLTHQPPVRSVSIEEAILPNTS
PAQWPGVSVLMRLLSASGDENQPGLPVLLCEILTAVFLSLFVHGLATHSSHELFRIVAHP
LNSRLWVSVFGGGACVPVLKKPSSPTVEDVERKQRRSRLSSSRSNSRDVPDSPRPVAMEP
DTSVCKERFVPPELSIWDYFIAKPYLPPSASRVEYDSEESQGSEDEEDDDEGDPSSPLAE
HSSNSSYSWCLMRLAMVQTVLVNLKTFYPMAGHDLLGNEIXCVCVXSVKCRAHPERWLQR
WEQLLLKRLEISGGPPSRFICTQLLEESVSSGPALLRHKALFEPSNTPFRSRRRSALPVR
RLWQYLVKQEEVQEMFIRNIFTKKRDPNEVLVSVHQQLLVCTPPDCVLTATPLCRVINMM
LHLC
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctcacaggagccgtcaaccctggagaaaactgcttctctgtg
ggcagcgtcaacaaccagcccttcacggcgtacgcctctggctgtgacatcgtcattctg
gggagtgactttgaaaggatccagatcatcccaggagccaaacacgggaacatccaggtg
ggctactttctaaatctgctctgttttcagatcgcagcgtcatacggaaacattatttgt
gtgtttgagccggtggaggtcagtccacaagggaaagcacaaaaccagaaactgaattat
cattggcagaagagcgggcagtttgttctgcagtcggccgcacagatcctgacgtggcac
accacaggttcatggcttctgacgggctcggcgtgtctgcagatgtggtgtgatgttcag
tccagtgcagagactgaagaggaggctgaatccgccggtcctcggcgctcctggagatgc
gtatggcaatgcaagtccgctgctccgactcacttcatcaagttttccccagatggagag
tttttcgcgaccgcaggacaggacgactgtctggtgaaggtgtggtacagcaccagtaaa
tggcaagcagacgtcaccaaactcttcacgccgctcgacctgcgctccggagccgagatc
aacttctccttcatttacctggctcaccctcgctccgtcaccggcttctcctggaggaag
accagcaaatacatgcccagaggcaccgtgtgtaacatgctgctgacctgctgcaaggac
agtgtgtgtcgcctgtgggccgaaacagtgcttcccagcgactgcctgctgtctggactc
agacacaatcactgcagcagcgacgccatgaaggcaaacagcacgaagaagtcctccagc
agcacccgagtgcagaaccagaacccgctggagctgaagctgaagccgtcgtggagagag
gaggtgcggtgtttatctcagctctcatacagcggtcctctgccccagcagcagaacaaa
cactacagccaccgcacaaacatcctgcacgctaacgcactgtgccacttccacatcgcc
gccagcatcaacccagccacagacatccctctgctgccctccatctcgtccatgagcggc
tctgatgaggaggaaccgggcggcccgttcaccgttcactggctcaacaacaaagagctg
cacctgacgctgagcatggaggtgtttctacagcagctgaggagcagcggcgagcaaaac
ggacccacagagcgctacgatgctgatgaggaggggagcggcgctgatgctgcggctctg
agctccgtctctctccctgcggcggctgtggatcatcaggtggatgtgctgctgagtgac
tggaacagagcagcagacatgctgttcagcatccaccccatggacggctcgctgctggtg
tggctagtcggctggctggatgaataccagccgggcatgttccgacaggcgcaggtacaa
acaacacatcctgagagcgatgctgatgaggaggggagcggcgctgatgctgcggctctg
agctccgtctctctccctgcggcggctgtggatcatcaggtggatgtgctgctgagtgac
tggaacagagcagcagacatgctgttcagcatccaccccatggacggctcgctgctggtg
tggctagtcgactggctggatgaataccagccgggcatgttccgacaggcgcaggtttcc
ttcgtgtccaggattcccgtggccttccccaccggcgacgccatctcgctcagccgcagc
gtggtcatgtacgcctgcaacagaaacgtggacctggccatgcagcacggccgtcagcgt
cccgcgggcctgccgcactcgtcctcctccgctctgatcggacagagccagaacaaaccc
tcctccagcagcctgcgtctcagcatcttcacccccagtgtcctgatgatctccaaacac
gccgacggctcactcaaccagtgggccgtcagcttcgccgaggactcggccttctccacg
