Sinocyclocheilus rhinocerous: 107729004
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Entry
107729004 CDS
T04916
Name
(RefSeq) tubby-related protein 4-like
KO
K24720
tubby-related protein 4
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
srx04990
]
107729004
Domain-containing proteins not elsewhere classified [BR:
srx04990
]
Other domain-containing proteins
Tubby family proteins
107729004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Prp19
YdbH-like
UvrD_C
WDR55
Beta-prop_ELP1_1st
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
107729004
NCBI-ProteinID:
XP_016394841
LinkDB
All DBs
Position
Unknown
AA seq
1639 aa
AA seq
DB search
MFAAVELGPVLCSDSNILCLSWKGRVPRSEKEKPVCRRRCYEEGWLAAGNGRGVVGVTFT
SSHGRRDRPSPQRINFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGMQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHEAEGIASMAWNYPSFLLEDSSESDTDSDDYTPL
QVHRLKPLLTVCFTSGDVSLMSNYDDLSPTLIRTGLKDVVVQWCSQGDLLAVAGMERLVM
TSDPTRNAIVKFYNVCGEHIYSLETPAQRPISALCWGHRDSRLFLASGPALYVLRVEHRV
ASLQLLCRQVIASAVHEEKDVAKLSMPSRLSTSVSSAFASTIKPPIPDPNNMRDFVSYPT
SGNERLHCTMKRTEDNPEVGGPCYTSFFAWYLLCRDLVCPFTNRINIDPRKSPKLSRTAQ
EISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQVTSNIWGTKFKIVGLAAFLPTN
LGAVIYKTSLLHLQPRQMTIYLPEVRKISVEYINLPMFSPNVFSEDEDDLPVTGASGITD
DNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVQLDVLSNPTSTVAPPGVSDQG
QQDTVLTAQYTVPARYSSPGQVIFGGMEVGRILVAQSQQQQQLQQHYQQQQQHQQLQQQL
QQYQLQQQQLLQHQHMQQQQQQHMQQQIQQMQQQQQMQQQLQHQIQQQHLQMQLQLQHQQ
MQQQLQQQHQIQIPVPALPSGQPSCPVIQLTQSTIPDVPPTAEHGAEHELLLKIKTTRSA
PQLAEVDAVVFTAPLEISKMNPPPPYPGTVSAAMAAVSATVSTSCTSGSSSSTSSSGEAC
VKKGDLTLYPPGAQAAQYPTPLGYERITTFDSSGNVEEVCRPRTRIVCNQNVYTLQGPGS
SATLRVSSSSSAVEGKKVQLPYASATLNRLTVPRYSIPSGDPPPYPDTANQGGAGRNPGQ
RLDSSLIHATLRRNSREAALKVSQILDPQRTLPSKAKASALSASYQPRGPTALYTCSQCS
SNGGVSAGATSSGSNGIAGGTIIRQDFPLTGGGAPHSTVIVHSNSASPLTSQSSYSLLGM
DGTGGVSSAGGNRERADYINSAFTEDEALNQSLRQMTLNTEVVSLTVKRPPPYQWDPSTN
EEIWVPQERTATLPTSGPPASHKPPPLILSPAQHLDVSRLPFVLSPKSPMSPNAVTFQLA
GAYQIALPYPPSAVYSGSVQASPRPTSPKEVVTPLPFSQQDQAVVLPPGYSPNLACCPLP
PMYPGTASCSNLPVTPITLHPWGSYNPCPPMPSPPGPAPSLPPKTSHLLDKPVLSPPPQP
PPLPTPPPDLQSPPESIAEAGENFQEVLSLNESPVPQRADRFGKKNRKRLDNSRAEEANV
PAITEGGNKSKKEGRALSDFNSLISSPRLGGRDKKKPKSQKEQLKAKKLSKATTNEFQDS
SESEPEVFISGDELMNQSQSGKKSWKAKRNLRAGGCELDEIKCRKANEKEDRGLGSQGFV
YIMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYP
FSAVQAFAVALANVTQRLK
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcggcggtggagcttgggcccgtcctctgcagcgactccaacatcctgtgcctg
