Sinocyclocheilus rhinocerous: 107729642 Help Entry 107729642         CDS       T04916                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism srx  Sinocyclocheilus rhinocerous Pathway srx04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:srx00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     107729642  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:srx00536]     107729642 Glycosaminoglycan binding proteins [BR:srx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107729642 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  107729642 NCBI-ProteinID:  XP_016395763 LinkDB All DBs Position Unknown AA seq 1838 aa AA seqDB search MERPRWSPMWKTKRWLLDSTVFKFITVSLVLVLQAPNVRAAEPVDVLKVLEIHTIPEGVQ KTSGFCTNRRASQPDTAYKIGKNAQISAPTKQLFPDGVFPEDFSILTTIKPKAGIQSFLL SIYNEKGVQQLGVEVGRSPVFLYEDQTGKPAPEDYPLFRSLNLADGKWHRVGISVEKKTV TIVVDCKKKLTKTLGRSDHAGIDTNGITIFGTRILDEEAFEGDIQQLLIVADPKAAYDYC ENYSPDCDVPHKDTLQAQEPGEEYTTAVEYGDLYDYYEGATPTSTDEYSEPQPNNVDGEY YTDSELDYRTVDASQTQSPVATTGPNQAVEEEVFSDYVTETAQAGLDPTAAPEAALPSGT ADPIRVDAYDFKEYDLKEYDVTGLDKNQYEYGAYDEFGNVAPNPTSAYEDSFGPGVAAEK DIAETEVTSDVSIDPPNEGVVQYSDCWIWESSMHCWLCSALFRMGSIHFFCSVRWFILIF LYWISVKLLIYPFSLSLPLFLLPQGPSGRAGLPGADGLPGPPGTMLMLPFRFGGDGEKGP VVSAQEAQAQAILSQARLAMRGPSGPMGLTGRSGPVGLPGSPGLKGESGDHGPQGPRGIQ GPPGQMGKLGKRGRAGTDGARGMPGESGSKGDRGFDGLPGLPGEKGHRGENGPPGSHGPH GEDGPRGEDGEIGPRGLAGESGPRGLLGPRGPPGVPGQPGIAGVDGPHGPKGNMGPQGEP GPPGQQGIPGTQGLPGPQGPIGPPGEKGPQGRSGLPGLPGADGPPGHPGKEGPPGEKGAL GQTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEFGLAGPR GEDGPEGPKGRAGPNGESGPLGLAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEK GARGVAGKSGPRGQRGPTGPRGARGARGPTGKLGPKGTAGNDGPPGPPGERGPQGPQGAV GFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGPE NQGCPPGEQGLPGAGGKEGAKGDPGPLGSPGKDGPPGLRGFPGERGLPGVTGPPGLKGAE GPQGPPGPVGSPGERGAAGPAGPIGLSGRTGPQGPPGPAGEKGAPGERGPPGPAGRDGVQ GPVGLPGPAGPQGPPGEDGDKGEVGEPGQKGSKADKGEQGPPGPPGLQGTIGAPGPTGAD GEPGPRGQQGMFGQKGDEGSRGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPR GPQGPPGADGPQGPPGGIGGMGSVGEKGEQGEAGNPGPPGEPGPGGPKGERGEKGEAGPP GAAGPAGPKGPPGDDGPKGNPGPVGFPGDPGPPGEPGVAGIDGGPGEKGEDGESGQPGPP GPSGEAGPPGPPGKRGPPGASGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPPGKPGPE GLRGIPGPVGEQGLPGAPGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQ GEKGDRGLPGPQGTAGSKGDSGISGASGPIGPSGPPGLPGPQGPKGSKGSSGPAGQKGDT GSAGPPGPPGPPGEIIQPLPIQMPKKSRRSIDMQADEAGTMLDYGGGMEDIFSSLNNLKQ DIERMKYPMGTQNNPARSCKDLLLAHPEFSDGEYYIDPNQGCPGDSFKVYCNFTAGGETC IFPDKKSNGVRISSWPKEVPGSWFSEFKRGKILQYVDAEGNSINMVQMTFLKLLTASARQ NLTYSCHQSVAWHDATTDSYDRALRFLGSNDEEISYDNNPFIKALSDGCAVRKGYGKTVL EINTPKIDQVPIIDVMFTDFGDPNQKFGFEVGPVCFLG NT seq 5517 nt NT seq  +upstreamnt  +downstreamnt atggagaggccaaggtggtccccaatgtggaaaacgaaaaggtggcttttggattccact gttttcaaattcatcacagtttccctcgtcctggttctgcaggctccaaatgtcagagca