gtgctcagcgtgtctcataagtcacgatactgcggccaccgcttccacctcaacgatcta
gcctgccactctctgctgccgctgctgctcactacctcgcaccacaatgccctgaggaca
cccgacggggacgccgctctgacccgccccgccgccgccccgtcccacaggagcagggtg
tcttctggtggcgtcgcccaggatcccaacgcgatctacagtgagctgatcctgtggcgg
gtggatccggtgggtccgctgtcgttctcggggggcgtgtcggagctggccaggatcaac
tcgctgcacgcgtccgccttctctaacgtggcctggctgcccacgctcatccccagcaac
tgcctcggtgtgtatggaaactcacccagtgcctgcttcatcgctagtgacggacactcg
ctccgactctatcaggccatcatcgaggccaaaaaactgctgagtgaactctccaacccc
gacatctccaaatatgttggagaggtgtttaacatcatcagccagcagtcgacggccaga
ccaggctgcatcattgagcttgatgccatcacagactttcaggggaaagagacgcagctg
ctgcatgtgtttgaggaggacctgatcttgggaaatgagaaaacagacgattacctgcag
gattctgttcccagccggacgctcttctccgctcgcttcttcctggtggtggtggagatc
actcagagcggcaggtcgctcctgcacatgtggcacctacagctggacgcagttcccgtc
gttatggagcaaactcaaactccagacagagagactgtgtctccatcatttaactttgag
acggtcggctcaccacaaaccccgagacccaaactgaagacgtctaacctccagagcgcc
tgccgcctcactctttccagcacgaaagtcttcagccaggagctggatctgccgcagggc
gttgaagtcattcgtgtatcacctgctgcaggtcatttgagcgcttcatctctgcagccg
gccggccgctctccgtatctgctggccacgtcttgctcagacggatcggtccggttctgg
aggtgcagcgccgtctctgaccccgatggctctgcggacccgtcatacgtctgggaggag
tggcctttgcttgtggaggagggcgaggccagcagcagcgctctgagcgtgtccggtcag
ctcatgggtctcagctgctgtcacaccagcagagtcgcagtcgcgcaccggagccacgaa
cccatcatgcacatcagcatcttccagtgcgactccaccggaggctctcagtggattctg
gagcagacgcttaaagtctgcagcgcatacagccccagtgccaacgactgcctgagtaac
ggctgttcagttaagaggcaggtccacttagactgggtttccagagaagatggctctcac
atattaactgtaggtctaggatccaaactttacatttacgggatgctttctggaacacct
ccagatctgggtctgtccgattgcagtaaggagcgcagctgctctcgattggtgctcctc
cgagtggtggatctggtgtcgtcggttgaaggttcgctacccatccctgtctctctatct
tgggtgcgagatggcatcttagtagtcgggatggattgcgaaatgcacgtctactcccag
tggcagccgccggctccagtcaaaccgtcgcgcactggtagcgtgacgtcgctcaactct
gcgatgaagcaggagggactcagtccgaatccttcgaaaaagaccctcaccagatccatg
actagtttggctcagaaactcagtggaaagagaaccgtgtacgacctcccggccgagatg
gaggattctgggttgtttgaggcggcctatcacctgtttcctactctgccccagtatcac
ccagtgcagctgttggagctcatggacctcgggaaggtgcgccgggccaaagccatcctg
tcccatctggtgaagtgcattgctggggagatcgtgtctatgaaggacactgcgataaac
caggagcggcgtctgcgctcgctcaccatcagcgccagcggaagcaccgcccgagaccca
aagatgttcagcaaagctgagagctccgactacaccgagatcgactccatcccgccgctg
cctctgcatgcgctgttagccgccgacgaggagaccgctcctagtgccaaagaacgatcg
gagagcgtgagcgctcacggccaaagcgacgcttacaacgagctcttccagaccgccggt
gtcagtgcggatgacatggacccttttgatggagatgaggaggatgcaaacgctaaagtc
attgatttgtcaaagtacagccctacgttcttcggctccgaacatgcacaggtgttatcg
ggacacctgcttcactccagcctgccgggcctgacgcggatggagcagatgtctctgatg