tcctggaagggccgcgtgccccgcagcgagaaggagaagcccgtgtgcaggaggcgctgc
tatgaggagggctggctggccgcggggaacggccggggagtcgtgggcgtcaccttcacc
tccagccacggcaggagagaccggccctccccgcagcgcatcaacttcaacctccgggga
cacaacagtgaggtggtgttggtgcgatggaacgagcccttccagaagctggcgacctgc
gacaccgacggcgggatcttcgtctggatccagtatgagggccgctggtcagtggagctg
gtcaatgaccgcggagctcaggtgagcgacttcacctggtctcacgacggcatgcaggcg
ctgatctcgtaccgcgacggcttcgtgctggtgggctcggtgagcggtcagcgccactgg
tcctcggagatcaacctggagagtcagatcacctgtgggatctggacccccgacgaccag
caggtgttgtttggcacagcggacgggcaggtgatcgtcatggactgtcacggccggatg
ctggctcatatactgctgcacgaggcggagggcatcgctagcatggcctggaattacccc
agctttctgctggaggacagcagcgagagcgacacggactcggacgattacacgcctctg
caggtgcaccgtctgaagccgctgttgaccgtctgcttcacgtctggagacgtcagtttg
atgagcaactacgatgacctctcacccacgttaatacgcaccggcctcaaagatgtggtg
gtgcagtggtgctctcagggcgacctgctggctgttgctggcatggagagactcgtgatg
acctctgaccccacccgaaacgccattgttaagttttacaatgtttgcggtgaacacatt
tactcactggagacacctgctcagaggccgatcagtgcgctgtgctggggccatcgggac
tcgcgtctgttcctcgccagcggcccggcgctgtacgtgcttcgcgtcgagcatcgggtc
gccagcctgcagctgctgtgccgacaggtgatcgccagcgcggtacacgaggagaaagac
gtggccaagctcagcatgccctctcgcctgagcacaagcgtgtcttctgccttcgcttct
accattaagccccccatcccggatcccaacaacatgcgggactttgttagttatccgaca
tcaggtaacgagcgtctgcactgcaccatgaagcgcaccgaggacaaccctgaggtcggc
ggcccttgctacacctctttcttcgcttggtaccttctctgtagagacttagtgtgtccc
tttaccaacaggataaatatagatccccgtaagtcccccaagctctcccgcaccgcacag
gaaatatcgcgatcgcctcggttacccattcgcaagccctccattggctctccgagtctg
actcggcgggagtttccgctcgatgacatcacacagcacaattatcttgcgcaagttaca
tctaacatatggggaacaaagttcaaaattgtggggcttgcagcatttttgccaacaaat
cttggagcagttatctacaagacaagtctgcttcacctccagcccagacagatgaccatc
tacctccctgaggtgaggaagatctcagtggaatacattaacttacctatgtttagtcct
aatgtcttcagtgaggatgaggacgacctgcctgtcacaggagcatcaggaatcactgat
gataatccaccttgcactgtcaacatacccatcgcccccatacacagccccgcgcaagcc
atgtccccaacccagagcattggccttgtccaatccctattagccaatcaaaacgtccag
ttggatgtgttgtccaatccaacatcgactgtggcaccacctggggtgtctgaccaagga
cagcaggacactgtgctcactgcgcagtacaccgttcctgccaggtattctagtcctgga
caggtaatctttgggggtatggaggttggtcggattttagttgcgcaatcccaacaacaa
cagcagctgcaacaacattatcaacagcagcagcagcatcaacagctacagcaacagctt
caacaatatcagctgcagcagcaacagctgttgcagcatcagcacatgcagcaacagcag
cagcaacacatgcaacagcagatccagcagatgcagcagcaacagcaaatgcagcagcag
cttcagcatcaaatccaacagcagcatctgcaaatgcaactgcagctgcagcaccagcaa
atgcagcagcagttgcaacagcagcatcagatccaaatccctgttccagctttgccctca
ggtcaaccgtcatgcccggtcattcagcttacgcagagtaccatcccggacgttccccca
acagcagagcacggcgcggagcatgagctcctgcttaaaattaaaacgacgcgttctgcc
