Sinocyclocheilus rhinocerous: 107728499
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Entry
107728499 CDS
T04916
Symbol
smarca4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107728499 (smarca4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107728499 (smarca4)
03036 Chromosome and associated proteins [BR:
srx03036
]
107728499 (smarca4)
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107728499 (smarca4)
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
107728499 (smarca4)
Chromatin remodeling factors
BAF complex
107728499 (smarca4)
PBAF complex
107728499 (smarca4)
GBAF(ncBAF) complex
107728499 (smarca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
107728499
NCBI-ProteinID:
XP_016394176
LinkDB
All DBs
Position
Unknown
AA seq
1625 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHGMMGPSPGPPSSGHPLPPQG
PSGYPQDNMHQLHKPMEGMHERVIPEDQRYAQMKGMGMRQGGHSGMGPPPSPLDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPTGSGAMEGGDPQAMGQQNRSGGAGGVAGSGPSGG
PPNAGGPGGAGGPTPFNQNQLHQLRAQIMAYKMLARGQSLPDHLQIAVQGKRPMPGMQQG
MPNMPPASGQGAGPPGPGGLGPGGPNYNRPHGMVGPNMPPPGPSGVPLGLQGQPTNGPPK
SWPEGPMVNAAAPASAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPTQPPMV
LHQKQNRITPIQKPRGLDPVEILQEREYRLQARISHRIQELENLPGSLAGDLRTKANIEL
KALRLLNFQRQLRQEVVVCMRRDTALETALNGKAYKRSKRQSLREARITEKLEKQQKIEQ
ERKRRQKHQEYLNSILQHAKDFKDYHRSITAKIQKVTKAIATYHANTEREQKKENERIEK
ERMRRLMAEDEEGYRNLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKDKKKKK
KKKKPENAESGAPALGPDGEPLDETSQMSDLLVKVIHVDSGKILTGMDAPKAGQLDAWLE
VNPGYEVAPRSDSEDSGSEEEEDDEEEQPQTSQSSSEEKKIFPDPDNEDVSEVDARHIIE
HAKQDVDDEYGNARFVRGLQSYYAVAHAVTEKVERQSSLLINGQLKQYQIKGLEWLVSLY
NNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKWAPSV
VKVSYKGSPAARRAFLPILRSGKFNVLITTYEYVIKDKQVLAKLRWKYMIVDEGHRMKNH
HCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAM
TGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR
HMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGI
VQGLDLYRASGKFELLDRILPKLCATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGS
TKAEDRGMLLKNFNDPSFQYFIFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDR
AHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGHERKAFLQA
ILEHEEQDEEEDEVPDDETVNQMIARSEEEFDHFMRMDLDRRREEARNPKRKPRLMEEDE
LPTWIMKDDAEVERLTCEEEDEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLDEIEE
EVRYKKTTRKRKRDRDLDLPGPATPSSSGRSRDKDDDRKKQKKRGRPPAEKLSPNPPTLT
KKMKKIVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYR
TLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEEESEGEDSEEEEE
EADEGSESESRSVKVKIKLSRKEKVERGKGRRRTGRSWRPKPVVSDDESEEDQEEEHSPS
GSEED
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgacccacctatgggcgggacccctcggccgggcccttccccaggccct
gggccgtctccaggggccatgttaggacctagtcctggaccctcacctggctctgcccat
ggaatgatgggccccagccctgggcccccctcctcaggacatccactacctccacagggc
ccctcaggttacccccaggacaacatgcaccagttgcacaagcccatggaaggcatgcat
gagagagtcattcctgaagatcaacgctacgctcaaatgaagggtatgggcatgagacag
ggtgggcacagtggcatggggcctccacccagtcctttggaccaacactctcagggctac
ccctctcctctgggtggttctgaacatgcccccagtccggtacctgctaacggccctccg
tctggccccatgatgcctactggttctggtgccatggagggcggtgacccacaggccatg
ggtcagcagaaccgcagtggtggtgctggtggtgttgcaggttcaggacccagtggagga
cctccaaatgcaggtggacctggtggagccggcgggcccactccttttaaccaaaaccag
cttcaccaactgcgggcacagatcatggcctataagatgctggcacgcgggcaatctcta
cctgaccacctacagatcgcggtgcagggaaaacggcccatgccaggcatgcagcagggg
atgcccaatatgccccctgcctcaggacaaggagcaggaccacctggaccaggaggcctc
ggacctgggggacccaactacaacagaccacatggaatggttggaccaaacatgccacct
ccaggaccttctggtgttcctctaggcctgcagggacaacccaccaatggaccacctaaa
tcttggcctgaagggcccatggtgaatgctgccgcccctgcaagtgcaccacagaagctg
atacctcctcagcccacgggacgcccgtctccagcaccaccttcagttcctcccgctgcc
tcgcccgtcatgccccctcagacccaatctccaggacaaccgacgcagccgcccatggtg
cttcatcagaaacagaaccgcatcacacccatccagaaaccccggggcctggacccagtg
gagatcctccaggagagagagtacaggttacaggctcgtatttctcatcgtattcaggag
