Sinocyclocheilus rhinocerous: 107730674
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Entry
107730674 CDS
T04916
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107730674
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107730674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
107730674
NCBI-ProteinID:
XP_016397027
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MFVILLLLCLADGVVSQIRYSVPEEAEHGTFVGNIAEDLGLDLTKLSSRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDRERICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQALHRYVLTAVDGGQPPRTGTALLVVRVLDSNDNVPVFDQPVYSVNLAE
NAPVGTLIIQLNATDSDEGPNGEVIYSFSNHISSRIKELFDIDARTGRIEVRGEVDFEES
SLYQIYVQAKDMGPNAVPAHCKVLVKVTDVNDNAPEIIFSTVTESVSENAATGTVIALLS
VTDKDSEDNGQTHVEILGDVPFKLKTSFRNYYTIVTDGPLNRETVEAYTVAVVARDKGIP
SLATSKSIKVHVSDENDNAPTFTQPIYDVYVTENNVPGAYIYAVSAVDPDVGQNAYITYS
IVECEIQGMSVVTYVSINSENGYLYALRSFDYEQLKDFSFMVQARDSGSPELWSNATVNV
IIVDQNDNAPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSVKRDPQQLYELLIEVRDHGQPPMSCSAVVQVTLVDSIVE
GHSGERGTAKAKDASLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLKIYSTCLASD
CCCLVGCGSCGSGGCCGRQARAARKKKKLSKSDIMLVQSTNTANVSVASAAQVPVEESGS
FGSLHQSQNYCYQVCLTPESAKTDLMFLKACSPSRSNDTEHNPCGAIVTGYTDQQQPDII
SNGSLLSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDAMHR
GHSSGADLFSNCTEECKALGHSDRCWMPSFVPTEARQGADYRSNLHVPGMDSVPDSEVFE
GETLAGDQSFSTFGKETPHHPNQMHQHQHQHHQHHLNASTLERKEFDALLCNSRMPYKAT
CLSRKRIC
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgattttgctcctgctgtgtctagcggatggtgtagtttcgcagatacgttac
tctgtgccagaggaagcggagcatggcacgtttgtggggaatatcgcagaggatttggga
ctggaccttacaaaactttcatctcgccgctttcaggtggtgcccagctcgcggacgcca
tacctggaagtaaacttggagaacggggtgcttttcgttaacgagaaaatcgaccgggag
cgcatctgtaagcagagcgccagctgtttgcttcacctggaggtgttcctggagaaccca
ctcgagctctttcgtgtggagatagaggtggtggacatcaacgacaacccgccgagcttt
ccggagacagacatcaccgtggaaatatccgagagcgcgaccccgggtacgcgcttcccg
ttggagagcgcctttgatccggatgtcggtagtaacgcattgcgcacgtacgacatcacc
accaacaactatttctacctagacgtgcaaacacagactgacggcaacaaattcgcagag
ctggttttagaaaagccacttgatcgggaacagcaggcgttgcaccgttacgtcctcacg
gccgtggacggcggccagcctcctcggacaggtacagctctgcttgtggtcagagtgctc
gactccaacgacaacgtccccgtgtttgatcagccggtgtactcggttaacctggccgag
aacgcgcccgtgggcacgctcatcatccagctgaacgcgaccgactcagacgagggcccg
aacggagaggtaatttactcgttcagcaaccacatctcaagcaggatcaaggaactgttc
gatatcgatgcccgaacgggccgtatagaggtcagaggtgaggtggactttgaggagagc
agcctgtatcagatttacgtgcaagcgaaagacatgggacctaatgccgtgcccgcgcac
tgtaaagttttggtcaaagtgacggacgtgaacgacaacgcaccggagatcatcttcagt
accgtcacggagtcagtgagcgaaaacgcagccacgggcaccgtcatcgcgctgctcagc
gtcacagataaagactctgaagacaacggccagacgcatgtggagattctcggagatgtt
ccttttaaactcaaaacctctttcagaaattattacactattgtgactgacggtcctctc
aaccgagagactgtagaggcgtacacagtcgccgttgttgcgagagataaagggattcca
tctctggctaccagcaaatcaatcaaagtgcacgtgtctgacgagaacgacaacgcgcca
acgtttacgcagcccatttatgatgtgtatgtgaccgaaaacaacgtccccggtgcttac
atctacgctgtcagtgccgtcgaccctgatgtcggacagaatgcttatataacttactcc
atagtggagtgtgaaatccagggcatgtctgtggtcacgtatgtgtccatcaactcggag
aatgggtatctgtacgccctcagatcgtttgattatgagcaactaaaagacttcagcttc
atggttcaagccagagactcaggcagccccgagctgtggtccaacgccacagtaaacgta
attatagtggatcagaacgataacgcgccgtctgtgattgcgcctcttggaaaaaatggc
actgcgcgggagcctttgccgcgctctgccgagccaggttacctagttactcgcattgtc
gccatggatgcagatgatggagagaacgcacgcttgtcatacagtatacagagaggcaac
gagaatgggatgttccgaatggactggcgcaccggggagttgcgcacggcccgccgggtg
tcagtcaagcgagacccgcaacagctatatgagctgctgattgaggtaagggatcacggg
cagcctcctatgtcgtgcagcgcggtggtgcaggtgacactagtggacagtatcgtggag
ggccacagtggagagcgcggcacggcaaaggccaaagacgcgtctctggacttgacgctc
atcctcatcatcgcactcggctccgtttccttcatcttcctccttgcaatgattgtgctg
gccgtgcgctgtcagaaggacaaaaagctgaaaatctacagcacctgcctggcgagcgac
tgctgctgcctggtgggctgcggatcgtgcgggtcaggtggctgctgcggtcgtcaggct
cgggccgcccgtaaaaagaagaaactgagcaagtcagacatcatgcttgtccaaagcacc
aacacagccaacgtgagcgtggcgagcgccgcacaggtgcccgtggaggagtcagggagc
ttcggctcgctccatcaaagtcagaactactgctaccaggtctgtctgactccggaatcg
gccaaaacggacctcatgttcctgaaggcctgcagcccgtcgcgcagcaacgacaccgag
cacaacccgtgcggagccatagtgaccggctatacggaccaacagcagccggacatcata
tccaacggcagcctgctctccagtgagacaaaacaccagagagcagagctcagttatttg
gtagaccgaccaaggcgtgttaacagctctgcattccaggaggcagatatcgtgagctca
aaagacagcggccatggagacagcgagcagggagacagcgaccatgatgccatgcatcgc
ggacattcctctggagcagacctgttttccaactgcacagaggagtgcaaagccctcggc
cactcagatcgctgctggatgccaagtttcgtgcccaccgaggcacgacagggcgccgat
taccgcagcaacctgcacgtgccgggcatggactctgtgcccgactctgaggtatttgag
ggcgagacgttggcgggcgatcagtcattctcaacgtttggcaaagagacgccacaccac
cccaaccagatgcaccaacaccaacatcaacaccatcaacaccacctcaatgcttccacg
ctagagaggaaagagttcgatgcacttctgtgtaactctcgcatgccttacaaagccacc
tgtctgtcgcggaaaaggatatgctag
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