gcagaacctgtggatgtcctaaaagtattagaaattcacactatcccagaaggagtacag aaaacttcaggattttgcacaaaccgaagagcatcacagccggacacagcctacaaaata ggcaagaatgcccagatcagtgccccaaccaagcagcttttcccagatggtgtgttccct gaagacttttccatcctaaccaccatcaagcccaaagctggaatccagtccttccttttg tccatctacaacgagaaaggcgtccagcaactaggcgtggaggtgggccgttcacctgtc ttcctgtacgaggatcagacaggcaagcctgccccggaggattaccccctgttccgctcc ctcaacctagccgacggaaagtggcatcgtgtaggcatcagtgttgagaagaaaactgtt accatcgttgttgactgcaagaagaagctgacaaagactttgggcaggagtgaccatgct ggtattgacaccaatggtataaccatttttggcaccaggatcctggatgaggaagcgttt gagggtgatatccaacaactgctgattgtggccgaccctaaagcagcttacgactactgt gaaaactacagcccagactgtgacgtcccccacaaggacacactgcaagcacaggagcct ggagaggagtacacaactgctgttgaatacggtgatttatatgattattatgagggagcg acccccacatcgacagatgaatattctgagccgcagcctaacaatgtagatggggagtac tatacagacagtgaacttgactacagaacagtagatgcttcccaaactcagtctcctgtc gcaaccactggaccaaaccaggctgtggaagaggaagttttcagtgactatgtcactgag acagcccaggctggtctggatccgaccgctgccccagaggccgcgctgcccagcggcact gccgaccccatcagagtggacgcgtatgactttaaggagtatgatcttaaggaatatgat gtgactgggcttgacaaaaatcaatatgagtatggggcgtacgatgagtttggcaatgtg gctccaaaccctacatccgcttatgaggacagttttgggccaggggttgccgcagaaaaa gacatcgctgaaacagaagtgacgtcggacgtaagtattgaccccccaaacgagggtgtc gtccagtactcggattgttggatatgggaatctagcatgcattgttggctttgtagtgca ctatttcgcatggggtccatccattttttttgttcggtgcgttggtttatacttatcttt ctctactggataagtgtcaaattactgatttatcccttctctctttctctcccgctcttc ctgcttccccagggtccttccggccgtgctggtcttcccggagcggatggcttgccaggc ccccctggtactatgctgatgctgccattccgttttggcggtgatggggaaaagggtcca gtggtgtcggctcaagaagcccaggctcaggccattctttctcaggccaggctcgccatg agaggtccatcaggtccaatgggtctcactggaagatctggcccagtgggtcttccaggt tctcctggactgaaaggagagagtggagaccatggtcctcagggtccgaggggtatccaa ggcccaccagggcaaatgggaaaacttggcaagagaggtcgtgctggaaccgatggggcc cgtggaatgcctggagaatctggatctaagggtgacagaggttttgatgggcttccaggt ctgcccggtgagaagggacacaggggtgagaacggtcctcctggttcccatggacctcac ggagaggacggaccaaggggagaagatggagagattggaccaagaggacttgctggtgaa agtgggccgcgaggtctgctcggccctagaggccctcctggagttcctggacaacctggc attgctggtgttgatggtccacatggtcccaaaggaaacatgggaccccagggagagccg ggccctcctggtcaacagggaatcccaggaacacagggtcttccaggtccacagggcccc atcggaccgcctggagaaaaaggtcctcagggaaggtctggtttgcctggattgcctggc gcagatggacctcctggccatcctggtaaagagggtccacctggagagaaaggagctttg ggccagaccggtccccagggccccatcggctatcctggccctcgcggtgtgaagggtgct gatggcgtccgtggactgaagggaggcaaaggagagaagggcgaggatggtttcccgggt ttcaagggagacatgggtctcaaaggcgacaggggtgaatttggattggctggacccaga ggtgaggatggaccagagggcccgaagggtcgtgcgggtcccaacggtgaatctggaccc ctgggacttgctggagaaaagggcaaacttggtgttccgggattgcccggctatccagga cgtcaagggccaaagggttcgaccggtttccccggattcccaggagccaacggagagaaa ggagccaggggagtggcagggaaatctggtccaagaggtcaaagaggtccgacgggtccc cgtggtgcacgcggtgccagaggcccaacaggaaagctaggccctaagggaacagcgggc