Sinocyclocheilus rhinocerous: 107730863
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Entry
107730863 CDS
T04916
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107730863
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
srx04091
]
107730863
Lectins [BR:
srx04091
]
C-Type lectins
Lecticans
107730863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
TMEM154
Protocadherin
DUF2970
Motif
Other DBs
NCBI-GeneID:
107730863
NCBI-ProteinID:
XP_016397306
LinkDB
All DBs
Position
Unknown
AA seq
3137 aa
AA seq
DB search
MARSITEQRQRRAFHVHLFLFILTLCRDASAQGFQSLGLTYGLRSELSEDAILVANNGVR
VPFGRSVYIDPINDLVIQVQPGDKCTITVLDNDPLSQRPGQLSPKKFPCEFGPNDVKYSH
FGSRSPSNDRVRLQLRYDTQTDTVIIPFMMEVEVIFTQLEILTKHMPVFVEKLLGMSNPI
DKKILEFTYDRNANLCKVTYLASGSSLPRYGKLIDNGKLGKPVDCDEFVRMDIRYQHTFA
HRSPNRDYIPMYLELQDKEANVLKQEFFQIVVIIKEGEKNTAPKPSFVAMMMMEVDQFVM
TAITHDMLAAEDVESNPDDLIFNITSPLSFEEGYIVSTDDRNLPITSFYQADLKDLKIAY
KPPSVDSNVERIFQIEFEVIDTEGAMSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQSR
PLSSSQNLQISDEDNLDNVQITVINGLRHGELTVLGSRRKFFTPADLDVGSVIYQHDGSD
TYSDNIIFRMTDGKNEVEFLFPITVVPTDDEPPIINANTGLVLFKNQMMPISSLMLSAAD
IDSEDSTIKFIMVPPYSTIGEVILRQSDAPEDPSTWRFNAQDEMYEKVVTEWFQHDITEG
KLFYRHIGPHNTKTIMDQFVFHVQDDNDPPNQSGENSFIIKVLPIDDIPPELYPGTILQV
TVHEYQLTYFRKKFLRYTDLDSEDRDLKYTITKPPTDTDENSPGILGSIVLTESPNSEVT
EFTQAQINHHKIAYKPPDLELGITPHMVQFHFKVEDMVGNSANGVFTIFLQPVDNKPPQI
TNTGFTVQERGVHVITRAELDTTDADTDSSQILFTITQPPKHGQVKYTFTDMTKGNSFNL
DDISFGRISYIHNGDESTSDFFQLDVSDGVHVVTITVRINVKPIDDEAPTISLPEGTIGS
YIDVLENGVTEITTNVIQGRDEDTDDLRLTFIVEDPPVFGEVLVNGVPSNRFTQADIISG
LVIYAHNSGEIGLTTKYDFFNLTLTDMSDEWTVGGNKIKGVRVQVTILPLDSQAPEVFVG
LQFIVVEGEKNVIQISHISANDIDTPNDDLLCTIIVQPTSGYVENISPAPGSEKSRSGIA
ISAFTIKDIRENHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERLFFPIVIIPSNDEKPE
IHMREFVVMEGMNIVIDTPIINGADADIPADGLTFIISKLPKHGYILNQLTSGTIPVTNF
TLDQIQEASSIVYEHDDSETTEDSFDVLLTDGKFTVEKTVMIMIILVDDETPRMAINDGL
EIEVGEVKIIGNKVLKATDLDTEDSILTYIIRYGPNQGFLQKRTQFGALENITVGMNFTQ
NEVDQDMIVYIHNGQEGVRDLIKFDVTDGINPLIDRYFYVTVGGIDMVFPDVISKGVSLK
EGGRVTLTTDLLSTSDHNSPDEHLVFTITRAPIRGHLECTDVPGMPISSFTQLQLAGNKI
YYIHTADDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVVTIHGLVVNEGENKLIT
PFELTVEDRDTVDHLLKFTITQVPVHGKLLFNNTRPVTSFTKQDLNENMIRYKHDGTESA
SDSFSFTVTDGTHTDFYVFPDTVYATRKPQMMKIAIYPVDNGVPQVVTNKGGTTLRILPT
GHLGFLITSKTLKAEDRDSPHGAVTFKITVATEHGYLIDLGKGNATITTFTQADINDMHI
CYVLRDGDNATSDTFHFSIEDSGGNKLKNQLFRLNWAWISLEKEYCQVDEETKFLEMVLR
RRGYLGETSFVSIGTKDGTAEKDKDFRGKAQKQVQFNPGQTTATWKVRILSDSLYEQSET
FQIVLSEPVMGALEFPEAATVEIVDPGDESTVFIPLATYSIEENIGELLIPVRRSGDVSQ
ELMVVCFTQQGTAKGTVPTTVLSYSDYISRPEEHHSVLRFDKGETEKHCRVVVIDDSLYE
PEESFNVTLSMPMSGRLGQEFPTTRVTILPDADDAPVFYFGETEYHVDESDGYVEVRVWR
TGSDLSKTGTVTVRSRKTEPVSAEAGVDYVGISKNLDFSPGVNMQTFKVTILDDLGQPLL
EGPEKFELVLRMPMNGILGEPGKATIYINDSISDLPKVQFRDPSYTGNENDGQISALVYR
