Sinocyclocheilus rhinocerous: 107728570
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Entry
107728570 CDS
T04916
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M-like isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107728570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107728570
Spliceosome [BR:
srx03041
]
Common components
Common spliceosomal components
hnRNP proteins
107728570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
RRM_3
RBD_DEAH11
HnRNP_M_NLS
RRM_5
DUF7552
Motif
Other DBs
NCBI-GeneID:
107728570
NCBI-ProteinID:
XP_016394270
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MSSELKSEIPEKQEQGNAVNGKSNHESRKERPQKRGGGGRFEPYGNPNKRYRVFVSNIPY
DVKWQTLKDLMKEKVGEVTYVEHLMDGEGKSRGCAVVEFRTEELMKKAVEKVNKHVMNGR
PLKVKEDPDGVIAQREANRAHGGGGGGGGGPPGMGGGMGGGMGMGPGPGGPSMVNIPPSL
MNNPNIPNEIIHGLQAGKIGSTIFVANLDYKVGWKKLKEVFGMAGAVVRADILEDKDGKS
RGMGTVTFEMPLEAVQAVSMFNGQLLFNRVMHVKLDEKSLPKGDFAPPDRPPALPRGLSG
VGLGLGPGGQPIDATQLNRGGMGNMGPGGMDGMGFGGMGRMGGMDNFGGGMNNMDRFGTS
GMGRMNDMDRGIGGGFDRDFGGRNDMGMSRSNFGDSFDRGMGNSMGMDRMNSGMDRLGGG
MDRMGGLDRMGMDRMDRMSDLDRLGSGFDRMGSGLDRLGPSMDRLGSGLDRMSSSVDRMG
PGGFDRLGPSGMDRMSGGMAFASPMGIDRMNTGLDRMGSNFDRMGSGGMDRFPSSGLDRM
GSSMDRMGSGGVGGQFDRPADMDRGNFGTPFSGSGQGGPGAGGANARKGCQIFVRNLPFD
FTWKMLKDTFNSCGIVQYADIKMENGKSKGCGVVRFDSPETAERACRTMNGYRLSGREID
VRIDRNA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgagctaaaatcagagataccagagaaacaagaacaaggaaatgctgtgaac
ggcaagtccaaccatgagtcgagaaaggagaggccccagaagcgtggtggggggggccgg
tttgaaccttacgggaaccccaacaagagataccgtgtgtttgtcagcaacattccctat
gatgttaaatggcaaactctgaaagatctcatgaaggaaaaagtgggtgaggtaacgtac
gtggaacacttaatggacggagaaggcaaatcaaggggttgtgcggtggttgagttcaga
actgaagagctcatgaaaaaggctgtagagaaagtcaacaaacatgtcatgaacggtcgt
cctctcaaggtcaaagaggatccagatggagtgattgcccagcgtgaagctaatagggct
cacgggggtgggggtggtggcggcggcggacccccaggcatgggtggaggaatgggagga
ggaatggggatgggcccaggccctggcggtccttccatggtcaacatccctcccagtctc
atgaacaacccgaacatccccaacgagatcatccacggactccaggctggaaaaatcgga
agcaccatttttgtggccaatctggactacaaggttggatggaagaagctcaaggaggtg
tttggaatggctggagctgttgtgcgtgcagatatcctggaggataaagacgggaagagc
aggggaatgggaactgtcacatttgagatgccccttgaggctgttcaagcagtctcaatg
ttcaacggacagctcctcttcaacagggtcatgcacgtcaaactggatgagaaatccctt
cccaaaggtgactttgcacccccagaccgtcctccagcccttcctcgtggtctgagtggt
gtcggtctcggtctgggacccggcggtcaacccatcgacgctacccagctcaaccggggt
gggatgggcaacatgggaccaggaggaatggatggaatgggatttggtggcatgggtaga
atgggagggatggataattttggaggtggtatgaacaacatggatcgtttcggcacttct
ggaatgggaagaatgaatgatatggatcgtggaatcggcgggggctttgatagagatttc
ggtggccgtaatgacatgggtatgtcccgtagcaactttggagactcatttgaccgagga
atggggaactccatgggaatggatcgcatgaactctggcatggatcggcttggcggcggc
atggaccgcatgggaggactggaccgaatgggaatggatcgcatggaccgcatgtctgat
ctggaccggttgggatctggcttcgaccgaatgggttcagggcttgaccgactggggccc
agtatggatcggctgggatcaggcctcgaccgcatgagctccagcgtggaccgcatgggt
cctggtgggttcgaccgcttgggcccgtccggcatggatcgcatgagcggcggaatggcc
tttgcctctcctatgggcatagaccggatgaacacaggcctcgaccgaatgggttcaaac
ttcgaccgcatgggctccggtggcatggaccgcttcccctcctcaggtctcgaccgcatg
ggttccagcatggaccggatgggctctggtggcgttggtgggcagtttgacagacctgct
gatatggatcgtggcaatttcgggactcctttcagtgggtctggacaaggagggccaggg
gctggtggagccaatgccaggaagggctgccagatttttgtcagaaatctgccctttgac
ttcacttggaagatgttgaaggacactttcaattcatgtggcattgtgcagtatgcagac
ataaagatggagaacggcaagtccaagggctgcggtgtggtgcgctttgacagtcctgag
accgccgagcgagcctgtcgtaccatgaacggctaccggctcagcgggcgagagattgac
gtcaggatcgacagaaatgcataa
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