Sinocyclocheilus rhinocerous: 107730759
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Entry
107730759 CDS
T04916
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107730759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107730759
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107730759
Spliceosome [BR:
srx03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
107730759
Complex B
107730759
Complex C
U2 SnRNP specific factors
107730759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
107730759
NCBI-ProteinID:
XP_016397176
UniProt:
A0A673ICU8
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MNWNKGGPSGKRGFGFGGFSLASGNKEEPRLPQKAHSAFGASGPSGGYGKNQQLSSFYKI
GTKRANFDEENAYFEDDEEESSSTDLPYIPAENSPTRKQFQSGGGGGGSDSEDDPLDAFM
AEVEDQAAKDMKKLEEKEKEKKLTKGIRDDIEEEDDQEAYFRYMAENPTAGLTQEEDEEE
VDYDSDGNPIAPTTKKIIMPLPPIDHSEVDYPPFEKNFYIEHEELSSLTEAGVVELRMKL
NLKVSGAVPPKPATSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMIGIAKT
GSGKTAAFIWPMLVHIMDQKELEQGEGPIAVIVCPTRELCQQIHSECKRFGKVYGLRSVA
VYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMGFEY
QVRSIASHVRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDVTQIVEVLQ
SGQEKWGWLTRRLVEFTSAGSVLVFVTKKTNCEELATNLNQEGYSLGLLHGDMDQSERNK
VIADFKKKNLPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAY
TLLTTKDTSFAGDLVRNLEGANQSVSKDLIDLAMQNPWFRKSRFKGGKGKKLNIGGGGLG
YRERPGLGSESTERSSSGGAALGNYEAYKPSTGAMGDRMSALKQAFQPQYKNHFVAASGV
PPKLTTKSSSSSGWTSAGSLSSLPSEAPEGPDRTHLSYPPSSSSSFSSMPPPPALSSGTK
MSGFSSAGSLSSVSDSYSSSSSKERSRSDRNAEDRGSHRDRESHYRHGDRHSGGDRDRYG
ERDRHSDRERHSDNRNGEGSHRDKEGRSERDGGERSGTHKDSFAVPDPPKRKKSRWDN
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaacaagggaggcccgagtggcaagcgagggtttggattcgggggattctct
cttgcgagtgggaataaagaggaacctcgtcttccccagaaggcccattctgcatttgga
gcttcaggaccatcaggtggatatggcaagaatcaacagctttcgtctttttacaaaata
ggaacaaaacgagccaatttcgacgaggagaatgcttattttgaggatgatgaagaggag
tctagcagtacagatctgccatatattcccgccgagaactcccccacaagaaagcagttc
cagtctggaggaggaggaggaggttccgacagtgaggatgaccctcttgatgcttttatg
gctgaggtggaggaccaagcagcaaaggacatgaagaaacttgaggaaaaggaaaaagag
aaaaagttgaccaagggtatacgggatgacatcgaagaggaggatgaccaagaagcatat
tttcgttacatggcggaaaacccaacagctgggctgacccaagaggaagatgaggaagaa
gtggactatgacagcgatgggaaccccattgctcctactacaaaaaagatcatcatgcca
ctgccccccatagaccactcagaggttgactatcctccctttgagaagaacttctatatt
gagcatgaggaactcagcagtctgactgaggctggagtggtggaactgagaatgaaactc
aacctgaaggtttcaggtgcagtgcctcctaaaccagccaccagttttgctcactttgga
tttgacgagcagctcatgcaccagatccgtaaatccgagtacactcaacccacacccatc
cagtgtcagggtgttccgatagctttgagtggcagagacatgattggtattgccaaaact
ggcagtggaaagactgcagctttcatttggccaatgctggtgcacatcatggaccagaag
gagctggagcagggagagggacccattgctgtgatcgtctgccccaccagagagctctgt
caacagatccattctgaatgcaagcgtttcggaaaggtatatggcctccgctcagtggca
gtatatggaggcggcagcatgtgggaacaagccaaagcattacaggaaggagccgaaatt
gttgtctgcaccccaggtcgcctgatcgatcatgtgaagaagaaggctacatcactgcag
cgagtgacctacctggtatttgatgaagctgatcgcatgttcgatatgggctttgaatac
caagtgagatccattgccagccatgtcagacctgatcgacagacactgttattcagtgca
acatttcggaagaaaattgaaaagctggcacgagatattttggtcgaccccattcgtgtt
gttcagggagacataggagaggctaatgaagatgtcactcagatagtggaggtgctgcag
tctgggcaggaaaagtggggttggctgacacgtaggctggttgagttcacctcagctggc
tctgtgctggtctttgtcactaaaaaaactaattgcgaggagctggcaacaaatctcaat
caggagggttatagcctagggctgctgcatggagacatggatcagagcgagaggaacaaa
gtcattgctgactttaagaagaagaatctgcccgtattagtagctactgatgttgctgct
cgtgggttggatattccatctatccgtacagttgtgaactacgatgtagcacgagacatt
gacacacatacacatcgaattggtagaacaggtcgtgcaggagagaagggtgtagcttac
actctgctcaccactaaagacacttcatttgctggtgacctggttcgaaatttagaggga
gccaatcagagtgtttcaaaggatctgattgacctggcaatgcagaatccctggttcagg
aaatcccgctttaagggagggaaagggaagaagctaaatattggaggtggaggcctgggt
tacagagagagacctggccttggatctgaatccactgagcgcagtagtagtggtggagct
gctcttggtaactatgaagcctacaaaccctccactggagccatgggagaccgtatgtct
gccctgaagcaagcatttcagcctcagtataaaaaccactttgtggcagcatctggtgtt
cctcccaaactcaccacaaagtccagcagctcctccgggtggaccagtgcaggaagtcta
agttctttgccttcagaagcacctgaggggcctgacagaacccacctgtcctacccgcca
tcgtcctcttcctccttttcctccatgccgccgccccctgccctcagctcaggcaccaaa
atgagtggcttcagcagtgcaggctccctaagctcagtttcagactcttactctagctct
tcttcaaaagaaaggtcccgtagcgataggaatgctgaagacaggggtagtcatcgagat
cgagagagtcattatcgtcatggtgacaggcatagtgggggagaccgtgatcgctatggg
gaaagggaccgccatagtgacagagaacgtcatagtgacaaccgaaacggtgaagggagc
catagggacaaggagggacggtcagaaagagatgggggtgagaggtcagggactcataaa
gacagctttgcagttcctgatccccccaaacgtaagaaaagcagatgggacaattaa
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