SGDLSYKSSVRCYSRQGSAQVMMDFNERPNTDVSAIVFLPGEVEKSCVLILVDDTEHEED
EELRLVLGSPKSESPFGASIGGQNETLIKIKDDADKAIIRFGAAKFSVSEPSESGQISVV
RIPVQRTGDTSKVSVVRVHTKDGSASSGEDYHPISEDVEFKEGETEHIVEVEILYDGVRE
MREAFTVHLKPDENMVAEIQVTKAIIYIEETNSMADVTFPAVPVVVSLLQYDDTSSTRDT
QPVAGYPVVCVTSCNPKYPDFDRTGSICVAEHINNTLTRYRWLVSAPTGPDGVTSPMKEV
DFDTFFTSSKTITLDSVYFQAGSRVQCAARAVNSNGDEGLELTSPIVSISQEDGMCQPRV
VGTVGAEPFSARLRYTGAEDPDHPNLIKLTVTMPHIDGMLPVVSTRALSNFELTLSPDGT
RVGNHRCSNLLDYTEVRTRYGFITDTTRNPDAIGGTAPYQYSTALRGQNTLRFYRNMHLE
ACLWEFVSYYDMSELLNDCGGTIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGAGGWQH
FDLQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTRMRINEQGRLVVNFRTEARFRG
LFVTAHSASPMTSMVMCADHPGLTFNLSLVRSEPTYNQPMQQWTFISDFAVRDYSGTYTV
KLVPCTAPPSIEYSFRPVCHPREPITFDLDIRFQQVSDPVSAEFSLNTQMVLLSKKTLWL
SDGSMGFGQESDTAFSEGDVIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYIPKYNPD
NFEYGCLADSPSLLYRFKIIDKAQPETQARTFGSISFNAFLAVDDPQALPLVRQPGSDGF
RLDSTALFQVSAGREWYIHTIYTVRSRDNANRGIGKRSLEYHSVTHGHSISKRSANRVPD
LAQDIGIENNRGTNILHIALDRSAQKHPNLHEESQAEGIVPRELNQRDSNDDRVVLIIGI
LVGLLFTILLVILVILVVRSRRDKNIAEPPKGSSSTEPMMTQGLDSNNSSERELVVLLLL
LLDDIDIHPNPVLHTEI
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atggctcggagtataacagagcagcgacaacgtagagcgtttcatgtgcacttgtttctc
tttatactgactttgtgtcgcgatgcatctgcacagggatttcagagtttgggattaacg
tacggtttaagatctgaactttcagaggatgctattcttgttgccaataatggagtacgg
gttcctttcggcagatctgtctatattgatccaatcaatgacctggttatccaagttcag
cccggagacaagtgcaccataacagttctggataatgacccgctgtcacagagaccggga
cagctgtccccgaaaaagtttccttgtgaatttggtcccaatgatgtaaaatactcgcat
ttcggatccaggagcccttcaaacgacagagtaagacttcagctcagatatgatactcag
actgatacagtcatcattccctttatgatggaagttgaggtgattttcactcagcttgag
attcttaccaaacacatgcctgtatttgtggagaagctgcttggaatgagtaatcctatt
gataagaaaatcctggagtttacttatgatagaaatgctaatttgtgtaaagttacatat
ctggccagtggcagctcattacccaggtatggaaagcttattgataatggaaaattaggg
aaacctgtggactgtgatgaatttgtcaggatggacattcgctatcagcatacttttgca
catcgttctccaaaccgagattatattcccatgtatttagagttacaagataaagaagca
aatgtactgaagcaagagtttttccaaatcgtggtcattataaaggagggtgagaaaaac
actgctcctaaaccgagttttgtagcaatgatgatgatggaagttgaccagtttgtaatg
actgctataacccacgatatgcttgccgctgaggatgtggaatctaatcctgatgattta
atcttcaacatcacttccccgctgtcctttgaggagggctacattgtgagcacagatgac
aggaatttgcccatcacgtctttttatcaagcagacctgaaagatcttaaaatagcctac
aagcctccctctgtggattcaaatgtggagagaattttccaaattgagtttgaagttata
gatactgagggggctatgtcagacccctttgcttttatgatagtggttaagcccatgaac
actctagctccggttgtgacccgtaacactggccaactgctttatgagggtcagtccagg
ccactgtccagctcacaaaacctacaaattagtgacgaggacaacttagacaacgtccaa
atcacagttattaacggccttcgccatggagagctcacggttctggggtccaggcgaaaa
ttcttcaccccagcagatcttgatgtagggagcgtcatctaccagcatgatggcagcgat
acgtacagcgataatattattttcagaatgacagatggaaaaaatgaagttgagtttcta
