KEGG   Sinocyclocheilus rhinocerous: 107729287
Entry
107729287         CDS       T04916                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03013  Nucleocytoplasmic transport
srx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107729287
   03015 mRNA surveillance pathway
    107729287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srx03019]
    107729287
   03041 Spliceosome [BR:srx03041]
    107729287
Messenger RNA biogenesis [BR:srx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107729287
Spliceosome [BR:srx03041]
 Complex C
  Other components
   EJC/TREX
    107729287
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 107729287
NCBI-ProteinID: XP_016395239
UniProt: A0A673N1R3
LinkDB
Position
Unknown
AA seq 666 aa
MAVVVRSLQDQLEKAKESLKSVDENIRKLTGRDPSELRPGQNRRLTITGPGGGRGRGINL
LRRALSDSGGGPPAKQRDIEGALLRLAGVQRARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESTVSTERLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNSKLIKFIRTKTKP
PIFYLPGRMCSATQKLLEESQKKLNGVFDERREAFAEQLNKMEARPRRQSQRTGDREMED
SRRAEETKKEDQEEGKVGVGRTGNRHDVEMEDEEEDVVEEEGEESSEIREREGNQEQEQS
EKDKHEESEQKAEEEDEEEDEEEDVGTSEAKEEGEEQMEVTEVVREDEAQGKLQVESPEA
TVEEVGNVQKEEEQETENETQQDVVTDSQQTPESHMEIQPEECKEPQLDVPTPSVTEHDT
KQDDTAPETQQTQLEPDTEIPQEQSQEPSVQPQEAKVDTKEASEETDEARGRAKVRAKRS
KSRSSSSSSSSSSSSSSSGSSSSSSGSSSSSSGSSSSSSSSRSRSRGRDRDGRDHKRHRR
PSDRERRKSGSERGHKSSKGSGRESKGSKDKNSKPDRKRTSSEGSRSGRRSSRNERDRKS
DRKDRR
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggcggtggtcgtgcgaagtttgcaagaccagctggaaaaagccaaggaaagcttaaag
agcgtggacgaaaatattcgaaaactaaccggcagagatccgagcgaattaagaccgggt
caaaataggagacttaccatcacaggcccaggtggaggtagggggcgtggaatcaatttg
ctgaggcgtgcactctcagatagtggtggaggacccccagccaaacagagagacatcgaa
ggggcactcttgaggctggcaggggttcagcgagccaggagagattcacgccatgacagc
gacgctgaggatgatgacgatgtcaaaaaaccagcgttgcagtcatctgtggttgctacc
tccaaagaacgtacgcgccgagatcttattcaagatcagacaatggatgagagaggaaag
cagagaaaccggcgcatgtttggcctattgatgggaacattgcaaaagtttaagcaggag
tctactgtgtccacagagcggttaaaaagacgccaagaaattgagcagaaattggaagtg
caggcagaacaggagcgtaaaaaagttgagagtgaaaggagagagctctttgaagaaaga
cgtgccaaacaaacagagctgcggctgctggagcacaaagtggagctcgctcaactgcaa
gaagagtggaatgcacataattcaaagctcatcaagttcattcgcacgaagaccaagcca
ccaatcttctacctgcccgggcgaatgtgctccgctactcaaaagctcctggaggagtct
cagaaaaaattaaatggtgtgtttgatgagagacgtgaagcctttgcagagcaactcaac
aaaatggaggctcggccaaggcgtcagtcccagaggacaggtgacagagaaatggaggat
agccgtcgggctgaagagacgaagaaagaagatcaagaggagggtaaggttggagtaggg
cggacaggtaacaggcatgatgtggagatggaggacgaggaggaagatgtagtcgaggag
gaaggagaggagagctcagagattagggagagggaggggaatcaagagcaggagcagagt
gagaaggataaacacgaggagagtgagcagaaggcagaggaggaagatgaggaggaggac
gaggaggaggatgtaggaacaagtgaggctaaggaagagggggaagagcagatggaggtt
acagaagttgtgagggaagatgaggcacagggtaagttgcaggttgagagtccagaagcc
acagttgaagaggtaggtaatgtgcaaaaggaggaagagcaagagaccgagaacgagact
cagcaggacgttgtaacagactctcagcaaacccccgaaagccacatggaaatacagcct
gaggagtgtaaagagcctcaactggacgtcccgacccctagcgtgacggaacatgacacc
aaacaagatgacacagcgcctgagacccaacagacacagcttgaacctgacacagaaatc
cctcaagagcaaagccaagaaccatcagtccaaccacaagaagccaaggtagacacaaag
gaagctagcgaggagaccgatgaggctcgtggacgggccaaagtccgtgccaagaggagc
aagagccgaagtagcagttcttcttccagttcctcttcaagctcctcctccagtggatcc
agctcctcttccagtggctccagtagcagttcctctggctcctcctcgtcgtcttccagt
tcacgctcccgtagtcgcggcagggatagagacggccgagaccacaaacgccaccggaga
ccgtcggacagggagcgcagaaagagcggcagtgagagaggacacaagtcctcaaaaggc
agtggacgagaaagcaagggctccaaagacaagaactccaaacctgacaggaagaggacg
agttcggaaggaagcaggtcagggaggaggtcctccagaaacgagagggatcggaagtct
gatcggaaggatcggcgttga

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