Sinocyclocheilus rhinocerous: 107728875
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Entry
107728875 CDS
T04916
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107728875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107728875
Membrane trafficking [BR:
srx04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107728875
Protein recycling
Other Rab GTPase associated proteins
107728875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Sca2
Motif
Other DBs
NCBI-GeneID:
107728875
NCBI-ProteinID:
XP_016394662
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MSQRSERRGIHVDQSELLCKKGCGYYGNAAWQDLCSKCRKEKYQRARQRQIQEDWALAEK
LQREEEAAYVSSHSSSQTQPPQSHSQHSLATFSKFEEKKTNEKTRKVTTVKKFFSPSSRT
APKKVPPEKESEKEKLQGRRESHGENLLRDLKGIFTQPWEMASPTEESHEGKTPSPSITR
QSSIETDHVSRDFVEFLKTLQKPGREIHKQSRGFIESMGNKKDLSAEELSECVQDFYQGM
SDRLLNHFKGSSEKVDRVMDQVEKYIMTRLYKSVFCPETSDDEKKDLATQHRIRALHWVT
IQMLCVPVDEEIPEVSDSVVKAITDIIEMDSKRVPRDKLACITSCSKHIFSAIRVTKNEP
ASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAIAFIEKL
DAQSLNLSPEDFERYMSGQASPRRQDDTAAWPQSGTHVNPALSQIHHNLKLLSSLEKRQQ
QVIEGAQNLQAELAEWQDSVSREVQEILERYPLEIKPRASAIDAENVENDRLPPPLQPQV
FAG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcgctcagagcgacgggggatccatgtggaccaatcagaactgctgtgtaag
aaaggctgtggttactatggcaacgctgcatggcaggacctatgctccaagtgcaggaag
gagaagtaccagagagctcggcagagacagatccaggaggactgggctctggctgagaag
ctgcagcgagaagaggaggcggcttatgtcagcagtcacagttcctctcagacccagcct
ccacagtcccactctcagcactctctcgccaccttctctaagtttgaggagaagaaaacc
aatgagaagacccgtaaggtcaccaccgtaaagaagttcttcagcccctcctctcgcacg
gcccctaaaaaagtcccccctgaaaaagaaagcgagaaagagaagttgcagggcaggagg
gagagccatggagaaaacctcctgagggatctgaagggcatttttacccaaccctgggaa
atggcctctcccactgaagaaagccacgagggaaaaacgcccagtccctccattacccgc
cagtccagcatcgagactgatcacgtgtcacgagactttgtggagtttctcaagacctta
cagaagcccggcagagagatccacaagcagagccgtggtttcatagagagcatgggaaat
aaaaaggatctcagtgctgaagaactgtcagagtgtgtgcaggacttctatcagggcatg
tctgaccgactcttgaatcattttaaaggctcctctgagaaagtggacagagtaatggac
caagtggaaaaatacatcatgactcgactctacaagagcgtcttctgtccagagacctcg
gatgatgagaaaaaagacctggctacccagcacaggattcgggcgttacactgggtcacc
attcagatgttgtgtgttcctgtggatgaagagatccctgaggtctctgatagtgtagtc
aaagccatcactgatatcattgagatggactccaagcgtgtgcccagggataaactggcc
tgcatcaccagttgcagcaagcatatattcagtgccatcagggtcaccaagaacgaacca
gcttctgcagatgacttccttcccaccctcatctatattgtgttgaaggccaacccgcca
cggctgcagtccaacatccagtacatcacacgtttctgcaacccttcaagactcatgacc
ggagaggatggatactacttcaccaacctgtgctgtgccattgccttcatagagaagctg
gatgcccagtcgttgaatctcagccctgaggactttgagcgctacatgtccggtcaggct
tcccctcgaaggcaagacgatactgcagcctggccgcagagtggtacccatgtcaaccca
gcacttagccagatccatcacaacctcaagctcctatccagccttgagaaaagacagcag
caggtcatcgagggggcgcagaacctgcaggccgaactggcagaatggcaagacagcgtg
tcccgcgaggtgcaggaaatcctggagcgatacccactggagatcaaaccacgagcatcc
gcgatcgatgcggagaatgtggagaacgacaggctgccacctccccttcagccacaagtg
tttgcaggttag
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