tttcccatcactgtggttccaactgatgatgaacctcccataatcaatgccaacacaggc
ttagttttgtttaaaaaccaaatgatgcccatttcttctttaatgcttagtgcagcagat
atagactctgaggattcaactattaaattcatcatggtgcctccatactctactatagga
gaagtgatacttcgtcaatcagatgcaccagaggatccatccacatggaggttcaatgcc
caagatgagatgtatgagaaagtagtgacagaatggttccagcacgacattacagaaggc
aagctgttttacaggcacatcggaccacataatacaaagaccatcatggaccagtttgtt
ttccatgtacaagatgacaacgacccaccgaaccaatcaggtgagaactcgttcatcatc
aaagttctccccattgatgatatccccccagagctgtatcccgggaccattctgcaagtg
accgttcatgagtatcagctcacctattttcgaaagaagttcttgcgctacacagacttg
gactcagaagacagagatttaaaatacacaattaccaagccacccacagacacagatgag
aacagccctggcattctaggaagcatcgttttaactgagagtccaaattcagaagtcacc
gagttcactcaggcacagataaatcatcacaagatagcctacaaacctcctgatctagag
ctcggaataaccccgcatatggtgcagttccatttcaaagttgaggacatggtaggaaac
agcgccaatggagttttcaccatatttttacagcctgttgacaacaagcctccccagatc
accaacacaggctttaccgttcaagaacgaggggtgcacgtcatcacacgtgccgagctg
gacaccacagatgccgacacggacagctcacagattctgtttacaatcacccagcctcca
aagcacggtcaggttaagtacacattcactgacatgactaaagggaattcatttaatttg
gacgatatatcttttggcagaatatcttacattcataatggtgatgagtcaaccagcgat
ttcttccagttggatgtcagtgacggtgtccacgttgtcacaatcaccgtcaggatcaat
gtgaagcctattgatgatgaagcaccaaccatcagccttccagagggtactattggctct
tacatagatgttttggagaatggagtgactgagatcaccaccaacgtcattcagggtcga
gacgaggacactgatgacctcaggctgacctttatcgtagaggatcccccagtgtttggt
gaagtattagtaaatggtgtgccctccaataggttcactcaagcagacatcattagtggc
ttggtaatatatgcacataatagtggagaaattggcttgacaacaaaatacgacttcttt
aatcttacacttaccgatatgtctgatgaatggacagttgggggaaataaaatcaaaggg
gttcgcgtgcaagtcaccattctgccgttggatagtcaggcccctgaggtcttcgtgggc
ctccaattcattgtcgtagagggtgagaaaaacgttatccaaatttcacatattagtgct
aatgacatcgacacccctaatgatgaccttctttgcacaattattgtacagcccacctca
ggctacgtagaaaacatctcccctgcaccaggctctgagaaatccagatcagggattgct
attagcgcgttcaccattaaagacattcgggaaaaccacatttattacgtgcaaagtatt
cataaaggtgtcgagccagttgaggacaggtttactttcaggtgttcagatgggataaac
ttttcagagagactctttttcccaatcgtgataatcccatccaatgacgaaaagccagag
atccatatgagagagtttgttgtgatggaaggcatgaacattgtgattgacactccaata
ataaacggtgctgatgctgacattccagcggatgggcttacgtttattatttcaaaactt
ccgaaacatggatatatcctcaatcagttaacctcaggcactattcctgtcacaaacttc
acactcgatcagatacaagaggcttcaagtattgtctacgagcatgatgattcagaaacc
acagaggatagttttgatgttctacttactgatggcaaattcacagtggagaaaaccgtc
atgattatgataattttggttgacgatgaaaccccaaggatggcgattaatgatggcctt
gaaatagaagtaggagaggtgaaaataatcggcaataaagttttaaaagccactgatctg
gatacagaagacagcattctgacctacatcatccgttatggaccaaatcaagggttttta
caaaagcgaacacaatttggagctctagaaaacattactgttggaatgaacttcacacaa
aatgaggtcgaccaagatatgattgtgtacattcacaatggacaagagggagttcgtgac
cttatcaaattcgatgttactgatggcattaaccctttgattgacagatacttctatgta
actgttggtggaatagacatggtgttccctgatgtgatcagcaaaggtgtttctctgaaa
