Sinocyclocheilus rhinocerous: 107730987
Help
Entry
107730987 CDS
T04916
Name
(RefSeq) autophagy-related protein 16-2-like isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107730987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107730987
03029 Mitochondrial biogenesis [BR:
srx03029
]
107730987
Membrane trafficking [BR:
srx04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
107730987
Others
Specific organelles associated proteins
Auto phagosome
107730987
Mitochondrial biogenesis [BR:
srx03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107730987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
ATG16
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
107730987
NCBI-ProteinID:
XP_016397431
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MIMAASQRARNSELKQSETWKRHIIRQLKYRNRTQTSVFQDLIESYHSLLEKSKQRALIT
KGILGSGSRPSLSEDSLTSLKTTTGELAYQVVELQQRIQLKEVTLDEQHTKLYEVQNHLS
VLASEHSVLQERVVEVQTRNRLLKQEYDSLLEQHQNMERTYRQEKLRSSEILENMIGPKQ
QAAVRMNHRNEKRVRAREASLHKELQMAASKNVNIEESGNVSPPKPSSPKRDSSQRLERS
HGPLFRSASATSPRIISSIRGLFERKMRGKSVCRSEEDLYIPLGVCLVARVPTKAIFTVD
AHELGINAVRFSTSSNLLATGGTDRVIKLWGIEAGTLQNRGTLDGSNEGITSIEFDPTGT
QILAASYDKSALFWRLEDSVPKVTLTGHSRKVTAARFKYSQRQVVTGSADRTVKIWDLQR
AACIQTIEVLSFCSDVVCSEYLIISSHYDRKIRFWDSRAGTCTQEVPLQGRVTSLDLCPN
HRQLLSCSRDDILQLVDLRKSNDRVAFRAEGFKCGSDSTKAIFSPDGSFLAAGSADGAVY
IWNVSTGNLEKRLPDMHRASISAVAWSLSGEYVVSVDKSRRAVLWSDI
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggcggcgtcgcagcgcgcgagaaactctgaactcaaacagagcgaaacatgg
aagcgtcacattatcagacagctgaaatatcgcaacaggacccagacgagcgtcttccag
gatcttatagagtcatatcacagtctgctggagaagtccaagcagagagccctcataacc
aaaggcattctgggatcagggtcaaggccctcactatctgaagattcgctgacatctcta
aaaacaaccaccggtgagcttgcataccaagtggtggaactgcagcagagaatccagtta
aaggaagtgacactggatgagcaacataccaagttatatgaggtccaaaaccatctcagt
gttttggcgtcagagcacagcgtgcttcaggaacgcgtggtagaggtacagactagaaac
cgacttctgaaacaagaatatgattctctgctggagcagcaccagaacatggagaggacg
taccgacaagagaaactccgcagctcagagatcctggagaacatgatcggtccaaaacag
caggctgctgtccgcatgaaccatcgcaatgagaagagagtgagagccagagaggccagt
cttcacaaagagcttcagatggctgccagtaagaatgtgaatattgaagagtcaggaaat
gtgtcacctcccaaaccatcatcccctaaacgtgactcttcacagaggttggagagatcc
catgggccacttttcaggtctgcttcagctacatctccccgcatcatcagctccatcaga
ggactttttgagaggaagatgagaggtaaatcagtttgcagatcagaggaagacctctat
attccattaggagtctgcctggttgccagagtcccaaccaaggcaatttttacagtggat
gctcatgagctgggaatcaatgctgtgaggttcagtaccagttcaaacctgctggctaca
ggaggaactgacagagtcatcaaactgtggggcattgaagcaggaactcttcagaacaga
gggacattagatggaagtaatgaggggatcaccagcattgagttcgacccgacgggcact
cagattttagctgcatcatatgacaagtcggctctgttctggaggctggaggacagcgtt
cccaaggttacattgacgggtcattctcgtaaagtgacagctgccagatttaaatacagt
cagaggcaggtggtcacgggcagtgcagacaggaccgtgaagatatgggacctccagcga
gcagcgtgcatacaaaccattgaggttttgtctttctgtagtgatgttgtgtgctccgag
tacctcatcatcagcagccattatgacagaaaaatacggttttgggacagcagggcaggg
acctgcacacaggaagtgcctcttcagggcagagtgacatcactggacctctgccccaat
cacaggcagctgctcagctgctccagagatgacatcctgcagctggttgacctgagaaag
agtaacgacagggtggccttcagagcggagggattcaaatgtggaagtgacagcaccaag
gccatcttcagtccggatggcagtttcctggcagctggctctgcagacggtgctgtctac
atatggaatgtgagcacaggaaacctggaaaaacggcttcctgacatgcacagagcttca
ataagcgcggtggcctggtcgttgtcaggtgaatatgtggtaagcgtggacaagagccgt
cgagctgtgctctggagcgatatctga
DBGET
integrated database retrieval system
