Sinocyclocheilus rhinocerous: 107729280
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Entry
107729280 CDS
T04916
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107729280 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107729280 (ndc1)
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107729280 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Curto_V3
Motif
Other DBs
NCBI-GeneID:
107729280
NCBI-ProteinID:
XP_016395229
UniProt:
A0A673FSY9
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MFSLKQNSWFIRKVVIWRAVASIAWSVLLLPVTATVFVLLSRFSPFHPIQWISDCTSLLA
ASSTIFSLVVLCGVVLITGFFNLEFYTLVPSIPCSRMALLGTVLHPRQCVHSLVYCTMGM
LVMWCASVTIGGRYSTLGTPCRQSQSGEVVTCLNEYHLFILLAGAFMGYSHSFLGVVQNM
YYVSFQPIQQYKYPRFKGCLPMVVKCSVIQALYSARNFAAFYFFFGYAPKTWISSTLNLQ
IDSSLQPLDSLTGFLDFSLLYHLSISGTFLYLTWYLTVLLFRIYVTEAYSFPVQSTFTED
AEQCLPKVLAEKNTLVMKFLALQDLALLSQHSLSRRLEVFSLSQPGGHAHNWNAISRECL
SLLSELTQRLVAHQDAIASNGRVKSQSASSDTRSASSSCSVVSGTEDIAETPRLSVPLRT
PGSVFKSSVGGANSALVAPFTPDVDSPFSSPAIRRLVGQQDPQSPCFGTVQSPHIMRRGP
KLWSASTESQSSGSPPASPATVPSPPAASQKPSFLAQWLQNRREQVKSFLAKRVLIMYLF
NKLPEASSQALFADSQAHIWALQGLSHLVAASFSEDQFGVVQTTLPNILSCLVVLLEAVD
RHFKLPHASSKPVRTICSMGDSTYKTLRFALRAALKTAIYKITTTFGEHLNAVNISTEHR
KRLQQFLEFKD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctgaaacagaattcttggtttataagaaaggttgtgatatggagggctgtg
gcgagtattgcatggtcagtgcttctcttgccagtgacagctacagtctttgtgctcttg
agcagattcagcccttttcaccccatccaatggatttcagattgcacaagtcttcttgcg
gcctcaagcaccatcttttcccttgtggtgctgtgtggggtggttctgatcactggcttt
tttaacctggagttctacactttggttccctctattccatgttcacgcatggctctcctg
gggacggtgctccaccctcgacagtgtgttcattctttggtctactgcaccatgggcatg
ctggtaatgtggtgtgcttctgttaccatcggtggccgttacagcactctaggaactccc
tgcaggcaaagccagagtggtgaagtagtgacctgtctgaatgagtatcatctctttatt
ctcctggctggggccttcatggggtacagtcatagtttcttgggagtggttcaaaatatg
tactatgtgtcctttcaacccatacaacaatacaaatatccgcggttcaagggctgtctg
ccaatggtggtgaagtgcagtgttattcaggccttatattcagccaggaattttgctgct
ttctatttcttttttgggtatgctcctaagacctggatctccagcacacttaatctacag
atagacagttctctccaaccactggattcattgactggatttctagacttctccctcctt
taccacctgtcaatcagtggcactttcctgtacctaacctggtatctcactgtgcttctc
ttcaggatttatgtcacagaggcctacagttttccagtgcagtccacatttactgaggat
gcagagcagtgtcttcccaaagttttggctgagaagaacactttagtcatgaagtttttg
gctctacaagacctggctctgttatcacaacattctctctcacgcagactagaagtcttc
agtctgagtcagccaggtggtcacgctcataactggaatgccatcagtagggaatgtctc
tctttgctgagtgagctgacacagagactggtggctcatcaggatgcgattgcctctaac
ggccgagtcaagtctcagtctgccagcagtgacaccagatcagcctcttcaagctgctca
gtggtgtcaggaacagaggacattgctgagacccctcgactcagtgtcccgctaaggacc
cctggttcagtcttcaagtcatcggtggggggtgcgaacagcgctttggtggctcctttc
accccagatgtggacagccctttctcttcccctgctattcgacgtctggttggccaacag
gatccccagtctccctgctttggtacagtacaaagcccccatatcatgaggagagggccc
aaactgtggagtgcctccacagagtcacaatccagtggcagtcctcctgcctcccctgcc
actgttcctagtcctcctgcagccagtcagaaacccagcttccttgcccagtggctacag
aacaggagagagcaggttaaaagctttttggcaaagcgggtgctgataatgtatttattt
aacaagcttccagaagcctctagccaagctctgtttgctgacagccaggctcatatctgg
gctctccaaggactatcgcatctggtggcagcctctttctctgaggatcagtttggagtt
gtgcagaccacattacccaatattcttagctgcttggtagtcttgctagaggctgttgac
agacacttcaaactgccacatgcctccagcaaacctgtgaggactatctgcagtatggga
gactccacctacaaaactctaaggtttgcgctgagggctgcgctgaagactgccatctac
aagataactaccacttttggagagcacttaaatgctgtgaatatttcaacagaacataga
aaaaggcttcagcagttcttggaattcaaggattag
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