gaaggaggaagggtgactctaaccacagacctgctcagcactagtgatcataacagcccc
gatgaacacttggtgttcaccatcacacgtgcccctatacgaggacacttagagtgcact
gatgtgccagggatgcccattagttcattcactcagcttcaactagctggaaataaaatt
tactacatccacactgctgatgatgaggtgaagatggacagctttgagtttgaggtgact
gatggctacaatcctgtgttccgcaccttccgcgtgtccattacggatgtggacaacaaa
aagcctgtggtcaccattcacggtctggttgttaatgaaggtgaaaataagttaatcact
ccttttgagttgacggtggaggaccgtgatacagtcgatcaccttttaaagtttacaatc
acccaggtgcctgtacacggcaagttgctgtttaacaacacccgacctgtcacttccttc
accaagcaggacctgaatgaaaacatgatacgttataagcacgatggaaccgagtctgcc
tccgacagcttctcgtttactgttaccgatggaactcacacagacttttatgtgttccct
gacacggtttatgcgactcgcaagccccagatgatgaaaatcgcaatttatccagtagac
aatggagttccgcaggttgtgactaataagggtggtacaacattaagaattctccctact
ggtcaccttgggttcctgatcactagtaaaacattaaaggcagaagacagagacagccct
cacggagcagtgacttttaaaattactgtggctactgagcatggctacctcattgacttg
gggaaaggaaatgccactatcaccacattcacccaagctgacatcaatgacatgcatata
tgctacgtgcttcgagatggagacaatgccacaagcgacacattccacttttccattgaa
gacagtgggggcaacaagctgaaaaaccaacttttccggctaaactgggcttggatctcc
ctggagaaagagtactgccaggtggatgaggagaccaagtttctggagatggtcttgaga
cgcagaggttaccttggcgagacctcatttgttagtattggtaccaaagatggtacggct
gaaaaggacaaagatttccgagggaaagcccagaaacaagtccagtttaacccgggtcag
accactgctacctggaaagtgcgcatcttgtcggacagcctgtatgagcagtccgagacc
ttccagattgtcctctcagagcctgtcatgggagcactggagttcccagaggcagcaacg
gtggaaattgttgaccctggagatgaatccacagtgttcatccccttggctacatattcg
attgaggaaaatattggagaacttctgattcctgtgcgaagatctggagatgtcagtcaa
gagctcatggttgtctgcttcacacaacaaggtacagccaagggcacggttcccaccacg
gtgctttcttattctgactacatttctcgacctgaggaacaccacagcgtgctgcgtttc
gataagggggagacggagaagcattgccgtgtggtcgtcatcgatgattcactctacgag
ccagaggaaagctttaatgtcaccctcagcatgcccatgagcggccgtctgggtcaggag
ttccccaccaccagagtcaccatcctgcctgatgcggatgatgcaccagtgttttacttc
ggagaaactgagtaccatgtggatgagagtgatggttatgtcgaagtccgggtttggaga
acaggaagtgacctttccaaaaccggaactgtcacagtacggtctcgaaaaactgagcct
gtttcagccgaagctggtgtggactatgttgggatcagtaagaacctagacttttccccg
ggcgtcaacatgcagacgttcaaggttacaatcctggatgacctggggcagccattgctg
gagggtccagagaagtttgagctggttctccgtatgcccatgaacggcatattgggtgaa
ccaggaaaagctacaatctacatcaacgactccatctcagatttgcccaaggtgcaattc
cgagatccttcatacacgggtaatgagaatgatggacagatatctgctcttgtgtaccgg
agtggagatttgagctacaaatccagtgtgcggtgctacagccgtcaaggctcggcccaa
gtcatgatggacttcaacgagaggccaaacacagacgtctccgccattgtctttttacca
ggagaggtggagaagtcttgtgtcctcatcctcgtggatgacaccgaacatgaggaagac
gaggagctgagattggtgctgggaagccccaagagtgagtctccttttggggcctctata
gggggtcagaacgagacactcatcaagataaaggatgatgctgacaaggccattatcagg
tttggagcagccaagttcagtgtcagtgaacccagtgagtcagggcaaatctcagtggtg
aggatcccggtccagaggacaggagacacatctaaagtgtctgtggtgcgggtccacaca
aaggatggctcggcttcctctggagaagattaccatcccatctctgaagatgtggagttt