ctggagaaccttccaggctctctggctggagacttgaggaccaaagccaatattgagctc
aaggcacttaggctcctgaactttcagagacagctccgccaggaggttgtagtgtgcatg
cggcgtgacacggccctagagacagcgctcaatggcaaggcctacaagcgcagcaagaga
cagtccctgcgtgaggctcgtatcacagagaaactggagaagcagcagaagatcgagcag
gaacgcaagcgccgtcagaaacaccaggagtatctcaacagcatcctgcagcatgcaaag
gacttcaaggattatcatcgctccatcaccgcaaagatccagaaggtgaccaaagccata
gccacgtaccacgccaacacggagagagagcagaagaaggagaatgagcgtattgagaag
gagagaatgagaaggctgatggctgaagatgaagagggttacaggaacctgatcgatcag
aagaaggacaaacgtctggcttacttgctgcagcagacagacgagtatgtggccaacctc
accgagctcgtcagagctcacaaagctgtccaggccctcaaagacaagaagaagaagaag
aaaaagaagaagccagagaatgctgagagtggagctcctgctctgggtccagatggagag
cctcttgatgagaccagtcaaatgagtgatttactggtgaaggtgattcacgtagacagt
gggaagatcctcaccggcatggacgctcctaaagctggacaactggatgcctggctggag
gtgaatccagggtacgaggtggccccgcggtctgatagtgaagatagcggctcggaggag
gaggaagatgatgaggaggagcagcctcagacctctcaatcttcatcagaggagaagaag
atatttccagatccagacaatgaggatgtgtctgaggtggacgcccgtcacatcattgag
catgctaagcaggatgttgacgatgaatacggtaatgccaggttcgttaggggcctgcag
tcgtactacgccgtggctcacgcagtcacagagaaggtggagagacagtcaagtctgtta
ataaatggacagctcaaacagtaccagatcaaaggtctggagtggctggtgtctctgtat
aacaataacttgaatggcattctggctgatgaaatgggtttgggaaaaaccatccagacc
attgcactcatcacctacctcatggagtacaaacgcctcaacggacccttcctcatcatc
gtccccctctcgactctgtcgaactgggtgtacgagtttgataagtgggctccatctgtg
gtgaaagtttcttataagggctctcctgctgctcgccgcgcatttcttcccattttgcgc
agcggcaagttcaacgtgctgatcaccacttacgagtacgtcatcaaagacaagcaagtg
ctggccaagctccgttggaagtacatgatagtggatgaaggtcaccgtatgaaaaatcac
cactgtaaactgactcaggtgttgaacacacactacctggcgcctcggcgtgtgctgctc
accggcacgccactgcagaacaagctgcctgaactgtgggcgctgctcaacttcctgctg
cccaccatcttcaagagctgcagcacctttgagcagtggttcaacgctccattcgccatg
accggagagaaggtggacctgaacgaagaggagaccattctgatcatccgtcgtctgcac
aaagtgctccgccccttcctgctcaggagactcaagaaggaagtggaggcccaactgcca
gagaaggtggaatatgtgatcaagtgcgacatgtcggccctgcagagagtgctgtacaga
cacatgcaggctaaaggagtgctgctcactgatggctctgagaaagacaagaagggtaaa
ggaggcactaagactctaatgaacactattatgcagttgaggaagatttgtaaccaccct
tacatgttccagcacattgaggaatctttctctgagcacttgggcttcactggaggcatt
gttcagggacttgatttgtaccgtgcctctggtaagtttgagctgctggaccgtatccta
ccgaagctctgcgccaccaaccacaaagtgctgctcttctgtcagatgacctcgctcatg
accatcatggaagactacttcgcctaccgcaacttcaaatacctgcgcttggacggaagc
actaaggccgaggatcgtggcatgttgctgaagaactttaatgatccgtcctttcagtac
tttatcttcttgctgagtaccagagcaggaggtctggggctgaacctgcagactgccgac
actgttatcatctttgacagcgactggaaccctcaccaggatctgcaggcccaggatcgc
gcccatcgtatcgggcagcagaacgaggtgcgtgtgctgcgtctgtgcaccgtgaacagc
gtggaggagaagatcctggctgctgccaaatacaagctgaatgtggaccagaaggtcatc
caggccggtatgttcgaccagaagtcgtccggccacgagcgcaaagctttcttgcaggcc
atcctggagcacgaagagcaggatgaggaggaagatgaagtgccagatgacgagactgtt
aatcagatgatcgctagaagcgaggaagagttcgatcacttcatgcgcatggatcttgac
cgccgccgtgaagaggcacgtaacccgaaacgcaaaccccggctgatggaggaggatgag
ctgcccacctggatcatgaaggacgacgcagaggtggaaaggctcacctgcgaagaagaa
gatgagaagatgtttggccgtggctcccgtcaaagaaaagaagtggactacagtgactcc
ctcacggagaaacagtggctgaaggccattgaggaaggcacccttgatgagattgaagaa
gaggtgcgctacaagaaaacgactcggaaaaggaagcgggaccgtgacctcgaccttcca
ggcccggccacgcctagctccagtgggcggagcagagataaagatgacgaccgtaagaag
caaaagaaacgaggtcgtcctcctgctgaaaaactctcgcctaaccctcccacgctcacc
aagaaaatgaagaagattgtggatgcagtaattaaatacaaggatggcaacggaagacaa
ctgagtgaggtgtttattcagttgccgtctcgtaaagagctaccagaatattacgaactc
attcgcaaacctgtggacttcaggaagatcaaggaacgcattagaagtcataagtaccgc
actctgaacgacctggagaaagatgtcatgcttctctgtcagaacgctcagaccttcaac
ctggagggatcactgatctacgaggactctatcgtgctgcagtctgtgttcaccagtgtg
aggcagaagatcgagaaagaggaagagagcgagggagaagacagtgaggaggaagaggaa
gaggcagatgaaggatcagagtctgaatctcgttcagtgaaggtgaagataaagctgagt
cgaaaggaaaaggtggagagaggaaagggaagacgccgaaccggacgcagttggcgccct
aaacctgttgttagtgacgacgaaagtgaggaggaccaggaagaggagcattctcctagt
ggcagcgaggaagattaa
DBGET
integrated database retrieval system