aacgacggtccacctggcccacccggcgagagaggacctcaagggccccagggtgccgtt ggtttcccaggaccgaagggcccccctggaccacctggaaaggatgggctgcctggtcac cctggccagcggggagaaactggtttccaaggcaaaactggcccaccaggacctggaggt gttgtcggaccacagggtccaacaggagaaaccggtcctattggtgagagaggaccagag aaccaaggttgtccccccggagagcagggtctcccaggtgctggtggaaaagaaggtgca aagggagatccaggtcctctgggcagtccaggaaaagacggtcctccaggactgagaggg ttcccaggagagagaggtcttcctggagtgacgggtccacctggtttgaaaggagccgaa ggccctcagggcccccctggtccggttggttcccctggtgagagaggagcagcaggacct gctggccccattgggttgtctggacgtactggaccccagggacccccgggacctgctgga gagaagggtgcaccgggagagagaggtcctccaggtccagccggtcgggatggagtacaa ggtccagttggtctgccggggccagcaggacctcagggtccacctggagaagatggtgac aagggagaagtgggcgaaccaggccagaagggaagcaaagccgacaaaggtgaacagggt ccaccaggtccacctggtcttcagggaactattggagctcctggacctactggagctgat ggtgaaccaggtcctcgtggacagcagggtatgtttggacagaagggagatgaaggatcc cgaggctttcctggacctcccggtcccatcggtctgcagggtcttcctggaccacctggt gagaaaggagaaaatggagacgttggtcctatgggtccacctggcccacctggtcccaga ggtcctcaaggtcctcctggtgctgatggtccacaaggtcctcctggtggaataggagga atgggatctgtgggtgagaagggtgagcaaggagaagctgggaaccctggacctcctggc gagcctggacctgggggcccaaaaggtgagagaggagagaaaggtgaagctggtccccct ggtgctgctggacctgcaggtcccaaaggaccccctggagatgatggacccaagggtaat cctggccctgttggttttcctggagacccaggtccacccggtgagccaggtgttgctgga atagatggaggcccaggagaaaaaggcgaggatggagagtctggtcaacctggacctcct ggtccttctggagaagctggcccaccaggacctcctggcaaaagaggacccccgggggct tctggagctgaaggcagacaaggagagaagggcgccaagggtgaggcaggagctgagggt ccaccaggtaaaactggaccagttggccctcaaggccctcctggaaagcctggtcctgaa ggtctacgtggaatccctggtcctgtgggtgaacaaggacttcctggtgctcctggacaa gacggccctcctggaccaatgggtcctcctggtctccccggcctgaaaggagaccctggc tctaagggtgagaagggtcaccccggtcttatcggtctcatcggaccccccggtgagcag ggagagaagggagatcggggtttgcctggtcctcagggcactgctggcagcaagggtgat tcgggtatcagtggtgcttctggtccgattggtccatctggtcctcctggattgcctggt ccacaagggccaaagggatccaagggttcgtctggtcccgctggtcaaaagggagacacc ggctcggccggacctcctggtcctcctggtcctcctggtgagatcatccagcctctgcct atccagatgcccaagaagtcccgtcgctccatcgacatgcaagcggacgaggccggcacc atgctggactacggagggggcatggaagacatcttcagctccttgaataacctcaaacag gacatcgagcgcatgaagtaccccatgggcacgcaaaacaaccccgcacgaagctgtaaa gacctactgctcgctcacccagaattctcagatggtgaatactacatcgatcccaaccag ggatgccccggggactccttcaaagtgtactgcaacttcacagcaggaggcgagacctgc atcttccctgataaaaagtcaaatggagtgaggatatcttcatggcccaaagaggttcct ggctcctggttcagtgaatttaagcgtgggaaaatacttcaatacgtggatgcagaaggc aactcaataaacatggtccaaatgacgtttctcaaactactgacagcctccgccaggcaa aacttgacctacagctgccaccagtcggtcgcctggcacgatgccactacggacagctat gacagagcactacgcttcctcggctccaatgacgaggagatctcatacgacaacaacccc ttcatcaaggccctgtcagacggctgtgcggtgaggaagggctacggaaagacggtactg gagattaacactcccaagatcgatcaggttccgatcatcgacgtgatgttcactgacttt ggggatcccaaccagaaatttggattcgaagttggtccagtctgcttccttggctaa

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