aaagaaggagagactgagcacattgtggaggtggaaattctgtatgatggtgtgcgagag
atgagagaggccttcactgtccacctcaaacctgatgagaatatggtagcagagattcag
gtaaccaaagccatcatttacattgaagagacgaacagtatggccgatgtgacctttccc
gccgtgccagtagtggtgtctctcttgcagtacgatgatacaagcagcactagagatact
cagccagtcgcaggatatcctgtagtctgtgttacgtcatgcaaccccaagtatcctgac
tttgaccgaacgggctccatctgtgttgctgagcacatcaataacaccctgacccggtac
cgctggctggtcagcgccccgacaggacctgacggtgtgaccagccccatgaaggaagtg
gattttgacaccttcttcacttcctccaaaacgatcacattagactcagtgtatttccag
gcaggctcgcgtgtgcagtgtgcagcccgggctgtcaactctaatggggatgaaggcctg
gagctcaccagccccatagtctccatcagtcaggaagacggaatgtgccagcctcgtgtt
gttggcacagttggagctgagcctttctctgccaggctgcgctacactggagcagaagat
ccagaccacccaaacctcattaaactgactgttaccatgccacatattgacggaatgtta
cctgtagtctccactcgggcactctccaactttgagctgaccctgagtccagatggcaca
cgtgtaggaaaccatcgctgctctaacctgctggactacacagaggtgcggacacgctac
ggcttcatcacagacaccacccgcaatccagatgccatcggcgggactgcgccctaccag
tacagcacggccctcaggggccaaaacaccctacgattctaccgaaacatgcacctggag
gcgtgcttgtgggagtttgtcagctactatgacatgtctgaactgctcaatgattgcgga
gggaccatcggaacagatggacaggtgctgaacctggtgcagtcttacgtgaccctgcgt
gtgcccttgcacgtgtcatatgtcttccattcgccagtcggtgctggtggttggcagcac
tttgacctgcagtctgagctgcgtctcacttttgtttacgatactgccatcttgtggaga
gatggcattggtagtccaccggaggctgaattacaaggtgccctctatcctacaagaatg
cgcattaacgaacaaggccgtttggtcgtcaacttccgtacagaagcacgatttcgggga
ctctttgtcactgcacattcagcctcccccatgacttccatggtcatgtgtgcggaccat
cccgggctgacctttaaccttagcttggtgagaagtgagccgacatacaaccagccaatg
cagcagtggaccttcatctctgactttgctgtgagggattactcaggaacttacacggta
aaactggttccctgcacagctcctcccagtattgagtacagcttccgtcctgtgtgccac
cccagagagccaattacctttgatctggacatacgcttccaacaggtgagtgatccagtg
tcagcagagttcagtcttaacacacagatggtcctgctttcaaagaaaactctctggctg
tcagacggctccatgggctttggtcaggagagtgatacagctttctcagagggagatgtc
atctatggccgtgtaatggtggatcctgttcagaatcttggagactcgttcatctgtaac
attgagaaggtgttcctgtgcacaggggcagatggatacatcccaaaatacaaccctgac
aactttgagtatggctgcctagctgattcaccatctcttttgtaccgattcaagatcatt
gacaaagctcaaccagaaactcaggcgagaacatttggcagcattagtttcaatgctttc
ctcgctgtagacgatcctcaggcgctgccgctggtgaggcagccgggctctgacggcttt
aggctggattccacagctttgtttcaggtgtcggcaggcagggagtggtacattcacacc
atctacactgtccggtccagagacaacgctaaccgaggcatcgggaaaaggagccttgaa
tatcattctgtgacacacggtcactcgatttccaaaaggtcagctaaccgcgttccagat
ttggctcaggatattggcatagaaaataaccgcggcacaaatatcttacacatagcgctg
gaccgcagcgctcagaaacatcccaaccttcatgaggaatcccaagcggagggtatcgtt
cctagagaactgaatcaaagggactctaatgatgatcgtgttgtcttgatcataggaatc
ttggtaggtcttctcttcaccatcctcctcgtcattcttgtcattctggtggtacgatct
agacgggacaagaacatcgctgagcccccgaaaggctccagcagcacagagcccatgatg
acgcaaggccttgatagcaacaacagctcagagagagaattggttgtactactgttacta
ctgcttgatgacattgatattcatccaaatccagtgctccacacagagatctga
DBGET
integrated database retrieval system
