Sinocyclocheilus rhinocerous: 107728862
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Entry
107728862 CDS
T04916
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107728862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107728862
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107728862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107728862
NCBI-ProteinID:
XP_016394643
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRSDGRELGEFRPTTLNISSISTADGSALVKIGNTTVIC
GIKAELTMPPSDAPNKGYMVPNVDLPPLCSSKFRPGPPGEQAQAASQFIADVIESSDLIN
MEELCIEKSKLCWVLYCDIMCLDYDGNLLDACIIVLLAALKNAQLPEVTINKETDLAEVD
IPKKKPLKINRLPVGSSFAVFDDSIIIVDPTAEEESLSTALLTVVTDEEDRLCAVHKPGG
TSLSGEKLQHCINRAITRNKEISKLVGKVIESTKTAK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaaaaccgcagagcctctagaatatcacaggagctttttgaaagaa
aactgtcgttcagatggaagggaattgggagagttcagacccacaaccttaaatattagc
tctatatctacagctgatggatcagcactggtgaaaattggaaacaccacagtgatatgt
ggaatcaaagctgagttgactatgccaccatctgatgctccaaataaaggatatatggtc
ccgaatgtagatctgcctccactgtgctcatctaaattcagacccgggccaccaggagaa
caggctcaggcggccagccagtttatcgcagacgtcattgaaagttcagatttaataaat
atggaggaattgtgcattgaaaaatctaagctttgttgggtgctgtactgtgatattatg
tgtttggattatgacgggaacttacttgacgcctgcatcatagttctgctagcagcttta
aagaacgcacaactccctgaagtcacaataaacaaagagacagatttagcagaagttgac
atcccgaagaagaagcccttgaagatcaaccggcttccagttggttcatcgtttgcagtg
tttgatgactctattatcatagtcgaccccacagcagaagaagaaagcttgtcaacggcg
ttactgactgtggtaacagacgaggaggatcgactctgtgccgtccacaaaccaggtggg
acgtcgttatctggtgagaaactgcaacactgcataaatcgagccataacgagaaacaaa
gaaatcagcaaactggtgggcaaagtcattgagagcacgaagacagcgaaataa
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