Sinocyclocheilus rhinocerous: 107729830
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Entry
107729830 CDS
T04916
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
srx04121
]
107729830
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107729830
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107729830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
107729830
NCBI-ProteinID:
XP_016396021
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MASGCHSIQTMEHDYFDCPEYVASTQAEVDRAVEFECEEVELCRMNSQEKLGLTLCYRTD
DEEDIGIFVGQVELNSIAARDGRIREGDRILQINGHDVQNKEEAVALLSNENSRSIVLLV
TRPEGQMDGSWLDEDHQDFLEELKMEILEEQKKEGILQTAGCVKRSKRYEDASASTDTAT
CSSTILEKDSGIKCSFEDSSEHELLSHPQTRTQKQLRDRWEAGSHLVPMDTVCLTRQEKG
QEGRLSENGVECDHFQQLLELKCQIRNGGECGLVYRRSSTIECSLTEQGGSGVARELHML
NEELRSIERECQSIMQAHQLRRSKHDSPRTDKESRLRRGKLADINEHPERLQSEKLRDKD
SSSAYNTAESSRSTPPGTECSPDHSLQRRVHLTNQRNLRSTQQLQSPYSSPILSLPSQSS
PICSRAHTYTSSTPPLQTPITSPGSQGPSQAFSSSLEQSPSNPSESDPALPADDERCEKE
RNRNRVATARPYHSPYHSNTTTQPPSTRHYQSYLQLLQQHSSSSLECSQSQLSLLSLRGR
PGPTPPGRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAVSELKM
GRYWSKEERKQQLARAREQRRRREFMQRSRLECLGETMGTASGEVSILELSHKKMLKKRN
KKILDNWMTIQELMSHGARAPEGTKVHNAFLSVTTV
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggttgtcattccattcagactatggagcatgactattttgattgtccagaa
tatgtggccagtactcaggcagaggtggacagggcagttgaattcgagtgtgaggaggtg
gagctctgtcgaatgaacagccaggaaaagctgggtcttactctctgttaccgcactgat
gatgaggaagatataggcatttttgttggccaggtcgagctcaacagcatagctgcgagg
gatggacgcatcagagagggagacagaattttacagataaatggtcatgacgtgcagaac
aaggaagaggctgtcgcgctcctctcaaatgaaaattccagatctatagtgttacttgtc
accagacctgaaggacagatggatggaagctggcttgatgaggaccatcaagatttccta
gaggagctgaagatggagattttagaagaacagaaaaaagagggaattcttcaaacagca
ggttgtgtaaagcggtctaaaagatatgaggatgcctcggcaagtactgatacagcaaca
tgttcctctaccattctggagaaggacagtggcataaaatgcagctttgaggacagctct
gaacatgaattgctctctcatccccaaacacggactcaaaaacaacttcgggacaggtgg
gaagcgggctcgcatttggttcctatggacaccgtttgcttaaccaggcaggagaagggt
caggagggcaggttgagcgagaatggggtggagtgtgaccattttcagcaactactggag
ctcaagtgccagatccgtaatggtggagaatgcgggttggtctacagacgaagcagtact
attgagtgcagcctgacggagcagggcggaagcggagtggcacgggagctgcacatgctc
aacgaagagctgcgcagcattgaacgtgagtgccagagcatcatgcaagcccaccagctg
cgcaggagcaagcacgactctcctcgaacggataaagaaagtcgactgcgtcgtggcaag
cttgcggatattaacgagcatcctgagagactacaaagtgaaaagctcagagataaagac
agctctagtgcctacaatacagctgaaagttcccgttcaactccaccgggaacagaatgt
tcaccagatcactctctacagcgtcgagtccatctgaccaatcaaaggaaccttcggagt
acccaacaactgcagagtccctacagtagtcccatcttgtcattacccagccaaagtagc
cctatttgcagtcgtgcccatacatacaccagctccacaccacccttacagacccccatc
accagtcctggttcacaaggacccagtcaggccttctccagcagcttggagcaaagcccc
agcaacccttcggaatcagacccagcgcttccagctgatgatgagcgctgtgagaaagaa
agaaaccggaatagggttgcaactgctcggccttaccattcgccctaccacagcaacacc
acaacccagcctcccagcacacgacactaccagagttacctacagctcctacaacagcat
tcctcttcctctcttgagtgctcccagagccagcttagcctcctcagcctccgtggacgg
cctggtcccacgccacctggccgacttgaatggaaggtcaaagtgcgagcagacggaacc
aggtatgtggcacgtcggcccgcacgagaccgcatcctgcgcgaacgagccttacggatc
cgggaggaacgcagcggtgggatgactacagatgacgatgcagtcagcgagttgaaaatg
ggtcggtactggagtaaagaagaacgcaagcagcagctagcacgggctagagaacagcgg
cgcaggagggagttcatgcagaggagccggcttgagtgcctcggggagaccatggggacg
gcaagtggagaggtcagcatcctggagctcagccataagaagatgctgaagaaacgaaac
aagaagatccttgacaactggatgaccattcaagagctcatgagccatggagcacgagca
cccgagggcaccaaagttcacaatgccttcctttctgtcaccacagtttag
DBGET
integrated database retrieval system
