Sinocyclocheilus rhinocerous: 107728724
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Entry
107728724 CDS
T04916
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107728724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107728724
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107728724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
T3SS_needle_reg
AAA_27
Motif
Other DBs
NCBI-GeneID:
107728724
NCBI-ProteinID:
XP_016394502
UniProt:
A0A673LN97
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MAVQPKQNLSMDSASEHGFLNFYFSMSEKPDTTVRVFDRNDYYTVHGKDAAFAAKEVFKT
NGVIKNLGTGNKRLESVVLSKMNFESFVRDLLLVRQYRVEVYKNASKSSKEHDWQISYKA
SPGNLTQFEEILFSSGGGPGEGAAGVVGVRLGTGADGQRVVGVGYVDSTLRKLGVCEFPD
NDQFSNLEALLVQIGPKECVLPGGDAGGDLGKLKQVVQRGGILLTDRKKSEFTTKDIVQD
LNRLLKARKGETVSSAALPEMEKQIAMSCLQAVIKYLELLSDEANFGSFKITTFDLNHYM
RLDNAAVQALNLFQGSSDDATGTHSLAGLLNKCRTPQGQRLVSQWIKQPLIDKNKIEERL
DLVETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSANLQDCYRVYQAVGHLPNLVQA
LERYSGKHQVLLHAAFISPLNDLISDFSKFQEMIETTLDMNQVEHHEFLVKPSFDPTLSE
LRENMNRLEKAMQAALNSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNKKFT
TLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVIA
QLDAVVSFAVVSHAAPVPYIRPKILEKGSGKLVLKAARHPCVEAQDDVAFIPNDVTFARG
EEMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIK
GVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATCLKSFCLF
ATHFHELTALAQQVPTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELANFPKHV
IANAREKALELEEFQDISRAGEEAGPEAKKRCLEKQEGEKIIEAFLAKVKSMPAESMSDE
AVKEELRKLKAEVIGQNNSFVNEMVSRSAKVKLTSA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacctaaacaaaatctgtccatggacagtgcatctgaacatggatttctg
aatttttatttttctatgtccgagaaaccagacaccaccgtgagagtatttgatcgaaac
gattattatacggtgcacggaaaagatgcggcttttgcagccaaggaagttttcaagacg
aatggagtcatcaaaaacctgggcacaggaaataagaggttggagagtgtggttctcagt
aagatgaactttgagtcatttgtgagggacctgctgctggtcaggcagtaccgggtggag
gtttacaagaatgccagtaagagtagcaaagaacatgactggcaaatatcttacaaggcg
tctccaggaaatctgacccagtttgaggagattttatttagcagtggaggagggcctggg
gagggagctgccggtgttgtcggggttcgtcttggcaccggggccgatggacagcgtgtt
gtcggtgttggctatgtggacagcaccctcaggaaacttggtgtgtgtgaatttccagac
aacgatcagttttccaatctggaggctcttcttgtgcagatcgggcccaaagagtgtgtg
cttcctggaggagatgcaggtggagaccttgggaaactcaaacaggtggtacagcgtggt
ggcattctgctcacagacaggaagaaatcagagttcacaaccaaagacattgtgcaggat
ctgaatcgtctactgaaggcccgtaagggagagactgtgtccagtgctgcacttccagag
atggagaaacagattgcaatgtcttgcttacaagcagtcatcaaatacctggagcttctc
tcagatgaggccaattttggttccttcaagataaccacctttgacctcaaccactacatg
cgtctggataatgctgctgtgcaggccctgaatctcttccagggttcctctgatgatgct
acaggcacacactctctggcaggcctcttaaacaaatgtcgtaccccacaaggacagcgg
ttggtcagccagtggatcaaacagcctctcattgacaaaaacaagatagaagaaagactg
gatcttgtggagacttttgtagaggactctgagctgaggaagagttgtcaggaggatctt
ctccgccgttttccagacctgaaccgaatggcaaagaagttccagcgtcaaagcgctaat
ttacaagactgttacagggtctatcaagctgtggggcatctgccgaatctggtgcaggcg
ttggagagatacagtgggaaacatcaggtcctcctgcacgcagcattcatctctcccctc
aacgacctcatctctgacttctccaaatttcaggagatgattgaaaccacactggacatg
aaccaggttgaacatcatgagttcttggtgaaaccctcatttgatcccacattgagtgag
ctcagggagaacatgaatcgtttggagaaagccatgcaggctgccttgaacagtgcggct
cgtgaactggggctggaagcagctaagactgtgaagcttgaatccaatgcacagattggt
tactttttccgagtcacatgcaaagaagaaaagagtctccgcaacaacaagaaattcact
actttagatgttcaaaagaatggagtgcgattcactaacagtaagctgagctctttgaat
gaagagtacactaaaagcagagaagagtatgaagaggctcagaatgccatcgtcaaagag
atcatcagcatagccgctggctatgtggatccagtacagactctgaatgaggtgatagct
cagctggatgcagtggtgagctttgctgtggtgtcccatgctgccccagtgccttacata
aggcctaaaatactagagaaagggtcagggaaactagttttaaaggcggcaagacatccc
tgtgttgaagcccaagatgatgtggctttcattcccaatgatgtcaccttcgcaaggggc
gaggagatgtttcatatcatcacaggtccaaatatgggtggtaaatctacatacatccgt
caagtgggtgtgatcgtgctgatggcacagattggttgttttgtaccatgtgatgaggca
gagctaagtgtggtggactgcgtgctcgctcgagtgggtgcgggggacagccagatcaaa
ggagtgtccacctttatggctgagatgctggagacggctgctattctacgatcagccaca
gaggattctctcatcattattgatgaattgggcagaggcacatccacatacgatggcttt
ggtctggcctgggcaatctcggagtacatcgccacctgcctcaagtccttctgcctgttt
gccactcacttccatgagctgacggcacttgcacagcaggttcccactgtccgtaacctc
cacgtcactgccctgaccacagacagcactctcaccatgctctacaaggtgaaaaagggc
gtttgtgaccagagctttgggattcatgtggcagagcttgctaacttccccaagcatgtg
attgctaatgcacgggagaaggctttggagctagaggagtttcaggatatctcaagagct
ggggaggaagctggacccgaagccaagaaacgctgccttgagaaacaggagggggagaag
atcatcgaggctttcctggctaaggttaaatcaatgcctgctgaaagcatgtctgatgag
gctgtcaaagaggagctgcgcaaactcaaggcagaggtcattggacaaaacaacagcttt
gttaatgagatggtgtcacgttctgccaaagtcaaactgacttcagcctaa
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