cctcaactggctgaggttgatgcagtagtttttactgcccctcttgagattagtaagatg
aatcctccccctccttacccgggcacagtttccgctgccatggccgcagtttccgctact
gtttctacaagttgcacctcgggaagcagctccagcacttcatcctcaggggaagcttgt
gtaaagaaaggggatctaaccttgtatccacctggagcacaggcagctcagtacccaacc
ccactgggctacgaacgaatcaccacatttgacagcagcggaaatgtggaggaggtgtgc
cgtccccgcacgcgaatcgtttgcaaccagaacgtttacacactgcaaggcccgggaagc
tctgccaccctcagggtctcatcatcttcctctgctgtagaggggaagaaggtgcagttg
ccctacgcctcagccacgttgaaccgtctcactgtgccaaggtactctatacccagcggg
gacccgcccccttaccctgatacagccaatcagggtggagcggggcggaaccctggccag
agattggacagcagcttgattcacgctaccttgaggcggaacagtcgggaagctgcgctg
aaggtttctcagatcctggatccccaaagaaccctgccctccaaggccaaagccagtgct
ttgtctgcttcctatcagccgagagggccgacggctctttatacatgcagtcagtgcagt
agtaacggtggggtcagcgctggggccaccagcagtggaagtaatggaatagctgggggg
acaatcattaggcaagatttcccactgaccggaggtggtgcacctcacagcactgttata
gtgcactcaaacagtgcctcgcctcttacttcccaatcttcctacagcctactcggtatg
gacggaaccggtggagtgtctagtgcaggtggaaacagggaaagggctgactatatcaac
tccgcctttacagaggacgaggctttaaatcagtctctgaggcaaatgactcttaatacg
gaggtagtgagtttgacagtcaaacggccaccaccgtatcaatgggatccgtctactaat
gaagagatctgggttccgcaagagcgtactgctactctgcccacctctggacctcctgca
tcccacaaacctcccccactcatcctcagccctgcacagcatctggacgtctcccgtctt
ccgtttgtcctctcgcctaaatctccgatgagtcctaacgctgtaactttccaactggcg
ggagcataccagattgctctgccctatccaccaagtgcggtctacagtggttccgtgcaa
gcttctccacgtcccacctctcccaaagaggtggttactcctcttcccttttcccagcag
gaccaagcagtggtcttgccacccggttattctcccaatcttgcttgctgccctctccca
ccaatgtaccctgggacagcttcttgttcgaatctgcctgtgactcccattacgcttcat
ccgtggggttcttacaatccctgtccacccatgccaagccccccaggtcctgctccatcc
cttccaccaaagacctcgcacttgctggataagcctgttctttctcctccccctcaacca
cctcctctgcctacgcctcctccagacctccagagtcccccagaatccatcgccgaggct
ggggaaaactttcaagaggtgctctcgctcaacgaaagcccggttcctcaaagagcggat
aggtttggcaagaagaaccgcaagcgtttggacaacagtcgggcggaggaagccaatgtt
ccggcgatcacagaaggaggcaacaagtccaaaaaagagggccgtgccctcagtgacttc
aactccctcatttccagtccgaggttaggcggtcgagacaaaaagaaaccgaaaagccag
aaagagcagctgaaagccaaaaagctaagcaaggccaccaccaacgagttccaggacagc
tccgagagcgagccggaggtcttcatcagtggcgatgaactgatgaaccagagccagagc
ggtaaaaagagctggaaagcaaaaaggaacttgcgggcgggaggttgcgagctagacgaa
atcaaatgccgaaaggctaacgagaaagaagaccgtggcctcggcagccaagggttcgtc
tacatcatggccaacaaacagcctctttggaacgaagccacgcaggtctaccagctggac
tttggaggaagagtcacgcaggaatcggcgaagaacttccagattgagctcgaggggaga
caggtgatgcagttcggaaggatcgatgggaacgcatacatcctggactttcagtacccc
ttctcagctgtgcaagcttttgctgtagcacttgctaatgtcacccagcgcctcaagtga
DBGET
integrated database retrieval system