gctctggcggacaccatcgcttccaccagcacccacattggagaaagccaaggcaaaggc
caaagtggagagacgctggatgaatgtggactgaagttcctgctagccgttcgcttgcac
accttcctcctcacgtctctgcctccggctcatcgcgctccgctgctctgtcaaggactg
tccacctgccactacgcctgggcgttccactccgaggccgaagaggagctgctcaacatg
cttccggccctgcataaaggagagcccgcgtggcccgagctgagagccatgggcatgggc
tggtggctcaggagcaccaacaagcttcgcagatgcattgagaaggtagcaaaagctgct
tatcagagaaacaacgacccgttagacgcagccttgttttatctggccatgaagaagaaa
gctgtggtctggggactgtacaggtcccaccataacgtgaagatgacagcattcttcagc
aataacttcagtgaagaccgctggaggaaggcagcgctgaagaacgctttctctctgctc
ggaaagcaacgtttccagcattcagcggctttctttctgctggccggatccctgaaagat
gctgttgaggtttgtatagagaagatgcaggaccttcagctggctctggtggtctgtcgg
ctgtatgagtctgagttcgagatgtcctgcagctacaagcgaatcctgcagaggcatgtg
ttgggtcaggatcaccagatcgcggcccatcaggacccgttcttacgcagcatggcgtac
tgggtcttagatgactacagcagggctttggacacgctgctggagcccaatgcagacacg
tcacatgaagcatttgcccgtgtgaatcatcattgtgtttctcatcaggacgacagtctg
cagatctctgctcccgctccgcagcacctgtctgttcctcttttccttgcgtggaccgcc
agctccaaaacagtggtggccaatcccatagtgcacctgaccaacctcacgcacgacata
ctgcacaccatcaacgctctggacgcgcctccgcacccggatgtcgtcagcaacgagatc
tacgtgatgcacacgctagcggcttccctgtcggcctgcatctatcagtgtctctgtgac
ggacacagctacagccatgtgaatccgttcacgggcatcacctaccagagcgtcctgctt
acccatcagcccccggtgaggagcgtcagcatcgaggaggccatcctgcccaacacctct
cctgcgcagtggcctggtgtgagcgtcctgatgcggctgctgagcgcgtccggagacgag
aaccagcccggtctgcctgtgctcctgtgtgagatcctgaccgcagtcttcctcagcctc
ttcgtccacggtctggccactcactccagccacgagctcttccgcatcgtcgctcacccg
ctcaacagcaggctgtgggtgtctgtgttcggcggcggcgcttgtgttcctgtgctgaag
aaacccagctcacccacagtggaagatgtggagaggaagcagcggcgttcccggctgagc
tcatcacgcagtaactccagagacgttcccgacagtcccagacccgtggcgatggagccg
gacacatccgtctgtaaagagcgtttcgtgccgcctgagctcagcatctgggattatttc
atcgcaaagccgtacctgcctccgtctgccagccgagtggagtacgactctgaggagagc
cagggcagtgaggacgaggaggatgatgacgaaggagatcccagctctccgctggcagag
cattccagcaatagctcgtacagctggtgtctgatgcgcttggccatggtgcagaccgtc
ctggtcaacctcaagaccttctacccaatggcaggtcacgacctcttaggtaacgagata
tgatgtgtgtgtgtgtaaagtgtaaagtgtagagctcatccagaacgctggctccagcgc
tgggagcagctgcttctcaagaggctggagatttccggaggtcctccgtcgaggttcatc
tgcacgcagctgctggaggagagcgtgtcgtcgggtccggctctgctgaggcacaaagca
ctgttcgagccctccaacacacccttcaggtctcgccggcgctccgctcttcccgtcaga
cggctgtggcagtatctggtcaaacaggaggaggttcaggagatgttcatacgcaacatc
ttcaccaagaaacgcgatccgaacgaggtacttgtgtctgttcaccaacagctgctcgtt
tgcacgcctcctgattgtgttttaacagccaccccgctctgtcgagtcattaatatgatg
ttgcacttgtgttaa
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integrated database retrieval system
